mRNA_H-elongata_contig103307.272.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig103307.272.1
Unique NamemRNA_H-elongata_contig103307.272.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Match: D7FVZ8_ECTSI (Transaldolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVZ8_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 3.980e-129
Identity = 212/317 (66.88%), Postives = 243/317 (76.66%), Query Frame = 1
Query:    1 ETSVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNMTLLFALPQAAACAEAGATLISPFVGRILDFYKKKTGKTYTPS-EDPGCISVSEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLEELQNCTDDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGFAADIVKLEAIVCERLGMSATPATNGGVNGECATP-------------------ETEFAQPARMTTIGAAAGEIEAIRKYKPTDATTNPSLIYAATQMEEYRGFVENAVKMALAIEG 891
            E ++ + R  I      GVDKSRILIKIASTWEGI+ACE+LQKEGI+CNMTLLFALPQAAACAEAGATLISPFVGRILD++KKKTG +Y  + +DPGCISVSEIYGYYKKHGY TIVMGASFRSK EVL+LAGCDRLTIAPKFL ELQ    +VV+ L+A +SAA C LDK LP SESAFRLAMND+PMATSKLAEGIRGF+AD+VKLEA V +RLG++ +                                 +TEF Q A +TTI A +GEIEAIRKYKPTDATTNPSLIYAA QM  Y+GFV++AVK AL ++G
Sbjct:  117 EATLARARNIISLYEAAGVDKSRILIKIASTWEGIKACEVLQKEGITCNMTLLFALPQAAACAEAGATLISPFVGRILDYHKKKTGNSYPDAWQDPGCISVSEIYGYYKKHGYGTIVMGASFRSKDEVLQLAGCDRLTIAPKFLAELQESNGEVVQHLEASASAAACTLDK-LPSSESAFRLAMNDDPMATSKLAEGIRGFSADLVKLEATVRDRLGVTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKTEFDQLAEVTTIVADSGEIEAIRKYKPTDATTNPSLIYAAAQMPAYQGFVDDAVKHALGLQG 432          
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Match: W7U1X5_9STRA (Transaldolase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1X5_9STRA)

HSP 1 Score: 291 bits (745), Expect = 2.350e-90
Identity = 153/296 (51.69%), Postives = 209/296 (70.61%), Query Frame = 1
Query:    1 ETSVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNMTLLFALPQAAACAEAGATLISPFVGRILDFYKKKTGKTYTPSE-DPGCISVSEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLEELQNCTDDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGFAADIVKLEAIVCERLGMSATPATNGGVNGECATPETEFAQPARMTTIGAAAGEIEAIRKYKPTDATTNPSLIYAATQMEEYRGFVENAVKMALAI 885
            + ++ + RR I      G+ K RILIKIASTWEGI+A E L++EG+  N+TLLF+L QA A AEAGATL+SPFVGRILD++KK+TGKT+  +E DPG  SV +IYGYYKK+GY+TIVMGASFR+KGE+  LAGCDRLTI+P  L+EL++C D + R L+ ++ ++     +++   E +FRLAMN + MAT+KLAEGIRGFAADI KLEA++ + L                  P  +F+Q A  TT+    G++EAI++ KPTDATTNPSLI+ A  + +Y+  V++A+    A+
Sbjct:  116 DETLKRARRIIGMYKELGISKERILIKIASTWEGIKAAEALEQEGVKTNLTLLFSLAQAVAAAEAGATLVSPFVGRILDWWKKETGKTFADAEEDPGVQSVRQIYGYYKKYGYETIVMGASFRNKGEITALAGCDRLTISPGLLDELKDCHDPLPRVLEPENGSSFYD-GERIRVDEKSFRLAMNADAMATAKLAEGIRGFAADIEKLEAMIAKML----------------VPPSDQFSQLAVFTTLVCDTGDVEAIKRLKPTDATTNPSLIFKAASLPQYKPLVDSAIAAGKAV 394          
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Match: A0A7R9UIC3_9STRA (Transaldolase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UIC3_9STRA)

