mRNA_H-elongata_contig1343.2434.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1343.2434.1
Unique NamemRNA_H-elongata_contig1343.2434.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Match: W4FCD2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCD2_9STRA)

HSP 1 Score: 233 bits (594), Expect = 4.040e-65
Identity = 168/551 (30.49%), Postives = 263/551 (47.73%), Query Frame = 1
Query:    1 LTNGQRNAAIAELLRGSSNGTLAKGDFSRVTEMLGCYWKTISRLWKKHEMQRSNGVLSPDIKNGHK-RSGQKSSTQIQSLRDKLMAVPIKNRTMIWRLAVALTIPTTTLHNSLIA-LDLKASRQYLKSLLTDEGKRKQVD*ALRFVREVPGGKFKFNALTNMMCI---LLYLCVHRQK*YLYDEESMPTRKIQHKSHIVKVLFLAAIARLCWDTHSNRPLNGLVGIWPFMEERMAQRNSRNRPAGSMETIWVKVNKESYKRMLVDQVIPRIKEVWPARPNLSMYA--QQDNAPSTQIQALRNKLMAVPIKNRTTIWGLAVALTIPTITLHNNLITLDLKASRQYMKSFFIGEGKRKRVDWDLRFVRE----------------------VPGGKFKFNLLPDMVCIDEKLFYLSIHRQKYSLHDGESMPTRKVPH-------KSHIVKRNSRNRPAGSMETIRMEVNKECYKRILMDQVISKIKEVWPAGPNLTIYAQQSNAPSHRISTDPERLVACRSDGFDIKLINQPPTSPGCNVLDLGFFNAIQSLQ 1545
            L+N  R+A    LL  S NG L+ G       +  C+ KTISR+W +  +   +G  + D+ +  K  SGQK       +   + AVP   R  +  LA    +P TT+   +     LKA   Y K+ LTD     ++  A+ F+   P  +F F+++   +       +L   +++ Y+Y +E +  R ++ K  I KV+FLAA+AR  +D +     +G +G+WPF+E+ +AQRNSRNRP G++      V  E Y+ M++D+   +       R +L  +   ++++    + ++L  +L  VP   RTT+  ++ A+ +P  TLH+            +MK       +  R+ WDL FV +                       PG K           I + +F  ++ R ++ L D      R VP        K+   K  SRNRPAG      + V ++ Y+R+L+D VI  I+  WP+ P  T+  QQ NA  H + T P    ACR DG+ + ++ QPP SP  NVLDLGFF  IQSLQ
Sbjct:   19 LSNASRSAIYETLLASSVNGQLSHGALEHTARIFQCHAKTISRVWARGRLSLRDGRTAADVSSKFKGNSGQKRRRSDDVIEQAVKAVPHFARQTMRSLAAQSGVPKTTIIRHMKNDKTLKAKSNYSKAYLTDANAVHRMQYAMAFLSPSPN-RFIFDSMYQTVHNDEKWFFLTTAKKRVYVYADEEVALRALKSKRFITKVMFLAAVARPRFDHNKGSMFSGKIGVWPFVEQVVAQRNSRNRPKGTVLLAPQAVTAEVYRTMILDKAGTKKNFTDTQRQHLLQHLLKKKNSGRKLKYKSLAEQLRKVPKARRTTLKSISKAMGLPASTLHDYYKRGVFAKYSSHMKPLLTPTNQAARLKWDLDFVHKDNGSLSWTTSWTMFMYMRSGYLAPGEKPPHLSCKSKHFIQKVMFLSAVARPRWILQDSAGSMARSVPGTLPPRNPKTETAKNTSRNRPAGPPVMNPVTVTRDVYRRMLVDNVIPAIRAKWPSAPT-TVKIQQDNAKPHVLVTGPVVEAACRQDGWSMSVVCQPPNSPDVNVLDLGFFREIQSLQ 567          
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 5.470e-44
Identity = 113/328 (34.45%), Postives = 148/328 (45.12%), Query Frame = 1
Query:  589 LFLAAIARLCWDTHSNRPLNGLVGIWPFMEERMAQRNSRNRPAGSMETIWVKVNKESYKRMLVDQVIPRIKEVWPARPNLSMYAQQDNAPSTQIQALRNKLMAVPIKNRTTIWGLAVALTIPTITLHNNLITLDLKASRQYMKSFFIGEGKRKRVDWDLRFVREVPGGKFKFNLLPDMVCIDEKLFYLSIHRQKYSLHDGESMPTRKVPHKSHIVKRNSRNRPAGSMETIRMEVNKECYKRILMDQVISKIKEVWPAGPNLTIYAQQSNAPSHRISTDPERLVACRSDGFDIKLINQPPTSPGCNVLDLGFFNAIQSLQDRTTPKNKD 1572
