prot_H-elongata_contig135057.2474.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig135057.2474.1
Unique Nameprot_H-elongata_contig135057.2474.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length181
Homology
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Match: A0A6H5L508_9PHAE (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L508_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 9.470e-67
Identity = 130/195 (66.67%), Postives = 143/195 (73.33%), Query Frame = 0
Query:    2 MMGRLPTRNRQSFPRLASSLQYARVTSVSAGYAHSIAVTDQGRAFASGQNDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLARVLLSKKASS---------------NEQAELYVWGGGRLGQLGLGAPSTRLAPTHNQPLSGVGGGVVSVSAGANHSVCVVASGLVFGWGHAEYNQQGVA 181
            M+ RLPTR+RQ  PRLA+SL+  RVTS+SAGYAHS+AVTDQGRAF+SGQNDRGQ    H        IHSG FREVVGMA  F LEVACGEQHNLARVL S                    ++QAEL+VWGGGRLGQLGLGA ST+LAPTHN  LS VGGGVVSVSAGANHSVC +ASGLV  WG +EY QQG A
Sbjct:  233 MLERLPTRSRQPVPRLATSLRGLRVTSISAGYAHSVAVTDQGRAFSSGQNDRGQLGLAHR-------IHSGIFREVVGMAGRFFLEVACGEQHNLARVLPSSDXXXXXXXXXXXXXXXXXLDQQAELFVWGGGRLGQLGLGAASTKLAPTHNPLLSDVGGGVVSVSAGANHSVCAMASGLVMSWGASEYCQQGCA 420          
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Match: A0A7R9U535_9STRA (Hypothetical protein n=3 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U535_9STRA)

HSP 1 Score: 116 bits (290), Expect = 8.140e-27
Identity = 76/181 (41.99%), Postives = 103/181 (56.91%), Query Frame = 0
Query:    3 MGRLPTRNRQSF-PRLASSLQYARVTSVSAGYAHSIAVTDQGRAFASGQNDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLARVLLSKKASSNEQAELYVWGGGRLGQLGLGAPST---RLAPTHNQPLSGVGGGVVSVSAGANHSVCVVASGLVFGWGHAEYNQQG 179
            M R+ T    SF P +  SL   ++  VSAGY H +A++D GR F +G NDRGQ        G G  I++ KF++V   A+  +L+V CG+QH +ARV  S  A  +  +E++VWG G LGQLGLG       RL P     L      V+ ++AGANHS+ +  +G VF WGH EY Q G
Sbjct:  233 MLRMRTTRAPSFRPVVVESLLGTKIVRVSAGYGHIMALSDSGRLFGAGYNDRGQL-------GLGHRINTAKFQQVRTFADRRVLQVVCGQQHTIARVESSTGAKESTLSEVFVWGNGVLGQLGLGRRGISKGRLVPHRLATLDDQN--VIDIAAGANHSLALSDTGDVFFWGHTEYGQSG 404          
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Match: A0A7R9YAY1_9STRA (Hypothetical protein n=3 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAY1_9STRA)

