prot_H-elongata_contig138894.2710.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig138894.2710.1
Unique Name	prot_H-elongata_contig138894.2710.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	101

Homology

[Close]

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Match: A0A425CDZ1_9STRA (Alanine--tRNA ligase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CDZ1_9STRA)

HSP 1 Score: 179 bits (453), Expect = 6.820e-53
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    2 YLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDIPEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNFE 101
            YLP ERVLPFD KDNFWEMGDVGPCGPCTEIHYDRIG R+AA  VN D+P+VIEIWN VFIQYNRE DG L  LP+KHVDTGMGFER+ASILQ  D N++
Sbjct:  197 YLPPERVLPFDCKDNFWEMGDVGPCGPCTEIHYDRIGNRDAASLVNADVPDVIEIWNNVFIQYNREQDGKLVQLPHKHVDTGMGFERLASILQGKDSNYD 296

[Close]

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Match: D7FPP9_ECTSI (Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP9_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.070e-52
Identity = 81/101 (80.20%), Postives = 91/101 (90.10%), Query Frame = 0

Query:    1 RYLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDIPEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNFE 101
            +YLPE RVLPF   DNFWEMGDVGPCGPC EIHYDRIGGR+AAKDVNMD PEVIEIWN+VFIQYNRE+DGSLK+LPNKH+DTG+GFER+ASILQ    N++
Sbjct:  185 KYLPESRVLPFSLADNFWEMGDVGPCGPCVEIHYDRIGGRDAAKDVNMDKPEVIEIWNVVFIQYNRENDGSLKELPNKHIDTGLGFERLASILQGKMSNYD 285

[Close]

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Match: A0A7R9WBZ2_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WBZ2_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.310e-52
Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 RYLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDIPEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNFE 101
            +YLP ERVLPFD+KDNFWEMG  GPCGPCTEIHYDRIG R+AA  VN D+P+VIEIWN VFIQYNRESDGSL+ LP +HVDTGMGFER+ SILQ  D N++
Sbjct:  144 KYLPPERVLPFDAKDNFWEMGATGPCGPCTEIHYDRIGDRDAAGLVNADLPDVIEIWNNVFIQYNRESDGSLRPLPARHVDTGMGFERLTSILQGKDSNYD 244

[Close]

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Match: M4BPE4_HYAAE (Alanine--tRNA ligase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BPE4_HYAAE)

HSP 1 Score: 174 bits (441), Expect = 1.770e-51
Identity = 76/101 (75.25%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 RYLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDIPEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNFE 101
            +YLP ERVLPF  KDNFWEMGDVGPCGPCTEIHYDRIG R+A++ VN D+P+VIEIWN VFIQ+NRE DG L  LP+KHVDTGMGFER+ASILQ  D N++
Sbjct:   96 QYLPSERVLPFGCKDNFWEMGDVGPCGPCTEIHYDRIGNRDASQLVNADVPDVIEIWNNVFIQFNREQDGKLVPLPHKHVDTGMGFERLASILQGKDSNYD 196

[Close]

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Match: A0A3M6VMI2_9STRA (Alanine--tRNA ligase n=3 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMI2_9STRA)

HSP 1 Score: 179 bits (453), Expect = 4.200e-50
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 0

Query:    2 YLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDIPEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNFE 101
            YLP ERVLPFD KDNFWEMGDVGPCGPCTEIHYDRIG R+AA  VN D+P+VIEIWN VFIQYNRE DG L  LP+KHVDTGMGFER+ASILQ  D N++
Sbjct:  197 YLPPERVLPFDCKDNFWEMGDVGPCGPCTEIHYDRIGNRDAASLVNADVPDVIEIWNNVFIQYNREQDGKLVQLPHKHVDTGMGFERLASILQGKDSNYD 296

[Close]

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Match: A0A7S1G622_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G622_9STRA)

HSP 1 Score: 174 bits (442), Expect = 4.210e-50
Identity = 74/101 (73.27%), Postives = 89/101 (88.12%), Query Frame = 0

Query:    1 RYLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDIPEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNFE 101
            +Y+PE R+LPFD KDNFWEMG+VGPCGPCTEIHYDRIGGR+AA  VNMD P+V+EIWNLVF+Q+NR +DGSL+ LP+KHVDTGMGFERV S+LQ    N++
Sbjct:   37 KYMPESRILPFDKKDNFWEMGEVGPCGPCTEIHYDRIGGRDAAYLVNMDDPDVLEIWNLVFMQFNRLADGSLRPLPDKHVDTGMGFERVTSVLQGKRSNYD 137

[Close]

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Match: A0A7S3CBE2_9CHLO (Alanine--tRNA ligase (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CBE2_9CHLO)

HSP 1 Score: 171 bits (432), Expect = 5.740e-50
Identity = 72/101 (71.29%), Postives = 86/101 (85.15%), Query Frame = 0

Query:    1 RYLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDIPEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNFE 101
            + LPE +V+PFD+KDNFWEMGD GPCGPCTE+H+DR+GGR+A+  VNMD PEVIEIWNLVFIQ+NRE  G LK LPNKHVDTGMGFER+ S+LQ    N++
Sbjct:  241 KILPESQVMPFDTKDNFWEMGDTGPCGPCTELHFDRVGGRDASSLVNMDDPEVIEIWNLVFIQFNREPSGELKTLPNKHVDTGMGFERIVSVLQNKMSNYD 341

[Close]

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Match: A0A7S2B956_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B956_9STRA)