            +FLAA+AR  +DT       G +GI+PF  +R AQRNSRNR AG+MET  V+V KE +KR +VD+VIP IK  WP                                                                          G+ ++ +    F  ++  G F+F +                                         +RNSRNR AG+MET  +EV KE +KR ++D+V   IK  WP G   TIY Q  N PSHRI+ DP+ + A  +DG+DI+LINQP  SP  N+LDLGFFNA+QSLQDR TP+  D
Sbjct:    1 MFLAAVARPRYDTSRRCNFTGKLGIFPFTVQRPAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVIPAIKARWPG-------------------------------------------------------------------------GRGRKTNRCCNFTGKL--GIFQFTV-------------------------------------QRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVD 216          
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Match: A0A6A4Z848_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z848_9STRA)

HSP 1 Score: 157 bits (396), Expect = 7.160e-39
Identity = 98/291 (33.68%), Postives = 158/291 (54.30%), Query Frame = 1
Query:    1 LTNGQRNAAIAELLRGSSNGTLAKGDFSRVTEMLGCYWKTISRLWKKHEMQRSNGVLSPDIKNGHK-RSGQKSSTQIQSLRDKLMAVPIKNRTMIWRLAVALTIPTTTLHNSL-IALDLKASRQYLKSLLTDEGKRKQVD*ALRFVREVPGGKFKFNALTNMMCI---LLYLCVHRQK*YLYDEESMPTRKIQHKSHIVKVLFLAAIARLCWDTHSNRPLNGLVGIWPFMEERMAQRNSRNRPAGSMETIWVKVNKESYKRMLVDQVIPRIKEVWPARPNLSM-YAQQDNA 855
            L+N +R A    LL  S NG L +G  S   ++  C+ +T+SR+W + +     G +  D+    K  SGQ ++   + +   + AV    R  +  +A    IP TT+   + +   LKA   Y K +LTD+ K +++  AL F+  +  G   F  + N + +     +L   +++ YLY++E +PTR ++ K  I KV+FLAA+AR C+D H     +G +G+WPF++   A+RNS+NRP G+       VN E Y++M+VD V+P IK   P +   ++ Y QQDNA
Sbjct:   19 LSNDERAAVYHALLSRSMNGKLPRGALSATAQLFQCHLRTVSRVWTRAQSSLRAGAMLADVSMKFKGNSGQVATRSPKDIELAIKAVSHNGRQTLRDMAAQSGIPKTTIVRHMKVNPKLKAMSSYSKPMLTDDNKVQRMKHALSFIPTLSKGTI-FGNMNNFVHVDEKWFFLTTVKKRYYLYEDEVLPTRFLKSKRFITKVMFLAAVARPCYDHHKKCHFDGKIGVWPFVKPVEAKRNSKNRPKGTPLLAPESVNAEVYRKMIVDNVVPAIKAKMPRQSQANIIYLQQDNA 308          
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Match: A0A6A4ZZC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZZC0_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.010e-36
Identity = 102/299 (34.11%), Postives = 159/299 (53.18%), Query Frame = 1
Query:    1 LTNGQRNAAIAELLRGSSNGTLAKGDFSRVTEMLGCYWKTISRLWKK-HEMQRSNGVLSPDIKNGHKRSGQKSSTQIQSLRDKLMAVPIKNRTMIWRLAVALTIPTTTLHNSLIALDLKASRQYLKSLLT-----DEGKRKQVD*ALRFVREVPGGKFKFNALTNMMCI--LLYLCVHRQK*YLYDEESMPTRKIQHKSHIVKVLFLAAIARLCWDTHSNRPLNGLVGIWPFMEERMAQRNSRNRPAGSMETIWVKVNKESYKRMLVDQVIPRIKEVWPARPNLSMYAQQDNA-PSTQI 870
