prot_H-elongata_contig136118.2556.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig136118.2556.1
Unique Nameprot_H-elongata_contig136118.2556.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length112
Homology
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Match: D7FI54_ECTSI (Radical SAM core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI54_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 2.360e-66
Identity = 105/112 (93.75%), Postives = 111/112 (99.11%), Query Frame = 0
Query:    1 MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEWALIQGENDSAEV 112
            MGMGEPLANYKNV++AVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRER AL+PVNRRFPLSEL+DACRE+VD+SGRRMTFEWALIQGENDSAEV
Sbjct:  140 MGMGEPLANYKNVMEAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERGALLPVNRRFPLSELMDACREYVDVSGRRMTFEWALIQGENDSAEV 251          
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Match: A0A6H5KMC8_9PHAE (Radical SAM core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMC8_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 1.490e-63
Identity = 105/112 (93.75%), Postives = 111/112 (99.11%), Query Frame = 0
Query:    1 MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEWALIQGENDSAEV 112
            MGMGEPLANYKNV++AVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRER AL+PVNRRFPLSEL+DACRE+VD+SGRRMTFEWALIQGENDSAEV
Sbjct:  424 MGMGEPLANYKNVMEAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERGALLPVNRRFPLSELMDACREYVDVSGRRMTFEWALIQGENDSAEV 535          
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Match: A0A836CIK3_9STRA (Radical SAM core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIK3_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.360e-57
Identity = 91/109 (83.49%), Postives = 104/109 (95.41%), Query Frame = 0
Query:    1 MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEWALIQGENDS 109
            MGMGEPLANY NV++AVRRIN++LGIGARHITISTVGLVPRI RL+QE++QVKLAVSLHAAND+ERSAL+PVNRRFPL+EL+DAC+ +VD SGRRMTFEWALI GENDS
Sbjct:  150 MGMGEPLANYANVMEAVRRINSQLGIGARHITISTVGLVPRIQRLAQEDLQVKLAVSLHAANDKERSALLPVNRRFPLAELMDACKAYVDQSGRRMTFEWALIHGENDS 258          
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Match: A0A7S0HUF2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUF2_9CRYP)

HSP 1 Score: 170 bits (431), Expect = 3.480e-51
Identity = 80/112 (71.43%), Postives = 99/112 (88.39%), Query Frame = 0
Query:    1 MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEWALIQGENDSAEV 112
            MGMGEPL NY NV++AVRRIN ++GIGARHITISTVGLVPRI RL+ EN+Q+KLAVSLHAA D ER+A++PVN RFPLSEL++ C+ +V+ +GRR++FEWALI G+NDS EV
Sbjct:   73 MGMGEPLGNYNNVMEAVRRINQDIGIGARHITISTVGLVPRIRRLADENMQIKLAVSLHAATDEERNAIMPVNLRFPLSELMETCKFYVEKTGRRISFEWALIAGQNDSPEV 184          
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Match: A0A7S0MAH2_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MAH2_9CRYP)

HSP 1 Score: 166 bits (420), Expect = 9.800e-50
Identity = 79/112 (70.54%), Postives = 95/112 (84.82%), Query Frame = 0
Query:    1 MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEWALIQGENDSAEV 112
            MGMGEPL NY NV+ AVRR+N E+GIGARHITISTVGLVPRI RL++E +Q+KLAVSLHAA D  RSA++PVN RFPL EL+ ACRE+V ++GRR+TFEWALI G ND+ + 
Sbjct:   35 MGMGEPLGNYNNVLTAVRRMNDEIGIGARHITISTVGLVPRIRRLAEEGLQIKLAVSLHAATDEARSAIMPVNLRFPLKELMAACREYVALTGRRVTFEWALIAGRNDTPDA 146          
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Match: A0A7S1DYM6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DYM6_HEMAN)

HSP 1 Score: 171 bits (434), Expect = 2.420e-49
Identity = 83/112 (74.11%), Postives = 98/112 (87.50%), Query Frame = 0
Query:    1 MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEWALIQGENDSAEV 112
            MGMGEPL NY NV+ AVRR+N E+GIGARHITISTVGLVPRI RLS+E +QVKLAVSLHAANDRERS ++PVN RFPLSEL+ ACR+++  +GRR+TFEWALI G+ND+ E 
Sbjct:  264 MGMGEPLGNYNNVLTAVRRMNEEVGIGARHITISTVGLVPRIQRLSKEGLQVKLAVSLHAANDRERSEMMPVNVRFPLSELMQACRDYIRDTGRRITFEWALIAGKNDTPET 375          
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Match: L1JN17_GUITC (Radical SAM core domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JN17_GUITC)