HSP 1 Score: 284 bits (726), Expect = 4.200e-89
Identity = 154/292 (52.74%), Postives = 197/292 (67.47%), Query Frame = 1
Query:    1 ETSVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNMTLLFALPQAAACAEAGATLISPFVGRILDFYKKKTGKTYTPSEDPGCISVSEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLEELQNCTDDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGFAADIVKLEAIVCERLGMSATPATNGGVNGECATPETEFAQPARMTTIGAAAGEIEAIRKYKPTDATTNPSLIYAATQMEEYRGFVENAVKMA 876
            E ++ + RR I      G+ K R+LIKIASTWEGI+AC++LQ EG+ CNMTLLF+L QAAACA+AGATLISPFVGRI D+YK K G+++  +EDPG +SV  IY YYK  GY TIVMGASFR+ G++ ELAGCDRLTI+P  L+EL   ++ V  KLD      +     KL  +E AFR AM+++PMAT+KLAEGIR F+ADI  LE +V            N  +  + A   + F Q   +TTI A  G+I++I+K KPTDATTNPSL+Y A  + EY   +E AV  A
Sbjct:  187 EGTLKRARRIIQMYEEIGISKDRVLIKIASTWEGIQACKVLQLEGVQCNMTLLFSLAQAAACADAGATLISPFVGRISDWYKAKEGRSFEAAEDPGVLSVQTIYRYYKALGYPTIVMGASFRNTGQITELAGCDRLTISPGLLDELAASSEAVPTKLDPSQPNTI----DKLENTEMAFRWAMSEDPMATAKLAEGIRKFSADIESLETVV------------NRKIVEKRAEGRSAFEQLQLLTTIVADTGDIKSIKKVKPTDATTNPSLLYKAATLPEYANLLEEAVASA 462          
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Match: A0A067DAI4_SAPPC (Transaldolase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067DAI4_SAPPC)

HSP 1 Score: 273 bits (698), Expect = 2.310e-87
Identity = 141/213 (66.20%), Postives = 162/213 (76.06%), Query Frame = 1
Query:    7 SVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNMTLLFALPQAAACAEAGATLISPFVGRILDFYKKKTGKTYTPSEDPGCISVSEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLEELQNCTDDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGFAADIVKLEAIVCERL 645
            ++ +  R I      G+ K RILIKIASTWEGI AC+ LQ+EGI CNMTLLF  PQA ACAEA ATLISPFVGRILD+YK KTGKTYT  EDPG +SV+ IY YYKKHGY TIVMGASFR+ GEVLELAGCDRLTI+P  LEEL N TD V +KLDA+++ A      K+  SE  FR AMN++ MAT KL+EGIRGF ADIVKLE I+  +L
Sbjct:  109 TIDRAHRIIGMYEAAGISKDRILIKIASTWEGIEACKFLQQEGIKCNMTLLFGFPQAVACAEADATLISPFVGRILDWYKAKTGKTYTSVEDPGVVSVTNIYNYYKKHGYSTIVMGASFRNTGEVLELAGCDRLTISPNLLEELANSTDVVTKKLDAEAAQAN-YNGAKVTFSEKEFRFAMNEDAMATEKLSEGIRGFCADIVKLEDILKAKL 320          
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Match: A0A6H5KHP6_9PHAE (Transaldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP6_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 1.800e-84
Identity = 141/239 (59.00%), Postives = 172/239 (71.97%), Query Frame = 1
Query:    1 ETSVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNMTLLFALPQAAACAEAGATLISPFVGRILDFYKKKTGKT-YTPSEDPGCISVSEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLE------------------ELQNCTDDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGFAADIVKLEAIVCERLGMSAT 660
            E +V KGR  +      G+DKSR+LIKIASTWEGIRACEILQKEGISCNMTLLF + QA ACAEAGATLISPFVGRI D+YK  TG++ Y   EDPGC+SVSEIYGYYKKHG+ TIVMGASFR+KG++L+LAGCDRLTIAPKFLE                  EL+  T+ V RKL+ ++ A+      + P    +FRL +N+N MAT KLAEGI  F+  IVK+E I+ +R+  ++T