            + N QR +   ELL+   NG L  G    + +  G   +T+S++WK   E +   G+ +  IK    R G+     I+ L   + AVP   R  +  LAV+  I  TTL   L +  L+    +LK ++T     D+ K  +V  A  F+R+   G    + +  +       Y+ + +++ YL+ +E +P RK   K HI+KV+FL A+AR  +D  S    +G +G+WPF+ E  AQR S+NRP G+M T  + V K  Y+  LV++V+ RIK+VWP R ++ +Y QQDNA P  Q+
Sbjct:   10 IPNDQRLSLYHELLQHKENGRLPYGKGKELMQQYGLSKQTLSKIWKAGQESKARTGLANVAIKKKG-RCGRPRRRSIKDLEVAIKAVPAHLRLTLRSLAVSSGIAPTTLWRLLQSKKLRRRTSHLKPMVTEPMVTDKHKADRVVFARSFLRQCRDGMMWHDMMDRVHIDEKWFYVTMVKRRYYLWHDEDLPVRKCSSKRHIIKVMFLTAVARPRYDHGSKTMWDGKIGMWPFVSEVPAQRTSKNRPRGTMVTAPITVTKSVYRDFLVNKVVRRIKQVWPGRRDVPVYIQQDNARPHVQV 307          
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Match: W4G1W8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1W8_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.360e-36
Identity = 96/288 (33.33%), Postives = 149/288 (51.74%), Query Frame = 1
Query:    1 LTNGQRNAAIAELLRGSSNGTLAKGDFSRVTEMLGCYWKTISRLWKKHEMQRSNGVLSPDIKNGHKRSGQKSSTQIQSLRDKLMAVPIKNRTMIWRLAVALTIPTTTLHNSLIALDLKASRQYLKSLLTDEGKRKQVD*ALRFVREVPGGKFKFNALTNMMCI---LLYLCVHRQK*YLYDEESMPTRKIQHKSHIVKVLFLAAIARLCWDTHSNRPLNGLVGIWPFMEERMAQRNSRNRPAGSMETIWVKVNKESYKRMLVDQVIPRIKEVWPARPNLSMYAQQDNA 855
            L + QR +   +LL    +G LA+G  S +    G   +T+S++WK+ +  RS G  +        R+G+     +  +   + +VP   R     LA +  IP TTL   L    L+     LK ++TD+ K  +VD    FVR    G  +++ + + + I     YL +  ++ Y + +E++P RK   K HI+KV+FL A+AR  +D +     +G +G+WPF+    AQR S+NR  G+  T  V V K  Y+  L+  VIP IKEVWP R +  +Y QQDNA
Sbjct:   10 LPDDQRWSLYHDLLENKQSGRLARGKASELLLKYGISRQTLSKVWKRGQETRSQGGRADVALKRKSRTGRWPKRTMHEVEAAVKSVPPHLRKTFASLAASSGIPPTTLWRVLQTRKLQRRTSRLKPMVTDKHKADRVDFVRSFVRSTGSGPMRWDDMHDRVHIDEKWFYLTLVNRRYYQWHDEAVPIRKCSSKRHIIKVMFLTAVARPRYDYNPRTMWDGKIGMWPFVSVVPAQRKSKNRDRGTAVTTPVTVTKPVYREYLLKHVIPTIKEVWPGRRSEPIYNQQDNA 297          
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.320e-35
Identity = 97/273 (35.53%), Postives = 145/273 (53.11%), Query Frame = 1
Query:   49 SSNGTLAKGDFSRVTEMLGCYWKTISRLWKKHEMQRSNGVLSPDIKNGHKR-SGQKSSTQIQSLRDKLMAVPIKNRTMIWRLAVALTIPTTTLHNSLIALDLKASRQYLKSLLTDEGKRKQVD*ALRFVREVPGGKFKFNALTNMMCI---LLYLCVHRQK*YLYDEESMPTRKIQHKSHIVKVLFLAAIARLCWDTHSNRPLNGLVGIWPFMEERMAQRNSRNRPAGSMETIWVKVNKESYKRMLVDQVIPRIKEVWPARPNLSMYAQQDNA 855
            S +G L  G F R+ +   C W TISR+WK+      +  L  DI +  K  SG+K   +   L  ++ A+P  +RT + R+A  + +P T+LH       L     +LK LLTD  K  ++  A +FV    G    F+ + + + I     Y+   ++  YL   E  P R  Q K  I KV+FL+A+AR  W+ + +   +G +G W F E   AQRNSRNRP+G++ T+ V V++++Y+ MLV+ VIP IK  WP      +  QQDNA
Sbjct:   25 SRDGKLPHGSFKRLAQRFNCSWLTISRIWKRANFCPESNTLLQDIGSRIKAASGRKK--KYTDLAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFV----GPDLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWPDARTSCIVIQQDNA 291          
