mRNA_H-elongata_contig10333.274.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10333.274.1
Unique NamemRNA_H-elongata_contig10333.274.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Match: A0A6H5K1C0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C0_9PHAE)

HSP 1 Score: 432 bits (1112), Expect = 5.700e-147
Identity = 245/383 (63.97%), Postives = 263/383 (68.67%), Query Frame = 1
Query:  202 MGNASSHTYAGAAPPPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRVDGVMVVVKAYIKRDPQEDLAPVEECLMKMAKDLDTRSCPNVLPYQRWLQSNVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFRSAPETAEAPTSGGGV---GAPAAAATDTAASKAKGCLDGGRTGVXXXXXXXXXXXXXXXXXXXLEGLEASEIRPSPSPGSSXXXXTPASGPSTPRTGTDPQTTPPRKQQHQSRQGGGRDDAGRAGRGGPAAVTERQALTPGEGLVESMDVFSLGCVIAEIFLGGD 1341
            MGNASSH Y GAAPPPAADARVILQHDLPKVIYVK+LANGKFIKSYQCRVDG+MVVVKAYIKRD +E LAPVE CL  MAK LDTRSCPNVLPYQRWLQS+VRAS HR AGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHG+G+ HGDIKSENVLVTSGNW+LLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERF S P+ ++A T+G G    G            +A+G + G                     XXX  GL+       P P S                   P    P                G  G GG           PGEGL+ESMDVFSLGCVIAE+FL G+
Sbjct:    1 MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVKQLANGKFIKSYQCRVDGIMVVVKAYIKRDKREVLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHRNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGIRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFYSVPQASDASTTGDGATSGGTXXXXXXXGTPQQAEGVVAGAAQ--------------TKAGXXXXXGLDGLVSVGEPYPWSRC-----------------PMALAP----------------GAPGGGG----------APGEGLLESMDVFSLGCVIAEVFLAGE 326          
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Match: A0A7S2ST98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST98_9STRA)

HSP 1 Score: 246 bits (628), Expect = 6.060e-73
Identity = 175/437 (40.05%), Postives = 224/437 (51.26%), Query Frame = 1
Query:  202 MGNASSHTYAGAAPPPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRVD-GVMVVVKAYIKRDPQED--LAPVEECLMKMAKDLDTRSCPNVLPYQRWLQSNVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANYYFSSGEQG--RCYLAPERFRSAPETAEAPTSGGGVGAPAAAATDTAASKAKGCLDGGRTGVXXXXXXXXXXXXXXXXXXXLEGLEASEIRPSPSPGSSXXXXTPASGPSTPRTGTDPQTTPPRKQQHQSRQGGGRDDAGRAGRGGPAAVTERQALTPGEGLVESMDVFSLGCVIAEIFLGGDPLLDLPGLLRYRIS--GDMNTRLKKLEAAGGPVVLRLVEHMVQRDAKQRKTV 1491
            MGN++ H   G++    +D R  LQ+DLPK I  K++  GKF+K++ C+V+ GV +VVK Y+K D + D  L   +E + ++   L+    PNVLPYQ  +    R+ +  GAG   YLLRQH   +L DRLSTRPFL+  EK+W+VY L +A  QCH  GVCHGDIKSENV+VTS  W++LTDFA FKPT+LP+D P D N+YF+S E G  RCYLAPERF S+  +AEA T G   G   AAAT    SKA   L                                                        PR+ T                               AA  +   L P      SMDVFSLGCVIAE+FLG   +LDLP LL+YR +  G+    L K+     P V  LV +M+QR+   RKTV
Sbjct:    1 MGNSAPHVKPGSSGA-VSDPRNYLQYDLPKFIIQKKMGAGKFMKAFLCKVEEGVPMVVKVYVKHDGETDEALLRAKEGVEEIQTRLNPYDHPNVLPYQSSVVGAQRSGRFTGAG---YLLRQHFYTSLYDRLSTRPFLSTVEKKWIVYQLFKALIQCHDSGVCHGDIKSENVMVTSWTWIILTDFASFKPTYLPEDDPTDFNHYFASAEHGQHRCYLAPERFYSS--SAEAETQGMLGGLDPAAATAADQSKAPAGL--------------------------------------------------------PRSAT-------------------------------AARRKEGPLQP------SMDVFSLGCVIAEVFLGS-AVLDLPLLLQYRSAAEGEQEATLAKVNKIEVPSVKNLVLNMLQREPSSRKTV 337          
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Match: A0A7S3R9T1_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R9T1_DUNTE)

HSP 1 Score: 212 bits (539), Expect = 2.330e-59
Identity = 146/397 (36.78%), Postives = 201/397 (50.63%), Query Frame = 1
Query:  280 DLPKVIYVKRLANGKFIKSYQCRVD-GVMVVVKAYIKRDPQEDLAPVEECLMKMAKDLDTRSCPNVLPYQRWLQSNVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFRSAPETAEAPTSGGGVGAPAAAATDTAASKAKGCLDGGRTGVXXXXXXXXXXXXXXXXXXXLEGLEASEIRPSPSPGSSXXXXTPASGPSTPRTGTDPQTTPPRKQQHQSRQGGGRDDAGRAGRGGPAAVTE-RQALTPGEGLVESMDVFSLGCVIAEIFLGGDPLLDLPGLLRYRISGDMNTRLKKLEAAGGPVVLRLVEHMVQ 1464
