mRNA_H-elongata_contig137964.2660.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Match: D8LLZ6_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLZ6_ECTSI) HSP 1 Score: 284 bits (726), Expect = 5.260e-90 Identity = 145/210 (69.05%), Postives = 166/210 (79.05%), Query Frame = 1
Query: 1 SMAGFSDEVSIWLAAVTAAAQSAGVCLGLYFVEVCGRRQLVLTSLSLVVCALVSLGAGFYLYDDA---EQSTMFLSTLTSTXXXXXXXNANAYGWLVVGAMMAYLFTFGIGMSSVPWTVNAEIYPNYARSLGTSASTTTNWLGNVLVSATFLSLANDRVLGKPGAFWLYGSIGVAGWIWLYICMPETKGLSLEEIEMLFAREGDPPRPGE 621
SMAGFSD+ SIWLAAVTAAAQS GVC+G+YF+E CGRR L LTSL +V ALV LG GF+LYDDA ++S + A Y ++VVG MMAYLFTFG+GMSS+PWTVNAEIYPN+ARSLGTSASTT NWLGNV+VSATFL+LA+D LGK GAFWLY SI VAGW+WL+ MPETKGL LEEIE+LFAREGDP RPG+
Sbjct: 318 SMAGFSDDASIWLAAVTAAAQSVGVCIGIYFIEKCGRRTLALTSLGMVSTALVLLGLGFHLYDDAVAVDESAL----------------AKRYAYMVVGTMMAYLFTFGVGMSSLPWTVNAEIYPNHARSLGTSASTTVNWLGNVVVSATFLTLASDAALGKDGAFWLYASIAVAGWVWLFCSMPETKGLPLEEIELLFAREGDPWRPGD 511
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Match: A0A7S2XTN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTN3_9STRA) HSP 1 Score: 154 bits (388), Expect = 7.030e-42 Identity = 99/262 (37.79%), Postives = 139/262 (53.05%), Query Frame = 1
Query: 1 SMAGFSDEVSIWLAAVTAAAQSAGVCLGLYFVEVCGRRQLVLTSLSLVVCALVSLGAGFYLYDD--------------AEQSTMFLSTLTS--------------------------------TXXXXXXXNANAYG-----W------------LVVGAMMAYLFTFGIGMSSVPWTVNAEIYPNYARSLGTSASTTTNWLGNVLVSATFLSLANDRVLGKPGAFWLYGSIGVAGWIWLYICMPETKGLSLEEIEMLFARE 597
+MAG+S+E+SIWL+ TA AQ AGV +GL+ V+ GR+ L+LTSL +V +L LG F + ++ + ++ + T T + + YG W L V AM+ YL +FGIGMS +PWT+ +EIYP R+L T+ ST NW GNVLVSA+FLS+A+ VLG GAFWLY IG+ G++WL +PETKGL+LE+IE LF+++
Sbjct: 81 NMAGYSNEISIWLSGYTALAQFAGVMIGLFLVDRVGRKPLLLTSLGMVTLSLGLLGFSFVSMANNSPVVNFAPDPQCASDHNWLWGNVATKNCAKCLDIAGCGFCGSPDGAGYCVPIGEDGRPTGECSTFQSLDNYGVDFDPWTTDTCAVEGGGTLSVVAMVLYLLSFGIGMSGLPWTLTSEIYPQKTRALMTAVSTGVNWAGNVLVSASFLSIASPAVLGPNGAFWLYALIGLNGFLWLSFNLPETKGLTLEQIESLFSKQ 342
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Match: A0A8J9X216_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X216_PHATR) HSP 1 Score: 154 bits (388), Expect = 8.750e-42 Identity = 69/114 (60.53%), Postives = 86/114 (75.44%), Query Frame = 1
Query: 262 NAYGWLVVGAMMAYLFTFGIGMSSVPWTVNAEIYPNYARSLGTSASTTTNWLGNVLVSATFLSLANDRVLGKPGAFWLYGSIGVAGWIWLYICMPETKGLSLEEIEMLFAREGD 603
NA+GWL V M+AYLF FG+GM +PWT+N+EIYP RSL S ST TNW+GN++V+ATFLSL++ L GAFWLY S+ + G +WLY +PETKGLSLE+IE LF R GD
Sbjct: 199 NAFGWLSVFFMVAYLFAFGVGMGGLPWTINSEIYPLRHRSLAVSCSTATNWIGNLIVAATFLSLSSPATLTTYGAFWLYASVAIVGLLWLYFALPETKGLSLEDIEKLFRRPGD 312
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Match: A0A836CJI9_9STRA (Solute carrier family 2, member 13-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJI9_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.060e-41 Identity = 75/113 (66.37%), Postives = 85/113 (75.22%), Query Frame = 1
