prot_H-elongata_contig134341.2437.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig134341.2437.1
Unique Name	prot_H-elongata_contig134341.2437.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	111

Homology

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BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Match: A0A6H5L4Y6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y6_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 3.040e-30
Identity = 71/113 (62.83%), Postives = 80/113 (70.80%), Query Frame = 0

Query:    1 QKTSGSSNQPKRASPDSGFLRGGAATKKNL--------AGKATRKRLTLGEKLDVLKLLDNKVAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRGEFPEV 105
            QKT GSS QPKRASP+S     GAA KK          AGK+TR RL  G++L+VLKLLD K  YAEI RRY  S+S ISLIK  R +LEQ AATNARS TSKSSRRG+FPE+
Sbjct:   60 QKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTYAEIARRYSISTSAISLIKGKRQQLEQAAATNARSTTSKSSRRGDFPEL 172

[Close]

BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Match: A0A6H5KNH6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH6_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 6.910e-29
Identity = 71/113 (62.83%), Postives = 80/113 (70.80%), Query Frame = 0

Query:    1 QKTSGSSNQPKRASPDSGFLRGGAATKKNL--------AGKATRKRLTLGEKLDVLKLLDNKVAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRGEFPEV 105
            QKT GSS QPKRASP+S     GAA KK          AGK+TR RL  G++L+VLKLLD K  YAEI RRY  S+S ISLIK  R +LEQ AATNARS TSKSSRRG+FPE+
Sbjct:   60 QKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTYAEIARRYSISTSAISLIKGKRQQLEQAAATNARSTTSKSSRRGDFPEL 172

[Close]

BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Match: A0A6H5KEK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK9_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 3.050e-28
Identity = 70/113 (61.95%), Postives = 80/113 (70.80%), Query Frame = 0

Query:    1 QKTSGSSNQPKRASPDSGFLRGGAATKKNL--------AGKATRKRLTLGEKLDVLKLLDNKVAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRGEFPEV 105
            QKT GSS QPKRASP+S     GAA KK          AGK+TR RL  G++L+VLKLLD K  +AEI RRY  S+S ISLIK  R +LEQ AATNARS TSKSSRRG+FPE+
Sbjct:   39 QKTPGSSKQPKRASPESELAGDGAAAKKTKPAGKAAGKAGKSTRTRLNFGQQLEVLKLLDEKTTHAEIARRYSISTSAISLIKGKRQQLEQAAATNARSTTSKSSRRGDFPEL 151

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BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Match: A0A6H5JQU7_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU7_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.110e-7
Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 0

Query:   32 GKATRKRLTLGEKLDVLKLLDNKVAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRGEFPEV 105
            G  +R RL   +KL++LKLLD KV++A+I  R+ CS   I  +K  R K+E   AT A   + K++R+G+FPEV
Sbjct:   85 GTGSRARLDNNKKLEILKLLDQKVSHAQIADRFTCSLRFIGTVKAGRQKVE--IATAAGCGSQKAARKGDFPEV 156

[Close]

BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Match: A0A6H5JME0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME0_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.280e-7
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0

Query:   32 GKATRKRLTLGEKLDVLKLLDNKVAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRGEFPEV 105
            G  +R RL   +KL++LK+LD KV++A+I  R+ CS   I  +K  R K+E    T A   + KS+R+G+FPEV
Sbjct:   85 GTGSRARLDNNKKLEILKMLDQKVSHAQIADRFKCSLRLIETVKAGRQKVE--TGTAAGCGSQKSARKGDFPEV 156

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BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Match: A0A6H5KD82_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD82_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.880e-7
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0

Query:   32 GKATRKRLTLGEKLDVLKLLDNKVAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRGEFPEV 105
            G A+R RL   +KLD+LK+LD KV++A+I  R+ CS   I      R K+E   AT A   + K +R+G+FPEV
Sbjct:   85 GTASRARLDSNKKLDILKMLDQKVSHAQIADRFKCSLRFIGTANAGRQKVE--TATAAGCGSQKIARKGDFPEV 156