Sbjct:  177 EATVAKGRSIVALYKAAGIDKSRVLIKIASTWEGIRACEILQKEGISCNMTLLFCMAQAVACAEAGATLISPFVGRITDWYKADTGRSGYAAEEDPGCLSVSEIYGYYKKHGHGTIVMGASFRNKGQILQLAGCDRLTIAPKFLEVGEDXXXXXXXXXXYGNGELKGGTEKVERKLEPET-ASKAYSGGRYPADSKSFRLKLNENAMATEKLAEGIASFSQAIVKVEKIITDRIAAAST 414          
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Match: A0A0P1AH91_PLAHL (Transaldolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AH91_PLAHL)

HSP 1 Score: 264 bits (675), Expect = 1.030e-83
Identity = 134/216 (62.04%), Postives = 165/216 (76.39%), Query Frame = 1
Query:    1 ETSVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNMTLLFALPQAAACAEAGATLISPFVGRILDFYKKKTGKT-YTPSEDPGCISVSEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLEELQNCTDDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGFAADIVKLEAIVCERL 645
            + ++ +  R I    + G+ K RILIKIASTWEGI+AC+ LQKEGISCNMTLLF   QA  CAEAGATLISPFVGRILD++K K GK+ Y P EDPG +SV+ IY YYKK+ YQTIVMGASFR+ GE+ ELAGCDRLTI+P  LEEL   T+ + +KLD +++A  C ++K L   E  FRL+MN++ MAT KLAEGIRGF+ADIVKLE I+  +L
Sbjct:  118 KNTIARAHRIIELYEKAGIQKDRILIKIASTWEGIQACKHLQKEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKIGKSSYEPHEDPGVVSVTSIYQYYKKYNYQTIVMGASFRNTGEITELAGCDRLTISPALLEELAESTEALTKKLDPETAAKACSIEK-LSFDEKEFRLSMNEDAMATEKLAEGIRGFSADIVKLEQILKTKL 332          
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Match: A0A024GRW7_9STRA (Transaldolase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRW7_9STRA)

HSP 1 Score: 261 bits (668), Expect = 8.090e-83
Identity = 138/214 (64.49%), Postives = 164/214 (76.64%), Query Frame = 1
Query:    7 SVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNMTLLFALPQAAACAEAGATLISPFVGRILDFYKKKTG-KTYTPSEDPGCISVSEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLEELQNCTDDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGFAADIVKLEAIVCERL 645
            ++ +  R I    + G+ K RILIKIASTWEGI+AC+ L+KEGI CNMTLLF   QAAACAEAGATLISPFVGRILD+YK KTG  +Y P EDPG +SV+ IY Y KK+GY+TIVMGASFR+  E+LELAGCDRLTI+P  LEEL      V RKLD ++SAA     +KL  SE  FRL MND+ MAT KLAEGIRGF+ADIVKLEAI+ +++
Sbjct:  110 TIERAHRIIDLYQKEGIGKERILIKIASTWEGIQACKKLEKEGIHCNMTLLFGFAQAAACAEAGATLISPFVGRILDWYKAKTGLSSYKPEEDPGVVSVTNIYRYLKKYGYKTIVMGASFRNTEEILELAGCDRLTISPSLLEELATKETPVSRKLD-ETSAAKAYEGEKLMLSEKDFRLLMNDDAMATEKLAEGIRGFSADIVKLEAILSDKM 322          
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Match: A0A484E7C0_BRELC (Transaldolase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7C0_BRELC)

HSP 1 Score: 261 bits (668), Expect = 1.180e-82
Identity = 134/212 (63.21%), Postives = 163/212 (76.89%), Query Frame = 1
Query:    1 ETSVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNMTLLFALPQAAACAEAGATLISPFVGRILDFYKKKTGKT-YTPSEDPGCISVSEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLEELQNCTDDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGFAADIVKLEAIV 633