Query: 265 AYGWLVVGAMMAYLFTFGIGMSSVPWTVNAEIYPNYARSLGTSASTTTNWLGNVLVSATFLSLANDRVLGKPGAFWLYGSIGVAGWIWLYICMPETKGLSLEEIEMLFAREGD 603
A GWL +M+AYL FGIG+SSVPWTVNAEIYP ARSLGTS ST NW GNV+VSATFLS+A L + GAFWLY ++ VAGW W MPET GLSLEE+E LF R+GD
Sbjct: 472 ALGWLAALSMVAYLACFGIGLSSVPWTVNAEIYPQRARSLGTSVSTCVNWAGNVVVSATFLSIAAPTALSQHGAFWLYAAVAVAGWAWARAAMPETAGLSLEEVEALFERDGD 584
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Match: A0A7S0CCY5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCY5_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.870e-40 Identity = 64/114 (56.14%), Postives = 84/114 (73.68%), Query Frame = 1
Query: 262 NAYGWLVVGAMMAYLFTFGIGMSSVPWTVNAEIYPNYARSLGTSASTTTNWLGNVLVSATFLSLANDRVLGKPGAFWLYGSIGVAGWIWLYICMPETKGLSLEEIEMLFAREGD 603
N +GW+ V M+ YLF FG+GM +PWT+N+EIYP RSL S ST TNW+GN++VSATFL++++ VL GAFWLYG+I + G +WL+ +PET GLSLE+IE LF R D
Sbjct: 83 NPFGWMSVFFMVVYLFAFGVGMGGLPWTINSEIYPLKHRSLAVSFSTATNWIGNIVVSATFLTISSSSVLTSAGAFWLYGAISLCGLMWLFFALPETTGLSLEDIEKLFRRSSD 196
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Match: A0A7S3XQ08_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ08_HETAK) HSP 1 Score: 143 bits (360), Expect = 4.450e-40 Identity = 66/110 (60.00%), Postives = 80/110 (72.73%), Query Frame = 1
Query: 268 YGWLVVGAMMAYLFTFGIGMSSVPWTVNAEIYPNYARSLGTSASTTTNWLGNVLVSATFLSLANDRVLGKPGAFWLYGSIGVAGWIWLYICMPETKGLSLEEIEMLFARE 597
Y WL AM+ YL FG+GMSSVPWTVNAEIYP + RS T+ +T+ NW GNVLVSA+FL+LA+ L GAFWLY ++G AGW+WL+ MPET+GL LEEI F E
Sbjct: 35 YAWLAAAAMVGYLLAFGVGMSSVPWTVNAEIYPLHVRSACTALATSVNWAGNVLVSASFLTLASPAWLQPHGAFWLYAAVGCAGWVWLWARMPETRGLGLEEIVARFRGE 144
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Match: B7FYT5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYT5_PHATC) HSP 1 Score: 154 bits (388), Expect = 5.530e-40 Identity = 69/114 (60.53%), Postives = 86/114 (75.44%), Query Frame = 1
Query: 262 NAYGWLVVGAMMAYLFTFGIGMSSVPWTVNAEIYPNYARSLGTSASTTTNWLGNVLVSATFLSLANDRVLGKPGAFWLYGSIGVAGWIWLYICMPETKGLSLEEIEMLFAREGD 603
NA+GWL V M+AYLF FG+GM +PWT+N+EIYP RSL S ST TNW+GN++V+ATFLSL++ L GAFWLY S+ + G +WLY +PETKGLSLE+IE LF R GD
Sbjct: 487 NAFGWLSVFFMVAYLFAFGVGMGGLPWTINSEIYPLRHRSLAVSCSTATNWIGNLIVAATFLSLSSPATLTTYGAFWLYASVAIVGLLWLYFALPETKGLSLEDIEKLFRRPGD 600
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Match: A0A7S0L6W7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L6W7_9EUKA) HSP 1 Score: 148 bits (373), Expect = 4.280e-39 Identity = 88/199 (44.22%), Postives = 112/199 (56.28%), Query Frame = 1
Query: 22 EVSIWLAAVTAAAQSAGVCLGLYFVEVCGRRQLVLTSLSLVVCALVSLGAGFYLYD------DAEQSTMFLSTLTSTXXXXXXXNANAYGWLVVGAMMAYLFTFGIGMSSVPWTVNAEIYPNYARSLGTSASTTTNWLGNVLVSATFLSLANDRVLGKPGAFWLYGSIGVAGWIWLYICMPETKGLSLEEIEMLFAREG 600