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.590e-35
Identity = 95/288 (32.99%), Postives = 152/288 (52.78%), Query Frame = 1
Query:    1 LTNGQRNAAIAELLRGSSNGTLAKGDFSRVTEMLGCYWKTISRLWKKHEMQRSNGVLSPDIKNGHKRSGQKSSTQIQSLRDKLMAVPIKNRTMIWRLAVALTIPTTTLHNSLIALDLKASRQYLKSLLTDEGKRKQVD*ALRFVREVPGGKFKFNALTNMMCI---LLYLCVHRQK*YLYDEESMPTRKIQHKSHIVKVLFLAAIARLCWDTHSNRPLNGLVGIWPFMEERMAQRNSRNRPAGSMETIWVKVNKESYKRMLVDQVIPRIKEVWPARPNLSMYAQQDNA 855
            L N QR +   +LL    NG LA+G  + + +  G   +T+S++ K+ +  R+    +        RSG+     +  +   + +VP   R     LA +  IP+TTL   L    L+     LK ++TD+ K  +V+    FVR    G+ +++ + + + I     YL +  ++ YL+ +E +P RK   K HI+KV+FL A+AR  +D    R  +G +G+WPF+    AQR S+NR  G+  T  V V K+ Y+  L++ VIP IK+VWP R +  +Y QQDNA
Sbjct:   10 LPNDQRWSLYHDLLENKRNGRLARGKAAELLQKYGISRQTLSKVRKRGQHSRAVFGRADVAAMKKGRSGRPPKRTVDDVEAAVKSVPPHLRKTFVMLAASSGIPSTTLWRVLQTKKLQRRTSRLKPMVTDKHKADRVEFVQAFVRPSTNGQMRWDDMLDRVHIDEKWFYLTLVNRRYYLWHDEDVPVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNA 297          
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Match: A0A6A4Z1S9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z1S9_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.930e-35
Identity = 94/288 (32.64%), Postives = 151/288 (52.43%), Query Frame = 1
Query:    1 LTNGQRNAAIAELLRGSSNGTLAKGDFSRVTEMLGCYWKTISRLWKKHEMQRSNGVLSPDIKNGHKRSGQKSSTQIQSLRDKLMAVPIKNRTMIWRLAVALTIPTTTLHNSLIALDLKASRQYLKSLLTDEGKRKQVD*ALRFVREVPGGKFKFNALTNMMCI---LLYLCVHRQK*YLYDEESMPTRKIQHKSHIVKVLFLAAIARLCWDTHSNRPLNGLVGIWPFMEERMAQRNSRNRPAGSMETIWVKVNKESYKRMLVDQVIPRIKEVWPARPNLSMYAQQDNA 855
            L + QR +   +LL    +G LA+G  + + +  G   +T+S++WK+ +  R     +        RSG++    +  +   + +VP   R     LA +  IP TTL   L    L+     LK ++TD+ K  +V+    FVR    G+ +++ + N + I     YL +  ++ YL+ +E++P RK   K HI+KV+FL A+AR  +D  +    +G +G+WPF+    A+R S+NR  G+  T  V V K  Y+  L+  VIPRIK VWP R +  +Y QQDNA
Sbjct:   10 LPDDQRWSLYHDLLESKHSGRLARGVAAELLKKYGISRQTLSKIWKRGQQTRVQSGRADVGLRKKGRSGRRPKRTLDEVESAVKSVPPHLRKTFASLAASSGIPPTTLWRVLQTKKLQRRTSRLKPMVTDKHKADRVEFVRSFVRPTSDGQMRWDDMHNRVHIDEKWFYLTLVNRRYYLWHDEAVPVRKCTSKRHIIKVMFLTAVARPRFDYTTRTMWDGKIGMWPFVSVVPARRKSKNRDRGTPVTTPVTVTKPVYRDYLLTHVIPRIKAVWPGRRSDPIYIQQDNA 297          
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 8.750e-35
Identity = 84/206 (40.78%), Postives = 111/206 (53.88%), Query Frame = 1
Query: 1051 VDWDLRFVREVPGGKFKFNLLPDMVCIDEKLFYLSIHRQKYSLHDGESMPTRKVPHKSHIVK------------------------------------RNSRNRPAGSMETIRMEVNKECYKRILMDQVISKIKEVWPAGPNLTIYAQQSNAPSHRISTDPERLVACRSDGFDIKLINQPPTSPGCNVLDLGFFNAIQSLQDRTTP 1560