HSP 1 Score: 116 bits (290), Expect = 8.320e-27
Identity = 76/181 (41.99%), Postives = 103/181 (56.91%), Query Frame = 0
Query:    3 MGRLPTRNRQSF-PRLASSLQYARVTSVSAGYAHSIAVTDQGRAFASGQNDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLARVLLSKKASSNEQAELYVWGGGRLGQLGLGAPST---RLAPTHNQPLSGVGGGVVSVSAGANHSVCVVASGLVFGWGHAEYNQQG 179
            M R+ T    SF P +  SL   ++  VSAGY H +A++D GR F +G NDRGQ        G G  I++ KF++V   A+  +L+V CG+QH +ARV  S  A  +  +E++VWG G LGQLGLG       RL P     L      V+ ++AGANHS+ +  +G VF WGH EY Q G
Sbjct:  233 MLRMRTTRAPSFRPVVVESLLGTKIVRVSAGYGHIMALSDSGRLFGAGYNDRGQL-------GLGHRINTAKFQQVRTFADRRVLQVVCGQQHTIARVESSTGAKESTLSEVFVWGNGVLGQLGLGRRGISKGRLVPHRLATLDDQN--VIDIAAGANHSLALSDTGDVFFWGHTEYGQSG 404          
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Match: A0A7S2RQ85_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RQ85_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.540e-24
Identity = 75/201 (37.31%), Postives = 101/201 (50.25%), Query Frame = 0
Query:   15 PRLASSLQYARVTSVSAGYAHSIAVTDQGRAFASGQNDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLARVLLSKKASSNEQAELYVWGGGRLGQLGLGAPST-------------RLAPTHNQPLSGVGG---------------------GVVSVSAGANHSVCVVASGLVFGWGHAEYNQQGVA 181
            P L +SLQ  R++ VSAG+ H++A+T+ GR F+ G NDRGQ        G G  ++S  F+ V  +AN    ++ CG+QHNLA V ++      +   ++ WG G LGQLGLG   T               +P  N+     GG                      VV ++AGANHSVCVV+ G VF WGH EY Q G A
Sbjct:  243 PVLCTSLQGHRISMVSAGFGHTLALTEGGRVFSCGYNDRGQL-------GLGHRMNSSSFQLVRALANKRCSKIVCGQQHNLALVSVAP-----DHEVVFTWGNGALGQLGLGRSVTGRRTPVVVPGILAAASPADNEDKGKSGGLAASAEPAGLAEFAGFLAKSVSVVDIAAGANHSVCVVSDGSVFTWGHGEYGQHGSA 431          
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Match: A0A7S2AN21_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AN21_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.870e-21
Identity = 69/173 (39.88%), Postives = 92/173 (53.18%), Query Frame = 0
Query:    8 TRNRQSFPRLASSLQYARVTSVSAGYAHSIAVTDQGRAFASGQNDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLARVLLSKKASSNEQAELYVWGGGRLGQLGLGAPST-RLAPTHNQPLSGVGGGVVSVSAGANHSVCVVASGLVFGWGHAEYNQQG 179
            TR     P LA+SL+  ++  ++AGY H++A+   GR F+ G NDRGQ        G G  I+   F+ +  +    + +VACG+QH LAR            +E+ VWG G LGQLGLG   T R  P     LS     +V V+AG NHSV V + G V+ WGH EY Q G
Sbjct:  216 TRRPVPIPFLATSLEGIQIAQLAAGYGHNLALAKDGRVFSCGYNDRGQL-------GLGHRINCADFQHIERLVG--VTQVACGQQHCLART----------SSEVMVWGNGALGQLGLGRTVTSRRVPVAIDSLSDRT--IVDVAAGGNHSVAVDSDGCVWTWGHGEYGQHG 367          
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Match: A0A484ECX6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECX6_BRELC)

HSP 1 Score: 94.7 bits (234), Expect = 2.610e-19
Identity = 59/162 (36.42%), Postives = 86/162 (53.09%), Query Frame = 0
Query:   26 VTSVSAGYAHSIAVTDQGRAFASGQNDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLA--------RVLLSKKASSNEQAELYVWGGGRLGQLGLGAPSTRLAPTHNQPLSGVGGGVVSVSAGANHSVCVVASGLVFGWGHAEYNQQG 179
            VT+++AG+AHS+A T++G  F+ G ND GQ        G G+  +S +F+ +  +   FI  +ACG+QH+LA        + +  K   S+     + WG G LGQLG G   + L               VSV+AG++HSV V   G V+ WGH+EY Q G
Sbjct:  218 VTNIAAGFAHSLATTNEGAVFSCGYNDNGQL-------GLGSRRNSAEFQRITALEKYFIQHIACGQQHSLACSSLRDSTKAIKGKNECSDRSGVCFSWGLGVLGQLGTGENLSWLPAEVKLARP-----AVSVAAGSHHSVAVTDDGKVYTWGHSEYGQHG 367          
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Match: W2PHQ7_PHYPN (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2PHQ7_PHYPN)

HSP 1 Score: 94.4 bits (233), Expect = 3.560e-19
Identity = 64/173 (36.99%), Postives = 97/173 (56.07%), Query Frame = 0
Query:   15 PRLASSL-QYARVTSVSAGYAHSIAVTDQGRAFASGQNDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLA--RVLLSKKASSNEQAE-----LYVWGGGRLGQLGLGAPSTRLAPTHNQPLSGVGGGVVSVSAGANHSVCVVASGLVFGWGHAEYNQQG 179
            PRLA+ L     VT+++AG+AHS+A T+ G  F+ G ND GQ        G G+  +S +F+ +  +   FI  +ACG+QH+LA  R++   +A+++++ +      + WG G LGQLG G   + L               VSV+AG++HSV V   G V+ WGH+EY Q G
Sbjct:  206 PRLATGLLSRLVVTTIAAGFAHSLATTNDGAVFSCGYNDNGQL-------GLGSRRNSAEFQHIQALEGYFIEHIACGQQHSLACSRLIGPDEATNDDEPKSRSGVCFSWGLGVLGQLGTGVNKSWLPKEVKLARP-----AVSVAAGSHHSVAVTDDGKVYTWGHSEYGQHG 366          
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Match: A0A662WPY8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPY8_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.600e-19
Identity = 66/173 (38.15%), Postives = 97/173 (56.07%), Query Frame = 0
Query:   15 PRLA-SSLQYARVTSVSAGYAHSIAVTDQGRAFASGQNDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLA--RVLLSKKASSNEQAE-----LYVWGGGRLGQLGLGAPSTRLAPTHNQPLSGVGGGVVSVSAGANHSVCVVASGLVFGWGHAEYNQQG 179
            PRL   SL    VT+++AG+AHS+A T+ G  F+ G ND GQ        G G+  +S  FR +  ++   I ++ACG+QH+LA  R++ S+   S+E+        + WG G LGQLG G   + L P   + +       VS++AG++HSV V   G V+ WGH+EY Q G
Sbjct:  208 PRLCVGSLAKLVVTNIAAGFAHSLATTNDGAVFSCGYNDNGQL-------GLGSRRNSADFRRIEALSGYVIEQIACGQQHSLACSRLIESESPVSDEEPTSRSGVCFSWGLGVLGQLGSGTSISWL-PKEVKLVRPA----VSIAAGSHHSVAVTDDGKVYSWGHSEYGQHG 368          
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Match: A0A482SR83_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SR83_9ARCH)