            DLP V+    L  G+F+K+  C  D G +VVVKAY KR     L P ++ L ++   L    CP+V P+Q W+ +           +  YL+RQHL   L+DRLSTRPFLT  +KRW+ + LL A AQ H  G CHGDIK+ENVL+TS +W+ L+D+APFKPTFLP D+PA+ ++YF +G + RCY+APERF S   TA + TS       A AAT    +K                                       +  + S GS+    +PA  P     G+ P                GR D G   RG    V    + L P   L  +MD+FSLGC IAE+FL G  ++DL  LL Y   G+ +  ++   +   P + ++V+HM+Q
Sbjct:   18 DLPNVVLKDTLGRGRFLKTLLCLHDEGGLVVVKAYYKRADSPSLGPYKQQLARLRASLHGLPCPHVWPWQAWVDT----------ASAGYLMRQHLASGLNDRLSTRPFLTHAQKRWIAFQLLHAVAQSHEAGCCHGDIKTENVLLTSWSWVFLSDYAPFKPTFLPADNPAEFSFYFDTGGRRRCYIAPERFFS---TAASNTSNSAASPLATAATAPTPTK--------------------------------------HVPATNSVGSTPSKMSPAGAPLPNSGGSGPVP--------------GRPDPGVFVRGMSMEVGGGSRPLGP---LTPAMDIFSLGCTIAELFLDGRTVMDLGQLLGYS-RGEWDPAVQGPLSLLDPDLRQMVQHMIQ 345          
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Match: H3GYM4_PHYRM (Non-specific serine/threonine protein kinase n=16 Tax=Phytophthora TaxID=4783 RepID=H3GYM4_PHYRM)

HSP 1 Score: 216 bits (549), Expect = 3.810e-57
Identity = 150/435 (34.48%), Postives = 211/435 (48.51%), Query Frame = 1
Query:  202 MGNASSHTYAGAAPPPAADARVILQHDLPK---VIYVKRLANGKFIKSYQCRVDGVMVVVKAYIKRDPQEDLAPVEECLMKMAKDLDTRSCPNVLPYQRWLQSNVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANYYFSSGEQGR--CYLAPERFRSAPETAEAPTSGG---GVGAPAAAATDTAASKAKGCLDGGRTGVXXXXXXXXXXXXXXXXXXXLEGLEASEIRPSPSPGSSXXXXTPASGPSTPRTGTDPQTTPPRKQQHQSRQGGGRDDAGRAGRGGPAAVTERQALTPGEGLVESMDVFSLGCVIAEIFLGGDPLLDLPGLLRYRISGDMNTRLKKLEAAGGPVVLRLVEHMVQRDAKQR 1482
            MGNA+      +A   A+  R  L    P+   +++   + +GKF+KS  C+ D   +VVK Y K D +E L   E  L ++A        PNV+PY  +  SN            A+++RQ+    L DR+ +RPFLT  EK+W+ + +LRA  Q H +G+CHGDIK ENV+VTS NW+ LTDFAPFKPT++P+D PAD NYYF + +  R  C +APERF      + +  +GG    VG  +    D A   +K                             +E ++   +      G+               +G  P  TPP                  A   G A  +  ++   G  L+ESMD+FS GCVIAE+FLGG PL DLP LL+YR +GD  T  ++L   G P +  L+ HM+Q D   R
Sbjct:    1 MGNAAPRAQPQSALDSASQYRTFLMDYTPRSMDMMFGSLIGDGKFLKSISCKCDEGHLVVKIYRKYDERESLTSAEVALRRLALAFSVEQQPNVIPYADFQLSNKY--------NVAFMVRQYFASNLYDRICSRPFLTTVEKKWIAFQILRALEQSHAKGICHGDIKQENVMVTSWNWVFLTDFAPFKPTYIPEDDPADYNYYFCAIDATRRGCSVAPERFYGKSSVSISSAAGGTPGSVGLHSMKTPDAAIMLSK----------------------MADSEVTVEEVDKQILAMGMGSGT--------------MSGGIPMHTPPS-----------------ATSNGSAPSSYSRSRREGS-LLESMDIFSAGCVIAELFLGGKPLFDLPSLLKYR-TGDSETLRQQLRKVGDPRLEELLLHMLQLDPNAR 372          
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Match: A0A482RBG5_9ARCH (Protein kinase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RBG5_9ARCH)

HSP 1 Score: 198 bits (504), Expect = 1.920e-56
Identity = 106/233 (45.49%), Postives = 135/233 (57.94%), Query Frame = 1
Query:  253 ADARVILQHDLPKVIYVKRLANGKFIKSYQCRVD----------------------------GVMVVVKAYIKR-----DPQEDLAPVEECLMKMAKDLDTRSCPNVLPYQRWLQSNVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERF 852
            AD   +LQ++   ++  ++L  GKF+KSY C+ D                              + V K YIKR     D Q  +    E L ++ +    +  PN+LPYQRW       S   GA   AYL RQHL  +L +R  TRPFLT +EK WL+Y LLRA AQCH RG+ HGDIKSENV+VT+  WL+LTDFA FKPTF+PDDHPAD +Y+F SG + RCY+APERF
Sbjct:   13 ADGHFLLQNEWSAIVTKRQLGKGKFLKSYACQRDPRGHGKVGAGAAGSATAAEDDAAAARSSDSLFVCKVYIKREERGNDTQRRIGVAREQLGQLGRAFTLQRQPNLLPYQRW-----EGSPKMGA---AYLFRQHLAHSLYERCHTRPFLTRSEKMWLIYQLLRALAQCHARGIAHGDIKSENVMVTAWGWLMLTDFALFKPTFIPDDHPADFHYFFESGTRRRCYIAPERF 237          
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Match: A0A2D4CEE2_PYTIN (Phosphoinositide 3-kinase regulatory subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEE2_PYTIN)

HSP 1 Score: 212 bits (540), Expect = 4.770e-56
Identity = 151/435 (34.71%), Postives = 215/435 (49.43%), Query Frame = 1
Query:  202 MGNASSHTYAGAAPPPAADARVILQHDLPK---VIYVKRLANGKFIKSYQCRVDGVMVVVKAYIKRDPQEDLAPVEECLMKMAKDLDTRSCPNVLPYQRWLQSNVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANYYFSSGEQGR--CYLAPERFRSAPETAEAPTSGGGVGAPAAAATDTAASKAKGCLDGGRTGVXXXXXXXXXXXXXXXXXXXLEGLEASEIRPSPSPGSSXXXXTPASGPSTPRTGTDPQTTPPRKQQHQSRQGGGRDDAGRAGRGGPAAVTERQALTPGEGLVESMDVFSLGCVIAEIFLGGDPLLDLPGLLRYRISGD---MNTRLKKLEAAGGPVVLRLVEHMVQRDAKQR 1482