            + W LR+VR   G   KF+   D + +DEK FY+    Q+Y  ++GE +P RKV HKSH++K                                    RN RN  AG+M T  +EVN+  YK+ L + V   I+  +P+ P   I+AQQ NAP HR   DP+ + A       I+L+NQPP SP CN+LDLGFFN+IQSLQDRTTP
Sbjct:   34 LSWALRWVRPSAGDAHKFHHFFDFLHLDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYKK-LNNNVFPDIRAKFPSSP--IIFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPNSPDCNILDLGFFNSIQSLQDRTTP 236          
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Match: A0A6A5A8N9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A8N9_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.050e-34
Identity = 91/294 (30.95%), Postives = 151/294 (51.36%), Query Frame = 1
Query:    1 LTNGQRNAAIAELLRGSSNGTLAKGDFSRVTEMLGCYWKTISRLWKKHEMQRSNGVLSPDIKNGHKRSGQKSSTQIQSLRDKLMAVPIKNRTMIWRLAVALTIPTTTLHNSLIALDLKASRQYLKSLLTDEGKRKQVD*ALRFVREVPGGKFKFNALTNMMCI---LLYLCVHRQK*YLYDEESMPTRKIQHKSHIVKVLFLAAIARLCWDTHSNRPLNGLVGIWPFMEERMAQRNSRNRPAGSMETIWVKVNKESYKRMLVDQVIPRIKEVWPARPNLSMYAQQDNA-PSTQI 870
            L + +R     ELL    NG L  G  + + +  G   +T+S++W++ +  +    L+   +     SG+     +Q +   + +     R  +  L+ A  IP TTL   L    L+     +K ++TD+ K  +V  A  FVR    G+ +++ + + + I     Y+ +  ++ YL+ +E +P R+   K HI+KV+FL A+AR  +D       +G +G WPF+    A+R S+NR  G+M T  + V K  Y++ LVD VIP IK +WP R NL ++ QQDNA P  Q+
Sbjct:   10 LPDDERLKLYHELLETKVNGRLPHGHLNVLLDRYGISRQTLSKVWQRGQRSKEQTGLACVARRKKGHSGRPRKRSVQQIEAAIKSAAPHLRMTLATLSTATGIPPTTLWRLLQTKKLRRRISRIKPMMTDKHKTDRVSFARSFVRSTASGQLRWHDMMDRVHIDEKWFYVTLINRRYYLWHDEDVPIRRCTSKRHIIKVMFLTAVARPRYDAGKKEMWDGKIGTWPFVSMVAAKRKSKNRERGTMVTTPLTVTKPIYRQFLVDNVIPSIKRLWPGRRNLPIFIQQDNARPHVQV 303          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1343.2434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4FCD2_9STRA4.040e-6530.49Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6H5JGY9_9PHAE5.470e-4434.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A4Z848_9STRA7.160e-3933.68Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4ZZC0_9STRA1.010e-3634.11Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4G1W8_9STRA1.360e-3633.33Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485KBU5_9STRA2.320e-3535.53Aste57867_2438 protein n=2 Tax=Aphanomyces stellat... [more]
A0A485KDC6_9STRA2.590e-3532.99Aste57867_3131 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6A4Z1S9_9STRA3.930e-3532.64Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6H5KWV2_9PHAE8.750e-3540.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A5A8N9_9STRA1.050e-3430.95Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1343contigH-elongata_contig1343:2713..4647 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score135.2