+V IWL A A+AQ AG LG+ V+ GRR LVLTSL +V L+ GA F D D E T+ + G++ + AM YL FGIGM+ VPW VNAEIYP R++G +TT NW+ N+LVS TFLSL + + +P FWLYG+ G +WL+ MPET SLEEIE LF+ G
Sbjct: 218 QVLIWLTAPVASAQLAGCLLGMQLVDRWGRRPLVLTSLFGIVLTLLMEGAAFGFSDWFCDSHDTENHTLHAL-------------CDVTGYISLCAMAGYLIIFGIGMAPVPWLVNAEIYPLDVRAMGVGIATTINWISNLLVSLTFLSL--EEAISRPATFWLYGACAAVGAVWLHFRMPETANKSLEEIEQLFSVPG 401
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Match: A0A6U0HHS3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0HHS3_9STRA) HSP 1 Score: 140 bits (352), Expect = 4.850e-39 Identity = 68/114 (59.65%), Postives = 80/114 (70.18%), Query Frame = 1
Query: 262 NAYGWLVVGAMMAYLFTFGIGMSSVPWTVNAEIYPNYARSLGTSASTTTNWLGNVLVSATFLSLANDRVLGKPGAFWLYGSIGVAGWIWLYICMPETKGLSLEEIEMLFAREGD 603
N +G + V M+AYL FGIGM +PWT+N+EIYP RSL S ST TNW+ N+LVSATFLS+A+ L GAFWLY SI GW WLY +PETKGLSLEEIE LF + D
Sbjct: 11 NRFGVMSVFFMVAYLLAFGIGMGPLPWTINSEIYPLTHRSLAVSLSTATNWISNLLVSATFLSIASPGALTTYGAFWLYTSIAFLGWCWLYYALPETKGLSLEEIENLFRKGED 124
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Match: A0A7S4MW95_9STRA (Hypothetical protein n=6 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MW95_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.070e-38 Identity = 69/114 (60.53%), Postives = 85/114 (74.56%), Query Frame = 1
Query: 262 NAYGWLVVGAMMAYLFTFGIGMSSVPWTVNAEIYPNYARSLGTSASTTTNWLGNVLVSATFLSLANDRVLGKPGAFWLYGSIGVAGWIWLYICMPETKGLSLEEIEMLFAREGD 603
N YGW+ V M+AYL FG+GM +PWT+N+EIYP + RSL S ST TNW GN++VSATFL++A+ VL GAFWLYG++ + G IWLY +PETKGLSLEEIE LF GD
Sbjct: 467 NEYGWMPVMFMVAYLLAFGVGMGGLPWTINSEIYPLHHRSLAVSFSTATNWSGNMIVSATFLTIASPAVLTTHGAFWLYGAVALLGIIWLYSALPETKGLSLEEIEELFRMPGD 580 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig137964.2660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig137964.2660.1 >prot_H-elongata_contig137964.2660.1 ID=prot_H-elongata_contig137964.2660.1|Name=mRNA_H-elongata_contig137964.2660.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp MAGFSDEVSIWLAAVTAAAQSAGVCLGLYFVEVCGRRQLVLTSLSLVVCAback to top mRNA from alignment at H-elongata_contig137964:305..925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig137964.2660.1 ID=mRNA_H-elongata_contig137964.2660.1|Name=mRNA_H-elongata_contig137964.2660.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=621bp|location=Sequence derived from alignment at H-elongata_contig137964:305..925+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig137964:305..925+ >mRNA_H-elongata_contig137964.2660.1 ID=mRNA_H-elongata_contig137964.2660.1|Name=mRNA_H-elongata_contig137964.2660.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1236bp|location=Sequence derived from alignment at H-elongata_contig137964:305..925+ (Himanthalia elongata Himel1 dioecious)back to top |