            MGNA+      +    A+  R  L    P+   +++V  + +GKF+KS  C+ D   ++VK Y K DP E L+  E  L +++    T + PN+LPY  +        Q       A+++RQ+    L DR+ +RPFLT  EK+W+ + +LRA  QCH +G+CHGDIK EN++VTS NW+ LTDFAPFKPT++P+D PAD NYYF + +  R  C +APERF    +     ++  GV + A A T+     A                              L  L  SEI               A G +T  + +   ++ PR     SR+ G                           L+ESMD+FS GCVIAEIFLGG PL DLP LL+YR +GD   + T L+K++    P +  L+ HM+Q D + R
Sbjct:    1 MGNAAPRAQPPSQVDSASQCRTFLMDYSPRSMNIMFVSLIGDGKFLKSIYCKCDEGSLIVKIYRKFDPNESLSSAEVALRRLSLAFTTENQPNLLPYADY--------QLSAKFNVAFMVRQYFASNLYDRICSRPFLTAIEKKWIAFQILRALEQCHSKGICHGDIKQENIMVTSWNWIFLTDFAPFKPTYIPEDDPADYNYYFCAIDATRRGCSVAPERFYG--KATSTASTNSGVSSSAGAGTNAKGPDA----------------------------IMLSRLADSEITVE-----DVEKQMMAIGNATSASASSYPSSVPR-----SRREGN--------------------------LLESMDIFSAGCVIAEIFLGGKPLFDLPLLLKYR-TGDHEHLRTALRKID---DPQLEELLLHMLQLDPRAR 357          
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Match: A0A0W8DI87_PHYNI (Non-specific serine/threonine protein kinase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DI87_PHYNI)

HSP 1 Score: 211 bits (536), Expect = 1.220e-55
Identity = 150/435 (34.48%), Postives = 212/435 (48.74%), Query Frame = 1
Query:  202 MGNASSHTYAGAAPPPAADARVILQHDLPK---VIYVKRLANGKFIKSYQCRVDGVMVVVKAYIKRDPQEDLAPVEECLMKMAKDLDTRSCPNVLPYQRWLQSNVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANYYFSSGEQGR--CYLAPERFRSAPETAEAPTSGG--GVGAPAAAATDTAASKAKGCLDGGRTGVXXXXXXXXXXXXXXXXXXXLEGLEASEIRPSPSPGSSXXXXTPASGPSTPRTGTDPQTTPPRKQQHQSRQGGGRDDAGRAGRGGPAAVTERQALTPGEG-LVESMDVFSLGCVIAEIFLGGDPLLDLPGLLRYRISGDMNTRLKKLEAAGGPVVLRLVEHMVQRDAKQR 1482
            MGNA+      +    A+  R  L    P+   +++   + +GKF+KS  C+ D   +VVK Y K D +E L   E  L ++A        PNV+PY  +  SN            A+++RQ+    L DR+ +RPFLT  EK+W+ + +LRA  Q H +G+CHGDIK ENV+VTS NW+ LTDFAPFKPT++P+D PAD NYYF + +  R  C +APERF      + +  +G   G G   +  T  AA       D   T                     +E ++   +               A G  +  T  +P  TPP    + S                P++ +  +     EG L+ESMD+FS GCVIAE+FLGG PL DLP LL+YR +GD      +L+  G P +  L+ HM+Q D   R
Sbjct:    1 MGNAAPRAQPQSVLDSASQYRTFLMDYTPRSMDMMFGSLIGDGKFLKSISCKCDEGHLVVKIYRKYDERESLTSAEVALRRLALAFSVEQQPNVIPYADFQLSNKY--------NVAFMVRQYFASNLYDRICSRPFLTMVEKKWIAFQILRALEQSHAKGICHGDIKQENVMVTSWNWVFLTDFAPFKPTYIPEDDPADYNYYFCAIDATRRGCSVAPERFYGKGSVSMSGATGSTPGTGGINSMKTPDAAMMLSRMADSEVT---------------------VEEVDKQIL---------------AMGMGSATTTGNPMQTPPLTASNSS---------------APSSYSRSRR----EGSLLESMDIFSAGCVIAELFLGGKPLFDLPSLLKYR-TGDSEALRYQLKKVGDPRLEELLLHMLQLDPTAR 371          
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Match: A0A225X0L1_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X0L1_9STRA)

HSP 1 Score: 208 bits (530), Expect = 5.260e-55
Identity = 146/432 (33.80%), Postives = 203/432 (46.99%), Query Frame = 1
Query:  202 MGNASSHTYAGAAPPPAADARVILQHDLPK---VIYVKRLANGKFIKSYQCRVDGVMVVVKAYIKRDPQEDLAPVEECLMKMAKDLDTRSCPNVLPYQRWLQSNVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANYYFSSGEQGR--CYLAPERFRSAPETAEAPTSGGGVGAPAAAATDTAASKAKGCLDGGRTGVXXXXXXXXXXXXXXXXXXXLEGLEASEIRPSPSPGSSXXXXTPASGPSTPRTGTDPQTTPPRKQQHQSRQGGGRDDAGRAGRGGPAAVTERQALTPGEGLVESMDVFSLGCVIAEIFLGGDPLLDLPGLLRYRISGDMNTRLKKLEAAGGPVVLRLVEHMVQRDAKQR 1482
            MGNA+      +    A+  R  L    P+   +++   + +GKF+KS  C+ D   +VVK Y K D +E L   E  L ++A        PNV+PY  +  SN            A+++RQ+    L DR+ +RPFLT  EK+W+ + +LRA  Q H +G+CHGDIK ENV+VTS NW+ LTDFAPFKPT++P+D PAD NYYF + +  R  C +APERF       + P S  G               A G   G                        +E ++   +               A G  +     +P  TP                   A   G A  +  ++   G  L ESMD+FS GCVIAE+FLGG PL DLP LL+YR +GD     ++L+  G P +  L+ HM+Q D   R
Sbjct:    1 MGNAAPRAQPQSVLDSASQYRTFLMDYTPRSMDMMFGSLIGDGKFLKSISCKCDEGHLVVKIYRKYDDRESLTSAEVALRRLALAFSVEQQPNVIPYADFQLSNKY--------NVAFMVRQYFASNLYDRICSRPFLTMVEKKWIAFQILRALEQSHAKGICHGDIKQENVMVTSWNWVFLTDFAPFKPTYIPEDDPADYNYYFCAIDATRRGCSVAPERFYG-----KGPVSSAG---------------ASGSTPGSAVNSMKTPDAALMLSRMADSEVTVEEVDKQIL---------------AMGMGSGTMSGNPMQTPTS-----------------ATSNGSAPSSYSRSRREGS-LQESMDIFSAGCVIAELFLGGKPLFDLPSLLKYR-TGDSEALRQQLKKVGDPRLEELLLHMLQLDPNAR 370          