HSP 1 Score: 169 bits (427), Expect = 1.070e-48
Identity = 78/112 (69.64%), Postives = 101/112 (90.18%), Query Frame = 0
Query:    1 MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEWALIQGENDSAEV 112
            MGMGEPL NY NV++AVRRIN +LGIGARHITISTVGLVPRI RL++EN+Q+KLAVSLHAA+D ER+A++PVN RFPL++L++ C+ +V+ +GRR++FEWALI G+ND+ EV
Sbjct:  205 MGMGEPLGNYNNVMEAVRRINQDLGIGARHITISTVGLVPRIRRLAEENMQIKLAVSLHAASDEERNAIMPVNLRFPLADLMETCKFYVEKTGRRISFEWALIAGQNDTPEV 316          
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Match: A0A7S3XS11_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS11_HETAK)

HSP 1 Score: 161 bits (408), Expect = 1.520e-47
Identity = 75/112 (66.96%), Postives = 99/112 (88.39%), Query Frame = 0
Query:    1 MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEWALIQGENDSAEV 112
            MGMGEPL NYKNV+ AVR IN ++GIGARHITISTVGLVPRI +L++E++Q+KLA+SLHAAND +RSAL+PVNRR+ L++L+DAC  ++ ++ RR+TFE+ALI GEND+ +V
Sbjct:   65 MGMGEPLNNYKNVMKAVRFINQDIGIGARHITISTVGLVPRIHKLAEEDVQIKLAISLHAANDEDRSALLPVNRRYNLNQLMDACENYIKITNRRITFEYALIAGENDTPQV 176          
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Match: A0A7Y5Q9W6_9CHLR (Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7Y5Q9W6_9CHLR)

HSP 1 Score: 163 bits (412), Expect = 4.870e-47
Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 0
Query:    1 MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEWALIQGENDSAE 111
            MGMGEP  NY   V AVRR+  +LGIGARHITISTVGLVP I R ++E +QVKLAVSLHAA D+ERSAL+PVNRR+PL+EL+DACR++ + SGRRM+FEW LIQG+ND+ E
Sbjct:  158 MGMGEPFHNYDASVAAVRRLMNDLGIGARHITISTVGLVPMIRRFAEEGLQVKLAVSLHAATDKERSALLPVNRRYPLNELIDACRDYTERSGRRMSFEWTLIQGQNDTPE 268          
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Match: A0A399YX88_9CHLR (Probable dual-specificity RNA methyltransferase RlmN n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A399YX88_9CHLR)

HSP 1 Score: 159 bits (403), Expect = 8.530e-46
Identity = 77/111 (69.37%), Postives = 94/111 (84.68%), Query Frame = 0
Query:    1 MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENIQVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEWALIQGENDSAE 111
            MGMGEP  NY+  + AVRR+  +LGIGARHITISTVGLVP+I R + E +QV+LA+SLHAA D ERSAL+P+N+R+PL+ELLDACRE V+ +GRR+TFEWALI GENDS E
Sbjct:  159 MGMGEPFHNYEASLAAVRRLMADLGIGARHITISTVGLVPQIRRFADEALQVRLAISLHAATDDERSALLPINKRYPLAELLDACREVVEKTGRRVTFEWALIAGENDSPE 269          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig136118.2556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI54_ECTSI2.360e-6693.75Radical SAM core domain-containing protein n=1 Tax... [more]
A0A6H5KMC8_9PHAE1.490e-6393.75Radical SAM core domain-containing protein n=1 Tax... [more]
A0A836CIK3_9STRA3.360e-5783.49Radical SAM core domain-containing protein n=1 Tax... [more]
A0A7S0HUF2_9CRYP3.480e-5171.43Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S0MAH2_9CRYP9.800e-5070.54Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S1DYM6_HEMAN2.420e-4974.11Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
L1JN17_GUITC1.070e-4869.64Radical SAM core domain-containing protein n=2 Tax... [more]
A0A7S3XS11_HETAK1.520e-4766.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7Y5Q9W6_9CHLR4.870e-4770.27Probable dual-specificity RNA methyltransferase Rl... [more]
A0A399YX88_9CHLR8.530e-4669.37Probable dual-specificity RNA methyltransferase Rl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 1..109
e-value: 8.8E-9
score: 36.0
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..112
e-value: 1.6E-41
score: 144.3
IPR040072Methyltransferase (Class A)PANTHERPTHR3054423S RRNA METHYLTRANSFERASEcoord: 1..111
NoneNo IPR availablePANTHERPTHR30544:SF5DUAL-SPECIFICITY RNA METHYLTRANSFERASE RLMNcoord: 1..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig136118contigH-elongata_contig136118:330..1251 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig136118.2556.1mRNA_H-elongata_contig136118.2556.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig136118 330..1257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig136118.2556.1 ID=prot_H-elongata_contig136118.2556.1|Name=mRNA_H-elongata_contig136118.2556.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=112bp
MGMGEPLANYKNVVDAVRRINTELGIGARHITISTVGLVPRILRLSQENI
QVKLAVSLHAANDRERSALIPVNRRFPLSELLDACREFVDMSGRRMTFEW
ALIQGENDSAEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007197rSAM
IPR013785Aldolase_TIM
IPR040072Methyltransferase_A