            E ++ +  R I    + G+ K RILIKIASTWEGI+AC  LQKEGISCNMTLLF   QA +CAEAGATLISPFVGRILD++K KTGKT Y P EDPG +SV++IY YYKK+ Y+TIVMGASFR+ GE+ ELAGCDRLTI+P  LEEL   T  +V+KLD ++ A      +K+  +E  FRL+MN++ MAT KLAEGIRGF+ADIVKLE I+
Sbjct:  118 EATIARAHRIIELYEKAGIKKDRILIKIASTWEGIQACRHLQKEGISCNMTLLFGFAQAVSCAEAGATLISPFVGRILDWHKAKTGKTSYEPHEDPGVVSVTKIYQYYKKYEYETIVMGASFRNTGEITELAGCDRLTISPALLEELNTATAKLVKKLDPET-AIKAYTGEKISYAEKEFRLSMNEDAMATEKLAEGIRGFSADIVKLEQIL 328          
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Match: A0A662XW57_9STRA (Transaldolase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XW57_9STRA)

HSP 1 Score: 260 bits (665), Expect = 3.330e-82
Identity = 132/216 (61.11%), Postives = 165/216 (76.39%), Query Frame = 1
Query:    1 ETSVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNMTLLFALPQAAACAEAGATLISPFVGRILDFYKKKTGKT-YTPSEDPGCISVSEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLEELQNCTDDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGFAADIVKLEAIVCERL 645
            E ++ +  R +    + G+ K RILIKIASTWEGI+AC+ LQKEGISCNMTLLF   QA  CAEAGATLISPFVGRILD++K KTGK+ Y   EDPG +SV++IY YYKK+GY+TIVMGASFR+ GE+ EL GCDRLTI+P  LE+L   TD + +KLD + SA   +  +K+  +E  FRL+MN++ MAT KLAEGIRGF+ADIVKLE I+  +L
Sbjct:  118 EATIARAHRILELYEKAGITKDRILIKIASTWEGIQACKQLQKEGISCNMTLLFGFAQAVGCAEAGATLISPFVGRILDWHKAKTGKSSYEAHEDPGVVSVTKIYQYYKKYGYKTIVMGASFRNTGEITELTGCDRLTISPNLLEDLTKSTDKLEKKLDEEESAKAYV-GEKISYAEKDFRLSMNEDAMATEKLAEGIRGFSADIVKLEQILKTKL 332          
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Match: K3WK76_GLOUD (Transaldolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK76_GLOUD)

HSP 1 Score: 260 bits (664), Expect = 4.570e-82
Identity = 134/216 (62.04%), Postives = 164/216 (75.93%), Query Frame = 1
Query:    1 ETSVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNMTLLFALPQAAACAEAGATLISPFVGRILDFYKKKTGKT-YTPSEDPGCISVSEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLEELQNCTDDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGFAADIVKLEAIVCERL 645
            E ++ +  R I    + G+ K RIL+KIASTWEGI+AC+ LQ EGISCNMTLLF   QA  CAEA ATLISPFVGRILD++K KTGK+ Y   EDPG +SVS+IY YYKK GY+TIVMGASFR+ GE+ ELAGCDRLTI+P  L+EL   T+ + RKLD +S+AA     +KL  SE  FRL++N++ MAT KLAEGIRGF+ADIVKLE I+  +L
Sbjct:  117 EATIARAHRIIEMYKKAGISKDRILVKIASTWEGIQACKELQAEGISCNMTLLFGFAQAVGCAEANATLISPFVGRILDWHKAKTGKSSYESHEDPGVVSVSKIYQYYKKFGYKTIVMGASFRNVGEITELAGCDRLTISPNLLDELSKSTEPISRKLDEESAAAK-YTGEKLSLSEKGFRLSLNEDAMATEKLAEGIRGFSADIVKLEDILKAKL 331          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig103307.272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVZ8_ECTSI3.980e-12966.88Transaldolase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
W7U1X5_9STRA2.350e-9051.69Transaldolase n=1 Tax=Nannochloropsis gaditana Tax... [more]
A0A7R9UIC3_9STRA4.200e-8952.74Transaldolase (Fragment) n=1 Tax=Pinguiococcus pyr... [more]