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Match: A0A0P1AGI3_PLAHL (Non-specific serine/threonine protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGI3_PLAHL)

HSP 1 Score: 209 bits (532), Expect = 6.540e-55
Identity = 145/437 (33.18%), Postives = 210/437 (48.05%), Query Frame = 1
Query:  202 MGNASSHTYAGAAPPPAADARVILQHDLPK---VIYVKRLANGKFIKSYQCRVDGVMVVVKAYIKRDPQEDLAPVEECLMKMAKDLDTRSCPNVLPYQRWLQSNVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANYYFSSGEQGR--CYLAPERFRSAPETAEAPTSG---GGVGAPAAAATDTAASKAKGCLDGGRTGVXXXXXXXXXXXXXXXXXXXLEGLEASEIRPSPSPGSSXXXXTPASGPSTPRTGTDPQTTPPRKQQHQSRQGGGRDDAGRAGRGGPAAVTERQALTPGEGLVESMDVFSLGCVIAEIFLGGDPLLDLPGLLRYRISGDMNTRLKKLEAAGGPVVLRLVEHMVQRDAKQRKT 1488
            MGNA+      +    A+  R  L    P+   +++   + +GKF+KS  C+ D   +VVK Y K D +E L   E  L ++A        PNV+PY  +  SN            A+++RQ+    L DR+ +RPFLT  EK+W+ + +LRA  Q H +G+CHGD+K ENV+VTS NW+ LTDFAPFKPT++P+D PAD NYYF + +  R  C +APERF      +   +SG   G  G  A  A D A   +K                             +E ++   +      G+                G   QT+P                       G A  +  ++   G  L+ESMD+FS GCVIAE+FLGG PL DLP LL+YR +GD+ T  ++++  G   +  ++ HM+Q D   R +
Sbjct:    1 MGNAAPRAQPQSVLDSASQYRTFLMDYTPRSMDMMFGSLIGDGKFLKSISCKCDEGHLVVKIYRKYDERESLTSAEVALRRLALAFSVEQQPNVIPYADFQLSNKY--------NVAFMVRQYFASNLYDRICSRPFLTMVEKKWIAFQILRALEQSHAKGICHGDVKQENVMVTSWNWVFLTDFAPFKPTYIPEDDPADYNYYFCAIDATRRGCSVAPERFYGKGYASSGGSSGSTSGPGGYNAIKAPDAAIMLSK----------------------MADSDVSVEEVDKQILAMGMGSGN--------------MAGVSMQTSPSTTSN------------------GNAPSSYSRSRREGS-LLESMDIFSAGCVIAELFLGGKPLFDLPSLLKYRRTGDIETLKQQIKKVGDCDLEEMLLHMLQLDPSARNS 374          
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Match: A0A7S3HPT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPT4_9STRA)

HSP 1 Score: 209 bits (531), Expect = 7.480e-55
Identity = 100/200 (50.00%), Postives = 129/200 (64.50%), Query Frame = 1
Query:  256 DARVILQHDLPKVIYVKRLANGKFIKSYQCRVDGVMVVVKAYIKRDPQEDLAPVEECLMKMAKDLDTRSCPNVLPYQRWLQSNVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFR 855
            D R+  Q+DLPK I   ++ NGKF+K+Y  RVD   VVVK Y+K + ++ L P    L  M K L     PN+LPYQ W++S  R +  + A TP YL+RQ+    L DRLSTRPFL + EK W+VY L +    CH  G+ HGDIK ENV+ T+ NW++LTDF+PFKP  +PDD P D  YYF    + RCYLAPERF+
Sbjct:   30 DLRIYFQNDLPKFILQAKVGNGKFMKTYVMRVDSAPVVVKVYMKLNDEDLLVPAAH-LTIMWKTLSPAKYPNLLPYQMWIKSTARFN--KTAATPIYLIRQYFSSNLYDRLSTRPFLNELEKLWIVYQLFKCLEICHEHGIVHGDIKPENVMCTTSNWVILTDFSPFKPAIIPDDDPTDFQYYFDCMGRHRCYLAPERFQ 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10333.274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1C0_9PHAE5.700e-14763.97Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S2ST98_9STRA6.060e-7340.05Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3R9T1_DUNTE2.330e-5936.78Hypothetical protein (Fragment) n=1 Tax=Dunaliella... [more]
H3GYM4_PHYRM3.810e-5734.48Non-specific serine/threonine protein kinase n=16 ... [more]
A0A482RBG5_9ARCH1.920e-5645.49Protein kinase domain-containing protein (Fragment... [more]
A0A2D4CEE2_PYTIN4.770e-5634.71Phosphoinositide 3-kinase regulatory subunit n=1 T... [more]
A0A0W8DI87_PHYNI1.220e-5534.48Non-specific serine/threonine protein kinase n=1 T... [more]
A0A225X0L1_9STRA5.260e-5533.80Non-specific serine/threonine protein kinase n=1 T... [more]
A0A0P1AGI3_PLAHL6.540e-5533.18Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7S3HPT4_9STRA7.480e-5550.00Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10333contigH-elongata_contig10333:147..8159 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score222.6
Seed ortholog evalue3.5e-55
Seed eggNOG ortholog164328.Phyra82813
KEGG koko:K08333
KEGG Pathwayko04136,ko04138,ko04140,ko04371,map04136,map04138,map04140,map04371