Seed ortholog evalue5.8e-29
Seed eggNOG ortholog161934.XP_010666523.1
EggNOG OGs2CMKC@1,2QQNW@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size1575
Cds size1032
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1343.2434.1prot_H-elongata_contig1343.2434.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1343 3256..4647 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929797.9397707-UTR-H-elongata_contig1343:2712..32551622929797.9397707-UTR-H-elongata_contig1343:2712..3255Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1343 2713..3255 +
1691679161.4816918-UTR-H-elongata_contig1343:2712..32551691679161.4816918-UTR-H-elongata_contig1343:2712..3255Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1343 2713..3255 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929797.9600446-CDS-H-elongata_contig1343:3255..35691622929797.9600446-CDS-H-elongata_contig1343:3255..3569Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1343 3256..3569 +
1691679161.4936922-CDS-H-elongata_contig1343:3255..35691691679161.4936922-CDS-H-elongata_contig1343:3255..3569Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1343 3256..3569 +
1622929797.9705534-CDS-H-elongata_contig1343:3821..42001622929797.9705534-CDS-H-elongata_contig1343:3821..4200Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1343 3822..4200 +
1691679161.5039535-CDS-H-elongata_contig1343:3821..42001691679161.5039535-CDS-H-elongata_contig1343:3821..4200Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1343 3822..4200 +
1622929797.9862547-CDS-H-elongata_contig1343:4308..46471622929797.9862547-CDS-H-elongata_contig1343:4308..4647Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1343 4309..4647 +
1691679161.5112092-CDS-H-elongata_contig1343:4308..46471691679161.5112092-CDS-H-elongata_contig1343:4308..4647Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1343 4309..4647 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1343.2434.1

>prot_H-elongata_contig1343.2434.1 ID=prot_H-elongata_contig1343.2434.1|Name=mRNA_H-elongata_contig1343.2434.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=344bp
MPTRKIQHKSHIVKVLFLAAIARLCWDTHSNRPLNGLVGIWPFMEERMAQ
RNSRNRPAGSMETIWVKVNKESYKRMLVDQVIPRIKEVWPARPNLSMYAQ
QDNAPSTQIQALRNKLMAVPIKNRTTIWGLAVALTIPTITLHNNLITLDL
KASRQYMKSFFIGEGKRKRVDWDLRFVREVPGGKFKFNLLPDMVCIDEKL
FYLSIHRQKYSLHDGESMPTRKVPHKSHIVKRNSRNRPAGSMETIRMEVN
KECYKRILMDQVISKIKEVWPAGPNLTIYAQQSNAPSHRISTDPERLVAC
RSDGFDIKLINQPPTSPGCNVLDLGFFNAIQSLQDRTTPKNKD*