A0A067DAI4_SAPPC2.310e-8766.20Transaldolase n=3 Tax=Saprolegniaceae TaxID=4764 R... [more]
A0A6H5KHP6_9PHAE1.800e-8459.00Transaldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A0P1AH91_PLAHL1.030e-8362.04Transaldolase n=1 Tax=Plasmopara halstedii TaxID=4... [more]
A0A024GRW7_9STRA8.090e-8364.49Transaldolase n=1 Tax=Albugo candida TaxID=65357 R... [more]
A0A484E7C0_BRELC1.180e-8263.21Transaldolase n=1 Tax=Bremia lactucae TaxID=4779 R... [more]
A0A662XW57_9STRA3.330e-8261.11Transaldolase n=2 Tax=Nothophytophthora sp. Chile5... [more]
K3WK76_GLOUD4.570e-8262.04Transaldolase n=1 Tax=Globisporangium ultimum (str... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig103307contigH-elongata_contig103307:83..1618 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score394.8
Seed ortholog evalue3.6e-107
Seed eggNOG ortholog2880.D7FVZ8
Preferred nameTALDO1
KEGG rclassRC00439,RC00604
KEGG koko:K00616
KEGG ReactionR01827
KEGG Pathwayko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00004,M00007
GOsGO:0001300,GO:0003674,GO:0003824,GO:0004801,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0005997,GO:0005999,GO:0006002,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007166,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009052,GO:0009058,GO:0009117,GO:0009987,GO:0010033,GO:0016051,GO:0016740,GO:0016744,GO:0019221,GO:0019321,GO:0019322,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0023052,GO:0030246,GO:0031974,GO:0031981,GO:0032502,GO:0033554,GO:0034097,GO:0034599,GO:0034641,GO:0035722,GO:0036094,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046364,GO:0046483,GO:0046496,GO:0048029,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051156,GO:0051186,GO:0051716,GO:0055086,GO:0065007,GO:0070013,GO:0070671,GO:0070887,GO:0071310,GO:0071345,GO:0071349,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901576
EggNOG free text desc.sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity
EggNOG OGsCOG0176@1,KOG2772@2759
EC2.2.1.2
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAldolase-type TIM barrel
Ec32 orthologEc-01_002780.1
Exons4
Model size918
Cds size918
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig103307.272.1prot_H-elongata_contig103307.272.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig103307 83..1618 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929568.1200402-CDS-H-elongata_contig103307:82..2561622929568.1200402-CDS-H-elongata_contig103307:82..256Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig103307 83..256 +
1691679073.9052818-CDS-H-elongata_contig103307:82..2561691679073.9052818-CDS-H-elongata_contig103307:82..256Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig103307 83..256 +
1622929568.1331682-CDS-H-elongata_contig103307:440..6981622929568.1331682-CDS-H-elongata_contig103307:440..698Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig103307 441..698 +