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0005768,GO:0005770,GO:0005942,GO:0006464,GO:0006468,GO:0006605,GO:0006623,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006914,GO:0007034,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016236,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0019898,GO:0030242,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0032507,GO:0032991,GO:0033036,GO:0033365,GO:0034067,GO:0034271,GO:0034272,GO:0034613,GO:0035032,GO:0036211,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044232,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045053,GO:0045184,GO:0045185,GO:0045324,GO:0046907,GO:0051179,GO:0051234,GO:0051235,GO:0051641,GO:0051649,GO:0051651,GO:0061695,GO:0061919,GO:0065007,GO:0065008,GO:0070727,GO:0071561,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072665,GO:0072666,GO:0097708,GO:0098796,GO:0140096,GO:1901564,GO:1902494,GO:1990234
EggNOG free text desc.WD domain, G-beta repeat
EggNOG OGs3QCEB@4776,KOG1240@1,KOG1240@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-08_002020.1
Exons6
Model size1494
Cds size1293
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929568.2920048-CDS-H-elongata_contig10333:146..3171622929568.2920048-CDS-H-elongata_contig10333:146..317Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 147..317 -
1691679073.9789205-CDS-H-elongata_contig10333:146..3171691679073.9789205-CDS-H-elongata_contig10333:146..317Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 147..317 -
1622929568.3100264-CDS-H-elongata_contig10333:839..11151622929568.3100264-CDS-H-elongata_contig10333:839..1115Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 840..1115 -
1691679073.9917724-CDS-H-elongata_contig10333:839..11151691679073.9917724-CDS-H-elongata_contig10333:839..1115Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 840..1115 -
1622929568.3271081-CDS-H-elongata_contig10333:1576..18491622929568.3271081-CDS-H-elongata_contig10333:1576..1849Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 1577..1849 -
1691679074.0012817-CDS-H-elongata_contig10333:1576..18491691679074.0012817-CDS-H-elongata_contig10333:1576..1849Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 1577..1849 -
1622929568.3454351-CDS-H-elongata_contig10333:2321..25911622929568.3454351-CDS-H-elongata_contig10333:2321..2591Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 2322..2591 -
1691679074.008415-CDS-H-elongata_contig10333:2321..25911691679074.008415-CDS-H-elongata_contig10333:2321..2591Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 2322..2591 -
1622929568.357308-CDS-H-elongata_contig10333:3865..40281622929568.357308-CDS-H-elongata_contig10333:3865..4028Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 3866..4028 -
1691679074.0154474-CDS-H-elongata_contig10333:3865..40281691679074.0154474-CDS-H-elongata_contig10333:3865..4028Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 3866..4028 -
1622929568.3725553-CDS-H-elongata_contig10333:7818..79581622929568.3725553-CDS-H-elongata_contig10333:7818..7958Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 7819..7958 -
1691679074.022886-CDS-H-elongata_contig10333:7818..79581691679074.022886-CDS-H-elongata_contig10333:7818..7958Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10333 7819..7958 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929568.3869405-UTR-H-elongata_contig10333:7958..81591622929568.3869405-UTR-H-elongata_contig10333:7958..8159Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10333 7959..8159 -
1691679074.0303936-UTR-H-elongata_contig10333:7958..81591691679074.0303936-UTR-H-elongata_contig10333:7958..8159Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10333 7959..8159 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10333.274.1prot_H-elongata_contig10333.274.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10333 147..7958 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10333.274.1

>prot_H-elongata_contig10333.274.1 ID=prot_H-elongata_contig10333.274.1|Name=mRNA_H-elongata_contig10333.274.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=431bp
MGNASSHTYAGAAPPPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRV
