mRNA_H-elongata_contig134471.2446.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Match: A0A7S2Y0Z4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0Z4_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.570e-33 Identity = 55/81 (67.90%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 7 VDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAMEELTYDYGYVVGAVEGKNLSCHCGATACRGRL 249
VDAK YGNVARF+NHSC NL K V+VE+HDARMPR+A FA IPA+EELTYDYGY G+VEGK++ C CGA +CRG +
Sbjct: 36 VDAKWYGNVARFINHSCEPNLLKQTVYVETHDARMPRMALFATYDIPALEELTYDYGYTPGSVEGKHMICKCGANSCRGLM 116
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Match: A0A7R9YBQ7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ7_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.440e-32 Identity = 54/83 (65.06%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 1 LVVDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAMEELTYDYGYVVGAVEGKNLSCHCGATACRGRL 249
LVVDAK +GNVARF+NH C NL + +VF ES DARMPR+AFFA IPAM ELT+DYGY GAV+GK + C CG +CRG+L
Sbjct: 38 LVVDAKRFGNVARFLNHCCDPNLTRQIVFCESQDARMPRLAFFAATDIPAMTELTWDYGYRPGAVQGKTMECKCGVASCRGKL 120
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Match: A0A6H5K918_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K918_9PHAE) HSP 1 Score: 125 bits (314), Expect = 1.110e-31 Identity = 59/84 (70.24%), Postives = 67/84 (79.76%), Query Frame = 1
Query: 1 LVVDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAMEELTYDYGYVVGAVEGKNLSCHCGATACRGRLL 252
+ VDAK +GNVARFMNHSC GNL K MVFVE HD R+PRVAFF+ + I A EELTYDY Y VG+VEGK+L+C CGA CRG LL
Sbjct: 583 MAVDAKDFGNVARFMNHSCDGNLVKKMVFVEGHDFRIPRVAFFSLEKIQAYEELTYDYNYKVGSVEGKSLACRCGAPTCRGMLL 666
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Match: D7FM06_ECTSI (Similar to SET domain, bifurcated 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM06_ECTSI) HSP 1 Score: 124 bits (312), Expect = 2.460e-31 Identity = 59/84 (70.24%), Postives = 67/84 (79.76%), Query Frame = 1
Query: 1 LVVDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAMEELTYDYGYVVGAVEGKNLSCHCGATACRGRLL 252
+ VDAK +GNVARFMNHSC GNL K MVFVE HD R+PRVAFF+ + I A EELTYDY Y VG+VEGK+L C CGA +CRG LL
Sbjct: 929 MAVDAKDFGNVARFMNHSCDGNLVKKMVFVEGHDFRIPRVAFFSLEKIQAYEELTYDYNYKVGSVEGKSLVCRCGAPSCRGMLL 1012
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Match: A0A7S4DHE2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHE2_HETAK) HSP 1 Score: 114 bits (285), Expect = 5.230e-31 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 1 LVVDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAMEELTYDYGYVVGAVEGKNLSCHCGATACRGRL 249
L VDAK YGNV RF+NHSC NL K VFVE+HD R+PR+AFFA +PA ELTYDYGY+ +VEGK ++C CG++ CRGR+
Sbjct: 41 LCVDAKWYGNVGRFLNHSCDPNLCKQTVFVETHDVRVPRLAFFALWDVPAGAELTYDYGYLPDSVEGKQMACRCGSSNCRGRM 123
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Match: A0A1X7UPE3_AMPQE (Uncharacterized protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UPE3_AMPQE) HSP 1 Score: 113 bits (282), Expect = 4.440e-28 Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 4 VVDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAMEELTYDYGYVVGAVEGKNLSCHCGATACRGRLL 252
V+DA +YGNVARF+NHSC+ NL VFV+SHD R P VAFFA +IPA +L +DY Y++G+VEGK + C CG++ CRGRL+
Sbjct: 299 VIDASSYGNVARFINHSCSPNLFVQNVFVDSHDIRFPSVAFFAQSLIPAYSQLFWDYNYIIGSVEGKAVKCMCGSSNCRGRLI 381
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Match: A7SM02_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SM02_NEMVE) HSP 1 Score: 108 bits (270), Expect = 4.680e-28 Identity = 49/83 (59.04%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 4 VVDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAMEELTYDYGYVVGAVEGKNLSCHCGATACRGRLL 252
V+DAKAYGN R++NHSC+ NL VF+++HD R P VAFFA IPA ELT+DY Y VG+V+ K L C+CG++ CRGRLL
Sbjct: 98 VIDAKAYGNCGRYLNHSCSPNLFVQNVFIDTHDLRFPWVAFFAQHNIPAGSELTWDYMYEVGSVQDKELRCYCGSSECRGRLL 180
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Match: UPI00077AD076 (histone-lysine N-methyltransferase SETDB1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AD076) HSP 1 Score: 110 bits (274), Expect = 3.250e-26 Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 4 VVDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAMEELTYDYGYVVGAVEGKNLSCHCGATACRGRLL 252
V+DAKAYGN R++NHSC NL VFV++HD R P VAFF Q +PA ELT+DY Y VG+V+GK L C+CG+ CRGRLL
Sbjct: 637 VIDAKAYGNCGRYLNHSCTPNLFVQNVFVDTHDLRFPWVAFFTQQNVPAGTELTWDYAYEVGSVKGKVLHCYCGSAECRGRLL 719
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Match: UPI001CF239FA (histone-lysine N-methyltransferase SETDB1-like isoform X4 n=5 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF239FA) HSP 1 Score: 110 bits (274), Expect = 3.350e-26 Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 4 VVDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAMEELTYDYGYVVGAVEGKNLSCHCGATACRGRLL 252
V+DAKAYGN R++NHSC NL VFV++HD R P VAFF Q +PA ELT+DY Y VG+V+GK L C+CG+ CRGRLL
Sbjct: 1392 VIDAKAYGNCGRYLNHSCTPNLFVQNVFVDTHDLRFPWVAFFTQQNVPAGTELTWDYAYEVGSVKGKVLHCYCGSAECRGRLL 1474
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Match: L7MTC7_HORSE (Histone-lysine N-methyltransferase SETDB1-like protein (Fragment) n=2 Tax=Laurasiatheria TaxID=314145 RepID=L7MTC7_HORSE) HSP 1 Score: 103 bits (257), Expect = 4.640e-26 Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 4 VVDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAMEELTYDYGYVVGAVEGKNLSCHCGATACRGRLL 252
++DAK GN+ R++NHSC+ NL VFV++HD R P VAFFA + I A ELT+DY Y VG+VEGK L C CGA CRGRLL
Sbjct: 101 IIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL 183 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig134471.2446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig134471.2446.1 >prot_H-elongata_contig134471.2446.1 ID=prot_H-elongata_contig134471.2446.1|Name=mRNA_H-elongata_contig134471.2446.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp LVVDAKAYGNVARFMNHSCAGNLNKHMVFVESHDARMPRVAFFAPQIIPAback to top mRNA from alignment at H-elongata_contig134471:276..1629+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig134471.2446.1 ID=mRNA_H-elongata_contig134471.2446.1|Name=mRNA_H-elongata_contig134471.2446.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1354bp|location=Sequence derived from alignment at H-elongata_contig134471:276..1629+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig134471:276..1629+ >mRNA_H-elongata_contig134471.2446.1 ID=mRNA_H-elongata_contig134471.2446.1|Name=mRNA_H-elongata_contig134471.2446.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=510bp|location=Sequence derived from alignment at H-elongata_contig134471:276..1629+ (Himanthalia elongata Himel1 dioecious)back to top |