[Close]

BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Match: A0A6H5JCH9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH9_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 7.080e-7
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0

Query:   44 KLDVLKLLDNKVAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRGEFPEVCSLCF 110
            KL++LKLLD KVA  +   R+GCS      +K DR K+E  AAT A   T K++R+G+FPEV ++  
Sbjct:   96 KLEILKLLDAKVAQVQNAERFGCSERFGRTVKADRKKVE--AATAAGGGTQKTARKGDFPEVDAIAL 160

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BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Match: A0A6H5LPY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPY8_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 9.230e-7
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0

Query:   36 RKRLTLGEKLDVLKLLDNKVAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRGEFPEV 105
            R R+ +  KLD+LKL+D K++YA+I  R+ CS   +  +K DR K+E  AA  A S   K++R+ EF E+
Sbjct:   93 RARVDINGKLDILKLIDAKISYAQIADRFKCSVRFLVTLKSDRKKIEAAAAAGAGSQ--KTARKAEFQEM 160

[Close]

BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Match: A0A6H5J7S2_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7S2_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.360e-6
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 0

Query:   11 KRASPDSGFLRGGAATKKNLAG---KAT--RKRLTLGEKLDVLKLLDNKVAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRGEFPEV 105
            ++A+P  G   G +  +K  +G   K T  R RL   +KL++LK+LD KV++A+I  R+ C    I  +K  R K+E   AT A  ++ K++R+G+FPEV
Sbjct:   59 RKATPAKGAGAGPSKRQKQTSGGCKKGTGFRARLDNNKKLEILKMLDQKVSHAQIADRFKCLLRFIGTVKAGRQKVE--TATAAGCSSQKTARKGDFPEV 156

[Close]

BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Match: A0A6H5KX95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX95_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 4.260e-6
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 0

Query:   36 RKRLTLGEKLDVLKLLDNK-VAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRGEFPEV 105
            R RLTLG+KL++L LLD K ++  EI   Y CS   +S    +R+ LE EAA++ R   SK  R   FPEV
Sbjct:  138 RARLTLGQKLEILDLLDQKKMSRVEIAAIYKCSDRTVSSCSVNRTILEAEAASSTRKLKSKGRRSAGFPEV 208

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot

BLAST of mRNA_H-elongata_contig134341.2437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11


Match Name	E-value	Identity	Description
A0A6H5L4Y6_9PHAE	3.040e-30	62.83	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KNH6_9PHAE	6.910e-29	62.83	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KEK9_9PHAE	3.050e-28	61.95	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JQU7_9PHAE	1.110e-7	44.59	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JME0_9PHAE	1.280e-7	43.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KD82_9PHAE	3.880e-7	44.59	HTH CENPB-type domain-containing protein n=2 Tax=E...	[more]
A0A6H5JCH9_9PHAE	7.080e-7	46.27	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5LPY8_9PHAE	9.230e-7	42.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J7S2_9PHAE	1.360e-6	38.00	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KX95_9PHAE	4.260e-6	46.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 33..83 e-value: 1.3E-5 score: 26.6
IPR007889	DNA binding HTH domain, Psq-type	PFAM	PF04218	CENP-B_N	coord: 35..84 e-value: 5.4E-7 score: 29.1
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 35..84

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig134341	contig	H-elongata_contig134341:1245..1577 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig134341.2437.1	mRNA_H-elongata_contig134341.2437.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig134341 1245..1577 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig134341.2437.1 ID=prot_H-elongata_contig134341.2437.1|Name=mRNA_H-elongata_contig134341.2437.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
QKTSGSSNQPKRASPDSGFLRGGAATKKNLAGKATRKRLTLGEKLDVLKL
LDNKVAYAEIQRRYGCSSSGISLIKKDRSKLEQEAATNARSATSKSSRRG
EFPEVCSLCF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007889	HTH_Psq
IPR009057	Homeobox-like_sf