1691679073.917618-CDS-H-elongata_contig103307:440..6981691679073.917618-CDS-H-elongata_contig103307:440..698Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig103307 441..698 +
1622929568.1472151-CDS-H-elongata_contig103307:903..9811622929568.1472151-CDS-H-elongata_contig103307:903..981Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig103307 904..981 +
1691679073.9322186-CDS-H-elongata_contig103307:903..9811691679073.9322186-CDS-H-elongata_contig103307:903..981Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig103307 904..981 +
1622929568.1603456-CDS-H-elongata_contig103307:1210..16181622929568.1603456-CDS-H-elongata_contig103307:1210..1618Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig103307 1211..1618 +
1691679073.9395006-CDS-H-elongata_contig103307:1210..16181691679073.9395006-CDS-H-elongata_contig103307:1210..1618Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig103307 1211..1618 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig103307.272.1

>prot_H-elongata_contig103307.272.1 ID=prot_H-elongata_contig103307.272.1|Name=mRNA_H-elongata_contig103307.272.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=306bp
ETSVVKGRRWIPFRARTGVDKSRILIKIASTWEGIRACEILQKEGISCNM
TLLFALPQAAACAEAGATLISPFVGRILDFYKKKTGKTYTPSEDPGCISV
SEIYGYYKKHGYQTIVMGASFRSKGEVLELAGCDRLTIAPKFLEELQNCT
DDVVRKLDADSSAAVCILDKKLPKSESAFRLAMNDNPMATSKLAEGIRGF
AADIVKLEAIVCERLGMSATPATNGGVNGECATPETEFAQPARMTTIGAA
AGEIEAIRKYKPTDATTNPSLIYAATQMEEYRGFVENAVKMALAIEGLRW
ITKGS*
back to top

mRNA from alignment at H-elongata_contig103307:83..1618+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig103307.272.1 ID=mRNA_H-elongata_contig103307.272.1|Name=mRNA_H-elongata_contig103307.272.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1536bp|location=Sequence derived from alignment at H-elongata_contig103307:83..1618+ (Himanthalia elongata Himel1 dioecious)
GAAACATCCGTTGTTAAAGGCCGACGCTGGATACCGTTTCGCGCGCGAAC AGGCGTAGACAAGTCTCGGATCCTGATCAAGATCGCGAGCACTTGGGAGG GCATCCGGGCGTGCGAGATCCTCCAAAAGGAGGGTATTTCGTGCAACATG ACTCTCCTCTTCGCCCTGCCTCAGGTGAACGGCCGATGGTCGTGACGTAA GAAGTGTTCGATGAACGAAGAATATTTTCGCCCGTCTACTAGGCGGGAGG TGGAGAAATACGCCTCCGGTATAGTTGCAACTCCTCGTTCGTTTTCTGTT TTGTTTTTTCGAACCACTTTCAACACTGTTCGACATCTACTCTGTCTGCA AACCCCAGGCGGCGGCTTGCGCCGAGGCAGGAGCCACCCTTATCTCGCCC TTCGTTGGGCGCATCCTGGACTTCTACAAGAAAAAGACCGGAAAGACTTA TACGCCGTCGGAGGATCCGGGTTGCATCAGCGTTTCCGAAATATACGGCT ACTACAAGAAGCACGGGTACCAGACGATCGTCATGGGCGCCAGCTTCCGG AGTAAGGGAGAGGTTCTGGAGCTGGCGGGTTGCGACAGGCTCACGATCGC GCCCAAGTTCCTTGAGGTACTCGGTAGTTTCCGTCGCCGTGGGCGCTTTG GCCAACGCGCTCGACAGCAAGTAGAACGTGTTTCACCACCTTCAGCAGTC GTCACAGCAGCGAGACAAGCCTCCTTTTGGAGATCGTATATTTTCCTTGG GATTGGACAGACTTTTCAGACGTGGAGGGTAATAATATCGCCGTTTCCGT TGTGGCTCCTCGACTCAACAGGAGCTTCAAAACTGCACCGACGACGTGGT GAGGAAGCTTGACGCTGATTCGTCCGCAGCGGTGTGCATCCTCGATAAGG TATGCTTGTCCCCCCTGGCAGTTATATATATGTATATAAATCTACAGGTT