HSP 1 Score: 163 bits (412), Expect = 6.320e-50
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 0

Query:    1 RYLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDIPEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNFE 101
            ++LPE RVLPFD  DNFWEMGD GPCGPC+EIH DRIGGR+AA  VN D P V+EIWNLVFIQYNRE+D +L+ LP++HVDTGMGFER+ SILQ    N++
Sbjct:    9 QFLPESRVLPFDRADNFWEMGDTGPCGPCSEIHVDRIGGRDAAHLVNADDPNVVEIWNLVFIQYNREADSALRLLPSQHVDTGMGFERLVSILQNKQSNYD 109

[Close]

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Match: A0A1Z5KGA1_FISSO (Alanine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGA1_FISSO)

HSP 1 Score: 177 bits (449), Expect = 1.370e-49
Identity = 78/101 (77.23%), Postives = 89/101 (88.12%), Query Frame = 0

Query:    1 RYLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDIPEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNFE 101
            +YLPE RVLPFD+KDNFWEMG  GPCGPCTEIHYDRIGGR+AAK VN D+P+VIEIWN VFIQYNRE+DGSL+ LP +HVDTGMGFER+ SILQ  D N++
Sbjct:  162 KYLPENRVLPFDAKDNFWEMGATGPCGPCTEIHYDRIGGRDAAKLVNADLPDVIEIWNNVFIQYNREADGSLRPLPAQHVDTGMGFERLTSILQNVDSNYD 262

[Close]

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Match: A0A7S3L1R5_9STRA (Alanine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1R5_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.390e-49
Identity = 78/101 (77.23%), Postives = 89/101 (88.12%), Query Frame = 0

Query:    1 RYLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDIPEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNFE 101
            +YLP ERVLPFD+KDNFWEMG  GPCGPCTEIHYDRIGGR+AAK VN D+P+VIEIWN VFIQYNRE+DGSL+ LP +HVDTGMGFER+ SILQ  D N++
Sbjct:  166 QYLPPERVLPFDAKDNFWEMGATGPCGPCTEIHYDRIGGRDAAKLVNADLPDVIEIWNNVFIQYNREADGSLRPLPAQHVDTGMGFERLTSILQGVDSNYD 266

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot

BLAST of mRNA_H-elongata_contig138894.2710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A425CDZ1_9STRA	6.820e-53	79.00	Alanine--tRNA ligase n=1 Tax=Peronospora effusa Ta...	[more]
D7FPP9_ECTSI	1.070e-52	80.20	Alanine--tRNA ligase n=1 Tax=Ectocarpus siliculosu...	[more]
A0A7R9WBZ2_9STRA	1.310e-52	76.24	Alanine--tRNA ligase (Fragment) n=1 Tax=Pseudictyo...	[more]
M4BPE4_HYAAE	1.770e-51	75.25	Alanine--tRNA ligase n=1 Tax=Hyaloperonospora arab...	[more]
A0A3M6VMI2_9STRA	4.200e-50	79.00	Alanine--tRNA ligase n=3 Tax=Peronospora effusa Ta...	[more]
A0A7S1G622_9STRA	4.210e-50	73.27	Alanine--tRNA ligase (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A7S3CBE2_9CHLO	5.740e-50	71.29	Alanine--tRNA ligase (Fragment) n=1 Tax=Chloropico...	[more]
A0A7S2B956_9STRA	6.320e-50	70.30	Alanine--tRNA ligase (Fragment) n=1 Tax=Florenciel...	[more]
A0A1Z5KGA1_FISSO	1.370e-49	77.23	Alanine--tRNA ligase n=2 Tax=Fistulifera solaris T...	[more]
A0A7S3L1R5_9STRA	1.390e-49	77.23	Alanine--tRNA ligase n=1 Tax=Amphora coffeiformis ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002318	Alanine-tRNA ligase, class IIc	PRINTS	PR00980	TRNASYNTHALA	coord: 54..65 score: 68.91 coord: 81..94 score: 65.11
IPR018164	Alanyl-tRNA synthetase, class IIc, N-terminal	PFAM	PF01411	tRNA-synt_2c	coord: 3..101 e-value: 1.4E-36 score: 126.2
None	No IPR available	GENE3D	3.30.930.10		coord: 1..96 e-value: 3.0E-41 score: 143.4
None	No IPR available	PANTHER	PTHR11777:SF9	ALANINE--TRNA LIGASE, CYTOPLASMIC	coord: 2..101
None	No IPR available	PANTHER	PTHR11777	ALANYL-TRNA SYNTHETASE	coord: 2..101
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 2..100
IPR018165	Alanyl-tRNA synthetase, class IIc, core domain	PROSITE	PS50860	AA_TRNA_LIGASE_II_ALA	coord: 1..101 score: 21.63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig138894	contig	H-elongata_contig138894:709..1603 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig138894.2710.1	mRNA_H-elongata_contig138894.2710.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig138894 709..1603 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig138894.2710.1 ID=prot_H-elongata_contig138894.2710.1|Name=mRNA_H-elongata_contig138894.2710.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
RYLPEERVLPFDSKDNFWEMGDVGPCGPCTEIHYDRIGGRNAAKDVNMDI
PEVIEIWNLVFIQYNRESDGSLKDLPNKHVDTGMGFERVASILQASDDNF
E

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002318	Ala-tRNA-lgiase_IIc
IPR018164	Ala-tRNA-synth_IIc_N
IPR018165	Ala-tRNA-synth_IIc_core