DGVMVVVKAYIKRDPQEDLAPVEECLMKMAKDLDTRSCPNVLPYQRWLQS
NVRASQHRGAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRA
AAQCHGRGVCHGDIKSENVLVTSGNWLLLTDFAPFKPTFLPDDHPADANY
YFSSGEQGRCYLAPERFRSAPETAEAPTSGGGVGAPAAAATDTAASKAKG
CLDGGRTGVESGVISGAGSGQGAGRGGGLEGLEASEIRPSPSPGSSSSSS
TPASGPSTPRTGTDPQTTPPRKQQHQSRQGGGRDDAGRAGRGGPAAVTER
QALTPGEGLVESMDVFSLGCVIAEIFLGGDPLLDLPGLLRYRISGDMNTR
LKKLEAAGGPVVLRLVEHMVQRDAKQRKTVQ
back to top

mRNA from alignment at H-elongata_contig10333:147..8159-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10333.274.1 ID=mRNA_H-elongata_contig10333.274.1|Name=mRNA_H-elongata_contig10333.274.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8013bp|location=Sequence derived from alignment at H-elongata_contig10333:147..8159- (Himanthalia elongata Himel1 dioecious)
GAGAGCGGTATTTTCACCGAGTTGAAACAGCAAAGAACAGAGAGCAGAAG GCAAGGTCCGAGTACTGTCGATGCCTTTATACGCGTTGAACTGAAAGGAA ATTGTGTAGGAATTGCGTTCGAACGACTTGGGCCCATTTGCGAATTACGT TCCATCTCCGTGGACTGACTTGTTCTAATACTGCAAGGCAAAGCTAGCGG GATGGGTAATGCCTCGTCGCACACCTACGCTGGTGCAGCGCCGCCTCCCG CCGCCGATGCTCGAGTTATTCTACAACACGATCTCCCCAAAGTCATCTAC GTGAAGCGACTCGCCAACGGGAAGTTTATTAAGAGCTACCAGTGAGTATT TAGGGGGACAAGGGAAGGTTGATTTAGCGACCTTCCACCACACCTACTGT ATCAGGTAGTCTACGGCAGTTGTTGAACTGTATAATGTAGTATGAAAATT AGTTTAATATTGTCTTTGGACTAAAGAAGTACAGTACAAATACAAACGTA AGCATAGACTCTAATATTAATATTAGTATTAGCAAGGTCCACATTCGAAC CTGACGATAGTTGGTCCCCTGGATTGCACCTCTCATGGTGCTAAGAAGGC GTGGATATTCGGAGGGTTCTAATAAGTTCAAGGTTTTTTAATAATAATAT CAATACTATTAGTAGTAGTGTCGTGATCACATGTACCTGTAAGGATCAAC CGGATATGATTGCCTCCTGCTTGTAGTCAGCTAAACAGAGATTCAACGTC TTCAGATATAGCTTCCCATAATGGGGGGTATTTGCAAACCGGCGTGGTGC TCCCTTACGTGTCATGCCGGTTTGCGCAGTCAAAGGCAAATTAATAAAAA GGGGAAAATAATTTTCCCTGTCCCCGTTCGCGCATGAGAATTTGGTCTCG CGAGACAGGTTCGGCCGATCGATCCCGCGGCAGCCTGCTCATTCTTTCTA CCCAGGCTGAACATGGTACATGTAGGCTTCTCTTTTCCCACACCCACTAC TGGTAGAGTGGATATGTGCGATACAGTCAGACTGTATCGGAGACGTTCGT CACGTTCGAATGTGTATACTACTGCCTTTGAGCACAAAATCGTCGCATAT GTGATTAATCATGTTCCCGAATACAAAACCCATCGGTTTAAATAAAAATA ATGTCGGGTAGAAGTCTGCCATTATCATATACGCTTACATTATTCATAAT GTGGGGACTCCAAACCAGAGCTAGAGTATAGTATAGTAAAGTGTAGTATA GAGAATGTGCTATTAATAGAAAAAGGAAGGGTTTTTTAAATAAGGTTATT TTTCTGTATTGTGTAGGCATAAGCCAATGAAGTATATTGGATACAGTATT GGTAAGTCCAGGTAGAGATGATTAGGTAGATCTTATAATTAGGGCTAGAA ATAGTAAGATGTTTAAGCGGTAGTTCTATGCTGCTAAAAAGACATTATAC TAAATCACAACGAGGAGTTTTAAAGTAATTAGGCTTAGGCACAAGAGTAG AGGTAAGCTAACTACTGTATTCATTCATTGTTCGGATAAATAATCACATA TAATTTTTTGCCTAAGCCTAACAACCTTTAAAACCCTTTCTAGTTGAATA TTATCTAGCACATAACACTATTTCGTAAATATCTTCTTATCCTAGTTCAT AATATCCCACAGTTCTATTTATCGCTCCCGCACCCCCTCCACTCTCTAGG CTCTGGTATGGCGTTCCCACATGATGAATAATGTCAGTTTAAGGGATAAT AATGATGGGATAGATCCCCGACGTTATACCGTCGACTCGAAGAAATTATG TTTGGGGAACACGATTAATCACATGTGACGATTTTGTTCTAAAAAAGGTA GTAATGTACACATTCGAACCTCACGATAGTTGGTCCCCTGGACTGCGTCT CTCACGGTGCTAAGAAGGCGTGGATGTTCGGAGGGTTGAAATGAGTTCAT GTTTTTTTATAAGGAAAGGGGTCTAATTTTGAGCTATACAGTTCAGGTTT GCGCATAGTTGCTCCATGACGTCATCATATATAAGCAGAGTAAAAATCAA CCGGATTTGATTACTTCCTTCTTGTGGACAGCTGAAAAAGAAAAATAATT TTCCCTGCCCCCATTCGCGCCTGATAATTTTTTCTCGCGAGACGAGTTCG ACCGTCCCGTCCCGCGCCAGCCTGCTAATTCTCTCAACCCAGGCTGAATC TGGTGCGTATTCCCGGGATCCTCTTGGTTTTCTCGTTTTCCCCGACGACG TCCATCTCTACCGTCAAACCACCATCGATCCAATCCCGATTTCATCAGAT CACGTCACTGCGTACCCATGGCGTTTACCACCGAGAGTCCACCGGCACTG AGCCAGCAATTCTCAAGGTAGCTTGAGTAACCCCATGAACCAAATATTGT GTGCATCTCTTTTCCCATATAATATCTCGATTAGTTTTGTATTGTAGCTG TTCGAAAAATGTAAATTCATTTCTAGAAGGATATTATCTAAACTAGAAGA GGGTTCACGAAAGCAATTTTTTTCCTATTATTGTCAGCGGAAGGAAAGAA AGGAAACAAATATCTAAATACATATGTCCATCGAGATCGTTCGATCGTTC GACGGTCATAGACCTCAACCAACCAGTATGTCGCCCGAGATTTAAGTTCA ATTAGTCTCCTATATAATACAGTAGTGTTCGTTGTCCACTACCAGGTATA TACAGTACTATTCTAGTATCCACCATCCACGTAAGCTTCTAATACTTACG ACAGTAATATAGGATTGTTTTTTCTGAGTAAGCAGAGTTCAATTCAGTAA TTGGTTGACGAGGTCTAGGCTATAGTGTATAGTGTATAGTAGGAGTGGTG TTGAACTTGCGTGGGTAGCAATGGAAAGTGTTGGGAGAGATGGGTAGATA ATACTATTAATACTATGAATACTGCTGTACCCCTTAGGATCATAATACAG TAGGTGGGAGGGATGAAAGCGTTGCAGTAGGTGGGGTTGTTACCCTATTA ACCCTTTTGGAACTCGATTTCAAGTTCTATATTGAATTTAGTATGTAAAA GAACAGATCGAATTCCATAGGGGTTAACTAGCAATGGCGCGTTGGAAATT ATTATATCTCGAGCTAGAGCTAGCTCTCCCTCTAGTCTTGAGCTATATCT