TTATTTTTAAAGCGCTTCCTGCGCTTAAAGGTATAAAAGGTTTTACACGA ATTTCTGTCTTGGGTCGAAAAAAACTGCCAATGTTTTGGCACTAGACTCA ACAATGAATACACCCTCCGTGAACCCACCTCCTGCGATTGCTCCGACTCC GCCGTGTTTTTCGTACCATTCCGGCAAGAAGCTCCCCAAGAGCGAGTCGG CGTTCCGCTTGGCGATGAACGATAACCCCATGGCCACCTCCAAGCTTGCA GAGGGAATCCGCGGCTTCGCGGCGGACATCGTTAAGCTCGAGGCCATCGT CTGCGAGCGCCTAGGCATGTCTGCAACTCCCGCAACTAATGGGGGCGTGA ACGGCGAGTGCGCCACCCCCGAGACGGAGTTCGCCCAGCCGGCGCGCATG ACGACGATCGGGGCGGCCGCGGGGGAGATCGAGGCCATCCGGAAGTACAA ACCCACGGACGCAACAACCAACCCGTCGCTGATATACGCGGCCACGCAGA TGGAGGAGTACCGGGGCTTCGTGGAGAATGCGGTGAAGATGGCGCTTGCG ATCGAAGGTTTGCGATGGATTACAAAAGGCAGCTGA
back to top

Coding sequence (CDS) from alignment at H-elongata_contig103307:83..1618+

>mRNA_H-elongata_contig103307.272.1 ID=mRNA_H-elongata_contig103307.272.1|Name=mRNA_H-elongata_contig103307.272.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1836bp|location=Sequence derived from alignment at H-elongata_contig103307:83..1618+ (Himanthalia elongata Himel1 dioecious)
GAAACATCCGTTGTTAAAGGCCGACGCTGGATACCGTTTCGCGCGCGAAC
AGGCGTAGACAAGTCTCGGATCCTGATCAAGATCGCGAGCACTTGGGAGG
GCATCCGGGCGTGCGAGATCCTCCAAAAGGAGGGTATTTCGTGCAACATG
ACTCTCCTCTTCGCCCTGCCTCAGGAAACATCCGTTGTTAAAGGCCGACG
CTGGATACCGTTTCGCGCGCGAACAGGCGTAGACAAGTCTCGGATCCTGA
TCAAGATCGCGAGCACTTGGGAGGGCATCCGGGCGTGCGAGATCCTCCAA
AAGGAGGGTATTTCGTGCAACATGACTCTCCTCTTCGCCCTGCCTCAGGC
GGCGGCTTGCGCCGAGGCAGGAGCCACCCTTATCTCGCCCTTCGTTGGGC
GCATCCTGGACTTCTACAAGAAAAAGACCGGAAAGACTTATACGCCGTCG
GAGGATCCGGGTTGCATCAGCGTTTCCGAAATATACGGCTACTACAAGAA
GCACGGGTACCAGACGATCGTCATGGGCGCCAGCTTCCGGAGTAAGGGAG
AGGTTCTGGAGCTGGCGGGTTGCGACAGGCTCACGATCGCGCCCAAGTTC
CTTGAGGCGGCGGCTTGCGCCGAGGCAGGAGCCACCCTTATCTCGCCCTT
CGTTGGGCGCATCCTGGACTTCTACAAGAAAAAGACCGGAAAGACTTATA
CGCCGTCGGAGGATCCGGGTTGCATCAGCGTTTCCGAAATATACGGCTAC
TACAAGAAGCACGGGTACCAGACGATCGTCATGGGCGCCAGCTTCCGGAG
TAAGGGAGAGGTTCTGGAGCTGGCGGGTTGCGACAGGCTCACGATCGCGC
CCAAGTTCCTTGAGGAGCTTCAAAACTGCACCGACGACGTGGTGAGGAAG
CTTGACGCTGATTCGTCCGCAGCGGTGTGCATCCTCGATAAGGAGCTTCA
AAACTGCACCGACGACGTGGTGAGGAAGCTTGACGCTGATTCGTCCGCAG
CGGTGTGCATCCTCGATAAGAAGCTCCCCAAGAGCGAGTCGGCGTTCCGC
TTGGCGATGAACGATAACCCCATGGCCACCTCCAAGCTTGCAGAGGGAAT
CCGCGGCTTCGCGGCGGACATCGTTAAGCTCGAGGCCATCGTCTGCGAGC
GCCTAGGCATGTCTGCAACTCCCGCAACTAATGGGGGCGTGAACGGCGAG
TGCGCCACCCCCGAGACGGAGTTCGCCCAGCCGGCGCGCATGACGACGAT
CGGGGCGGCCGCGGGGGAGATCGAGGCCATCCGGAAGTACAAACCCACGG
ACGCAACAACCAACCCGTCGCTGATATACGCGGCCACGCAGATGGAGGAG
TACCGGGGCTTCGTGGAGAATGCGGTGAAGATGGCGCTTGCGATCGAAGG
TTTGCGATGGATTACAAAAGGCAGCTGAAAGCTCCCCAAGAGCGAGTCGG
CGTTCCGCTTGGCGATGAACGATAACCCCATGGCCACCTCCAAGCTTGCA
GAGGGAATCCGCGGCTTCGCGGCGGACATCGTTAAGCTCGAGGCCATCGT
CTGCGAGCGCCTAGGCATGTCTGCAACTCCCGCAACTAATGGGGGCGTGA
ACGGCGAGTGCGCCACCCCCGAGACGGAGTTCGCCCAGCCGGCGCGCATG
ACGACGATCGGGGCGGCCGCGGGGGAGATCGAGGCCATCCGGAAGTACAA
ACCCACGGACGCAACAACCAACCCGTCGCTGATATACGCGGCCACGCAGA
TGGAGGAGTACCGGGGCTTCGTGGAGAATGCGGTGAAGATGGCGCTTGCG
ATCGAAGGTTTGCGATGGATTACAAAAGGCAGCTGA
back to top