HSP 1 Score: 89.0 bits (219), Expect = 1.470e-18
Identity = 52/120 (43.33%), Postives = 73/120 (60.83%), Query Frame = 0
Query:   12 QSFPRLASSLQYARVTSVSAGYAHSIAVTDQGRAFASGQNDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLARVLL----SKKASSNEQAELYVWGGGRLGQLGLG 127
            Q  P    SL   RVTS++AGYAH +A++ QGR +A+G NDRGQ        G G  I++  F+EV  +AN  +++VACG+QH+L R +       +      A++Y+WG G LGQLGLG
Sbjct:   96 QLLPIRVKSLSKVRVTSIAAGYAHVLALSVQGRVYAAGYNDRGQL-------GLGHRINTSLFKEVDFLANKLVVQVACGQQHSLCRAVERLVDGVEVGDKTGADVYIWGNGVLGQLGLG 208          
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Match: D0NEQ9_PHYIT (Regulator of chromosome condensation (RCC1)-like protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NEQ9_PHYIT)

HSP 1 Score: 91.3 bits (225), Expect = 4.180e-18
Identity = 64/173 (36.99%), Postives = 96/173 (55.49%), Query Frame = 0
Query:   15 PRLASS-LQYARVTSVSAGYAHSIAVTDQGRAFASGQNDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLA--RVLLSKKASSNEQAE-----LYVWGGGRLGQLGLGAPSTRLAPTHNQPLSGVGGGVVSVSAGANHSVCVVASGLVFGWGHAEYNQQG 179
            PRLA+  L    VT+++AG+AHS+A T++G  ++ G ND GQ        G G+  +S +F+ +  + + FI  +ACG+QH+LA  RV+   + S ++  +      + WG G LGQLG G   + L               VSV+AG++HSV V   G V+ WGH+EY Q G
Sbjct:  206 PRLATGPLARLVVTNIAAGFAHSLATTNEGAVYSCGYNDNGQL-------GLGSRRNSAEFQRIRALESYFIEHIACGQQHSLACSRVIDPGENSHDDDPKSRSGVCFSWGLGVLGQLGTGINKSWLPEEVKLARP-----AVSVAAGSHHSVAVTDDGKVYTWGHSEYGQHG 366          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig135057.2474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L508_9PHAE9.470e-6766.67BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7R9U535_9STRA8.140e-2741.99Hypothetical protein n=3 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9YAY1_9STRA8.320e-2741.99Hypothetical protein n=3 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2RQ85_9STRA1.540e-2437.31Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A7S2AN21_9STRA1.870e-2139.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A484ECX6_BRELC2.610e-1936.42Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
W2PHQ7_PHYPN3.560e-1936.99Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A662WPY8_9STRA6.600e-1938.15Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A482SR83_9ARCH1.470e-1843.33Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
D0NEQ9_PHYIT4.180e-1836.99Regulator of chromosome condensation (RCC1)-like p... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 151..167
score: 28.43
coord: 111..127
score: 27.45
coord: 26..39
score: 28.57
coord: 167..181
score: 34.44
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 112..161
e-value: 6.3E-11
score: 42.7
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 151..161
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 111..164
score: 14.383
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 1..42
score: 8.595
NoneNo IPR availablePFAMPF13540RCC1_2coord: 26..55
e-value: 2.0E-7
score: 30.6
NoneNo IPR availablePANTHERPTHR45622FAMILY NOT NAMEDcoord: 15..177
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 3..181
e-value: 5.2E-30
score: 106.4
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 8..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig135057contigH-elongata_contig135057:119..1522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig135057.2474.1mRNA_H-elongata_contig135057.2474.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig135057 119..1537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig135057.2474.1 ID=prot_H-elongata_contig135057.2474.1|Name=mRNA_H-elongata_contig135057.2474.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp
MMMGRLPTRNRQSFPRLASSLQYARVTSVSAGYAHSIAVTDQGRAFASGQ
NDRGQARQKHAGGGEGTPIHSGKFREVVGMANCFILEVACGEQHNLARVL
LSKKASSNEQAELYVWGGGRLGQLGLGAPSTRLAPTHNQPLSGVGGGVVS
VSAGANHSVCVVASGLVFGWGHAEYNQQGVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II