TACCTATGTTCGTATTGCAGTTAGTTTTGGTATACAGATCGTATCGCCAT CTTAGTAAGCTTAAGAGTGTAGTCTAAAGTCTAGCCATTGGTGCGAAATG TGGGGCACTTTCAGTGGAACCGTCAACTCTCTCAACTATTTTAGTCTCTT GTGTCCCCGTACTATGATCCACACAGGAGATAACAGCAACAAAGCTCCAC CGGAGAGCAAGGTACTTAACATATGACTAGTTGGGGGTTGCGTAGCGCCC TCTCCATTGAACTGTAATAATAACCCTCTTCCACCATTCACTGCCGCCTC ATCAGAGCGGTCGATCGATCAAACGCGGAATTTGATGGATGTAATATATA CTCTTATATATTCTGTATAGTATATATATATGTTCCCTAAGCTCCAAACC ATGCACTGCTCTAATGCCCTAGATTCCCCTTCTTCACTTCCCATTTGGAC TTGGTGTATGGTGTCACGACATGATCATCACGAATAGCGGAAGTACAGGG TATAACGGCGGGCTTCTCCCCCACGTATGTTGGTACAAAAAAAAAATATC ATTGGGAAATCCGACTAAATCGCACTCAGCGTTTTTGTTCTCACGGTTAG AGTGGGCACACTCGGTCCGAAGCCGTTGGGATTTACAAATAGATATTTTT AATATCTGCTATTAGAGCTGATGATAACGTCATGATGATGATGACGTCAT GATATTAATAGCGGGTCTGTTAAAAGGCCAGGGCCAGGCGACGCTAAATG TGCTAATTCAATTCAAATCAACAATCGGGGCGTTAAGATTATTAATAGTT CCTTTTGTTATACTGTATAGCAAAAAATTACGGCGGTATAATCTTATATT TTTGGCCATTCGAAATATCCGGCCTGTTCACATGGCGCACTCGCGATCTT ATTGCCTATGTCCTCTCTCTCTCTCTCTCCATGATATTCCACGATCTCTA TATCATCTGCCCTGTCATCGCTGGTTTGCAGATGCAGAGTCGATGGCGTC ATGGTGGTTGTAAAGGCCTACATCAAGCGGGACCCTCAGGAGGACCTGGC TCCGGTCGAAGAGTGCCTCATGAAGATGGCGAAGGATCTGGACACTCGCA GTTGTCCCAACGTGCTGCCTTACCAGAGGTGGCTTCAGTCCAACGTGAGT TTGGTCAGTCTGTGAAGGCCACGAGTAGCGCAGTAACACCAAGGAAGTGA ACATACAGGGTATAGAGCTCCATCCGATGCTGTATTATTAATATTAATAT TACTATGAATAACAAGGTGTACCACTATTACTAGAAGGGGCGGGTTGAAC TCTTACCGTGGAGTTGTAGTTCGAGCGTTCATTCTTATTGCTGGGAGAGA GCGGTCATTATCATTATCATTATACTGTACCATAATAATTTTGAGAGAGT TTGGTGCCTGTGAACTAAAGGGTCCTGGTATAGCGATTTATTTTACGATG TTTGAAAAATAGAGTACTGCTGTAGTATATTGTAAGAAGGAAATAAACAA TAGGGCACGGAATGTGCTTGGAAGTACTTGGTGTAACTAAACTAGTTACA GTATACTTGATACCAACCGTGGCCTTGTGGATGATGTAGATCATGGCATT GACGGCATCAATTGTCAAGAAAAACTGCCCAGGTGTTCTCGTGAAGAGAT TGGTCGATCAATCTTTGCGATCGAAACTCCTGCAGTACACTAAACTCCAG TGCACTAAGCTAAACTACAGGACGCTAAACTACAGCACAGACTCGAGCTC AGGCCTGTTGCACAAAACGTCACGATGATCATCTCGTGCTGTACTTGTAT TGTAATAGTGTAATATTAATAGTTGAAGCGCTCCACGGGGGTACCATGGG AAACAAACTACCTCACTTTAACTATTATATTTTGTTTAGCATTGCTCTTT ATATAATATCTGAAATAATAGATATTGCTCTTGCCCGAAGTACCCCCCTT CGGCTTCACATCTCTCATCTAGGTTTCCCGTGTAATGAAGGATAAACGGA CGGGTATTCAGTATTCAGTAATGGGTTGTACTGGTAGCAGGGAGCTATTA CTAGTGTTCTCAAACCTTGACCGGAATACAATCTGTTACGGCCGTCGAAT GGTTCGGCAAAGTAATTGAGAAACGAGGAATAATGTTCACTTTGGTTGTC TACCGTGTCTATCGCCATGTGAAAAATTTGCCGAGCTGTCAAGTTTATCG CTGTGGTTTCGCCCTTTCACATTGCGCCAAGGCCTGCATGTAAAAACGTT AACGTTAACACCCACGAATAAAATGGAGGGAAGGAGGGCGAAAGGCGAGA TGCTCGGGGTGAATGTTTGGTCGCCCCACACGATACGAGACGTTACGTTG CGCCCGAGATTATATCGTTTACGATTTCCGTTCACCACTGCCGTATGCCG TATGCATTCACGAAACAGGTTCGCGCCAGTCAGCATAGAGGCGCGGGTAC GCCGGCCTACCTCCTGCGACAACACCTGCTTGGGACTCTGAGCGACCGTC TGTCGACCCGGCCCTTCCTCACCGACACCGAGAAGCGGTGGCTCGTGTAT TTGCTGCTGAGGGCGGCGGCGCAGTGCCACGGCCGAGGCGTGTGCCACGG CGACATCAAGAGCGAGAACGTGCTCGTGACCAGCGGGAATTGGCTCCTGC TCACCGACTTCGCACCGTTTAAGCCCACGTTCTTGCCGGTGCGGAGATGT CTTTGATGACAGCTAATGCGCGGCTGTGAGGCGGTCAGGCGGGGCGGTAT TGCTTGGGGAGGGGGAGGCGTTTTTGAAAGGGTCCTGCATCCACCTAACC CTCTTGCCGGGGAATAAGGCTTGATATGATTGTAGTGGGTCGGTTGTCGC GAGGGACAGTTTCGTGAAGAATTTGTTTTTTCTCTTATTTCGGGGTGTAA AAGCCCGCTGGAAAATGTAAAGCATTACTACGCTTGAGGTACAAGTCAAA TCATTTCGTCTTTTACTTGTTGTCCCTTTTGTTATCTTGTATGTCGCGCT GTGGGTATTGTTCTGTGCTGTGATGGTATCTACTGTAATGTAGGCACGTG TAGTGTAGTGTAGCCTTATCCCCGAACAAACACCCTGCGATGCGTCGTCA TCCCTCCTTTCTTCTTCCGCGGAAACTGTTTCGTGTTCGAATGGCCCTTC CGTCGCGAAGGATGATCATCCCGCGGACGCCAACTACTACTTCAGCTCGG GAGAGCAGGGGCGCTGTTACCTCGCGCCTGAGCGCTTCCGCAGCGCGCCT GAGACGGCCGAAGCACCAACATCGGGGGGGGGCGTAGGCGCTCCTGCTGC TGCTGCCACTGACACTGCTGCGTCGAAAGCAAAGGGTTGTCTAGATGGAG GACGCACGGGGGTGGAAAGTGGTGTTATTTCGGGAGCGGGCTCGGGGCAA GGTGCAGGGCGAGGGGGAGGCTTGGAGGGCTTGGTGAGCTACCGTATATG GCAGAGGGTCCCGCAGCATCTCACCATTTCTCCTTAGGTTGAGTATACTA TCAATAGTAGGTCTAGAGGGGTTCTTTTATTTTTGTTGGTTCTGTTCGCG GTACGGTTGAAGGATTTCCGCGAAACGTTTGCGTTTTATCGTCTCAATAG AGAATAAAAACAGGGCGCACATTGAAAACGTTGGAAACGCCTCATAAACT CCTCCTCACTCAAGCCCCTCCGATCGATGGTATTGGAACAATGCTCTGTC CTGCCGAACATGATGGTCTCACAGGTAAGGCATGCAAAGCTTGAGCACGT TGCCCTCCCCTACCCACGCTCCCTCCGTCCTGACCCGCATGCGCCCCACA CTGTCTTGTGTGTGTATTTTGGACAAAATTGGTTACCGGTTACGGATTAC GGGTCGATGTACTGCACTCTATAAAAAATGGCAATGGAGAGCAGGAAGCG AGCGAGATCCGACCGTCACCATCGCCTGGATCGTCATCGTCGTCGTCAAC CCCAGCAAGCGGCCCGAGTACCCCACGGACGGGTACAGACCCACAGACTA CGCCGCCACGCAAGCAGCAGCACCAATCGAGGCAGGGAGGCGGACGGGAC GATGCGGGCAGGGCTGGGAGGGGAGGACCAGCGGCGGTCACGGAGCGACA AGCTTTAACGCCGGGAGAAGGGCTGGTGGAGTCTATGGACGTGTTCAGCT TGGGCTGCGTGATCGCCGAGGTTTTATATTCGTTGCTTTGATTGCTGCTT GGTTGGCGTTTCTTCGTAGAGGAGAATATGGGGAGGGGGGGGCGATATGC AATTGCCAGATGTGACATCACTGCTGTCTCCCTATAGTAAATGTTCTTGA AAAATGTCGTGTCGTGTCGTGTCGTGTCGTGTCATGCCTTCCTGGAGGCA GGACGAGGGGCACGCCCAACGGAAGGGTACACAGAGGCTCAACGCGGGAG GTAGTCTCACTAGATCCTGGTGGCGATATATGTGATGTGTCACGTGGCCT CGTACATCTCCGGTGGGGCAGCGACCCAGCTTGGCTGTCACCGTGACGGT TCTTGCCAATATGCAGTACAGTACAGTTCATTACAGGAGCGCTTCGCGGC TGTGACTCGCGGCTTTGGTCATCAGGGGTGGTACCTGAGCTTCTTTTTAC TTTTTTCTCCCTTTTTGGCCCCCCCCCCCCCCCCCCACCCCCACACACCC ACCCAATCCTTTGCACCTCTGCCACACTCGCTGGAACTCGAGATTTTCCT GGGTGGCGATCCACTTTTGGACCTACCGGGGCTATTACGGTATCGAATCT CCGGAGACATGAACACGCGACTGAAGAAGCTGGAGGCGGCGGGTGGCCCC GTTGTGCTGAGGCTGGTGGAGCACATGGTGCAAAGGGATGCTAAACAAAG GAAGACTGTGCAG
back to top

Coding sequence (CDS) from alignment at H-elongata_contig10333:147..8159-

>mRNA_H-elongata_contig10333.274.1 ID=mRNA_H-elongata_contig10333.274.1|Name=mRNA_H-elongata_contig10333.274.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2586bp|location=Sequence derived from alignment at H-elongata_contig10333:147..8159- (Himanthalia elongata Himel1 dioecious)
ATGGGTAATGCCTCGTCGCACACCTACGCTGGTGCAGCGCCGCCTCCCGC
CGCCGATGCTCGAGTTATTCTACAACACGATCTCCCCAAAGTCATCTACG
TGAAGCGACTCGCCAACGGGAAGTTTATTAAGAGCTACCAATGGGTAATG
CCTCGTCGCACACCTACGCTGGTGCAGCGCCGCCTCCCGCCGCCGATGCT
CGAGTTATTCTACAACACGATCTCCCCAAAGTCATCTACGTGAAGCGACT
CGCCAACGGGAAGTTTATTAAGAGCTACCAATGCAGAGTCGATGGCGTCA
TGGTGGTTGTAAAGGCCTACATCAAGCGGGACCCTCAGGAGGACCTGGCT
CCGGTCGAAGAGTGCCTCATGAAGATGGCGAAGGATCTGGACACTCGCAG
TTGTCCCAACGTGCTGCCTTACCAGAGGTGGCTTCAGTCCAACATGCAGA
GTCGATGGCGTCATGGTGGTTGTAAAGGCCTACATCAAGCGGGACCCTCA
GGAGGACCTGGCTCCGGTCGAAGAGTGCCTCATGAAGATGGCGAAGGATC
TGGACACTCGCAGTTGTCCCAACGTGCTGCCTTACCAGAGGTGGCTTCAG
TCCAACGTTCGCGCCAGTCAGCATAGAGGCGCGGGTACGCCGGCCTACCT
CCTGCGACAACACCTGCTTGGGACTCTGAGCGACCGTCTGTCGACCCGGC
CCTTCCTCACCGACACCGAGAAGCGGTGGCTCGTGTATTTGCTGCTGAGG
GCGGCGGCGCAGTGCCACGGCCGAGGCGTGTGCCACGGCGACATCAAGAG
CGAGAACGTGCTCGTGACCAGCGGGAATTGGCTCCTGCTCACCGACTTCG
CACCGTTTAAGCCCACGTTCTTGCCGGTTCGCGCCAGTCAGCATAGAGGC
GCGGGTACGCCGGCCTACCTCCTGCGACAACACCTGCTTGGGACTCTGAG
CGACCGTCTGTCGACCCGGCCCTTCCTCACCGACACCGAGAAGCGGTGGC
TCGTGTATTTGCTGCTGAGGGCGGCGGCGCAGTGCCACGGCCGAGGCGTG
TGCCACGGCGACATCAAGAGCGAGAACGTGCTCGTGACCAGCGGGAATTG
GCTCCTGCTCACCGACTTCGCACCGTTTAAGCCCACGTTCTTGCCGGATG
ATCATCCCGCGGACGCCAACTACTACTTCAGCTCGGGAGAGCAGGGGCGC
TGTTACCTCGCGCCTGAGCGCTTCCGCAGCGCGCCTGAGACGGCCGAAGC
ACCAACATCGGGGGGGGGCGTAGGCGCTCCTGCTGCTGCTGCCACTGACA
CTGCTGCGTCGAAAGCAAAGGGTTGTCTAGATGGAGGACGCACGGGGGTG
GAAAGTGGTGTTATTTCGGGAGCGGGCTCGGGGCAAGGTGCAGGGCGAGG
GGGAGGCTTGGAGGGCTTGGATGATCATCCCGCGGACGCCAACTACTACT
TCAGCTCGGGAGAGCAGGGGCGCTGTTACCTCGCGCCTGAGCGCTTCCGC
AGCGCGCCTGAGACGGCCGAAGCACCAACATCGGGGGGGGGCGTAGGCGC
TCCTGCTGCTGCTGCCACTGACACTGCTGCGTCGAAAGCAAAGGGTTGTC
TAGATGGAGGACGCACGGGGGTGGAAAGTGGTGTTATTTCGGGAGCGGGC
TCGGGGCAAGGTGCAGGGCGAGGGGGAGGCTTGGAGGGCTTGGAAGCGAG
CGAGATCCGACCGTCACCATCGCCTGGATCGTCATCGTCGTCGTCAACCC
CAGCAAGCGGCCCGAGTACCCCACGGACGGGTACAGACCCACAGACTACG
CCGCCACGCAAGCAGCAGCACCAATCGAGGCAGGGAGGCGGACGGGACGA
TGCGGGCAGGGCTGGGAGGGGAGGACCAGCGGCGGTCACGGAGCGACAAG
CTTTAACGCCGGGAGAAGGGCTGGTGGAGTCTATGGACGTGTTCAGCTTG
GGCTGCGTGATCGCCGAGGAAGCGAGCGAGATCCGACCGTCACCATCGCC
TGGATCGTCATCGTCGTCGTCAACCCCAGCAAGCGGCCCGAGTACCCCAC
GGACGGGTACAGACCCACAGACTACGCCGCCACGCAAGCAGCAGCACCAA
TCGAGGCAGGGAGGCGGACGGGACGATGCGGGCAGGGCTGGGAGGGGAGG
ACCAGCGGCGGTCACGGAGCGACAAGCTTTAACGCCGGGAGAAGGGCTGG
TGGAGTCTATGGACGTGTTCAGCTTGGGCTGCGTGATCGCCGAGATTTTC
CTGGGTGGCGATCCACTTTTGGACCTACCGGGGCTATTACGGTATCGAAT
CTCCGGAGACATGAACACGCGACTGAAGAAGCTGGAGGCGGCGGGTGGCC
CCGTTGTGCTGAGGCTGGTGGAGCACATGGTGCAAAGGGATGCTAAACAA
AGGAAGACTGTGCAGATTTTCCTGGGTGGCGATCCACTTTTGGACCTACC
GGGGCTATTACGGTATCGAATCTCCGGAGACATGAACACGCGACTGAAGA
AGCTGGAGGCGGCGGGTGGCCCCGTTGTGCTGAGGCTGGTGGAGCACATG
GTGCAAAGGGATGCTAAACAAAGGAAGACTGTGCAG
back to top