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mRNA from alignment at H-elongata_contig1343:2713..4647+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1343.2434.1 ID=mRNA_H-elongata_contig1343.2434.1|Name=mRNA_H-elongata_contig1343.2434.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1935bp|location=Sequence derived from alignment at H-elongata_contig1343:2713..4647+ (Himanthalia elongata Himel1 dioecious)
CTAACCAATGGTCAGCGAAATGCTGCAATCGCAGAGCTTCTCCGAGGCAG CAGCAACGGCACACTCGCGAAGGGTGACTTCTCTCGGGTGACAGAGATGT TAGGCTGCTACTGGAAGACTATTTCACGCCTGTGGAAGAAGCATGAGATG CAGAGGAGCAATGGCGTGCTCTCGCCAGACATAAAGAACGGTCACAAACG AAGTGGCCAGAAGAGCAGCACCCAGATCCAATCCCTTCGGGATAAGCTGA TGGCAGTCCCGATCAAGAACCGCACAATGATCTGGAGGCTCGCGGTTGCG CTGACCATCCCGACAACTACCCTGCACAACAGCCTGATCGCGCTCGACCT CAAAGCTTCCAGGCAATACTTGAAGTCGCTTCTTACTGACGAAGGCAAGC GGAAGCAAGTGGATTGAGCTTTGCGCTTTGTCCGTGAGGTGCCTGGGGGT AAGTTCAAGTTTAACGCCCTAACCAACATGATGTGCATCTTGCTCTACCT GTGCGTTCACAGGCAGAAATAATACCTGTACGACGAAGAGTCTATGCCCA CCCGCAAGATACAGCACAAGTCTCATATAGTCAAGGTATTGTTCCTTGCT GCTATCGCCCGGCTTTGCTGGGACACTCACAGCAATAGGCCGTTGAACGG TCTGGTCGGTATCTGGCCGTTCATGGAAGAGCGCATGGCTCAGCGCAACA GCAGAAACAGGCCGGCGGGTAGTATGGAGACCATCTGGGTGAAGGTCAAC AAGGAAAGTTACAAGCGGATGCTCGTGGACCAAGTTATCCCCAGGATCAA AGAGGTGTGGCCTGCAAGGCCAAACCTATCCATGTATGCCCAGCAGGACA ACGCCCCGTCCCACCGTATCAAACAAAGCACAAAAATAACCTAACAAATG ATCAGCGAAATGCTGCAATCGCAGAGCGTTTGCGAGGCAGTTGCAACATC ACACTCGCGAAGGTTAACTTATCTCGAGTGGCAGATATATTTGGCTGCTA CTGGAAGACTATTTCACGCATGCCTGTGGAAGAGGCATGAGACGCAGAGG AGCAATGGCGTGCTCTCGCCAGACATGAAGAACGGCCACAAATGAAGTGG ATGGGAGAGCAGCACCCAAATCCAGGCCCTTCGGAATAAGCTAATGGCAG TCCCGATCAAGAACCGCACAACGATCTGGGGGCTCGCGGTTGCGCTGACC ATCCCAACCATTACCCTGCACAACAACCTGATCACGCTCGACCTCAAAGC TTCCAGGCAATACATGAAGTCATTTTTTATTGGCGAAGGCAAGCGGAAGC GAGTGGATTGGGATTTGCGCTTTGTCCGTGAGGTGCCTGGGGGTAAGTTC AAGTTTAACCTCCTCCCCGACATGGTGTGCATCGATGAAAAGTTGTTCTA CTTAAGCATTCACCGGCAGAAATACTCCCTGCACGACGGAGAGTCTATGC CCACCCGCAAGGTACCGCACAAGTCTCATATAGTTAAGGTATTGTTATTT GCTGTTGTCGCCCGGCCTCGGTGAGACACTCACAATAATAGGCCGTTCAA CGGTCTGATCGGTATCTGGTCGTTCATGAAACAGCACATGGTTCAGCGCA ACAGCAGAAACAGGCCGGCGGGTAGTATGGAGACCATCAGGATGGAGGTC AACAAGGAATGCTACAAGCGGATACTCATGGACCAAGTTATCTCCAAGAT CAAAGAGGTGTGGCCTGCAGGGCCAAACCTAACCATTTATGCCCAGCAGA GTAACGCCCCGTCCCACCGCATCAGCACGGATCCGGAGCGATTGGTGGCA TGCCGGTCAGACGGTTTCGACATCAAGCTCATCAACCAGCCACCGACCAG CCCTGGCTGCAACGTCCTCGACCTGGGATTCTTCAATGCGATACAGTCCC TTCAGGACCGCACTACCCCCAAGAATAAAGATTAA
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Coding sequence (CDS) from alignment at H-elongata_contig1343:2713..4647+

>mRNA_H-elongata_contig1343.2434.1 ID=mRNA_H-elongata_contig1343.2434.1|Name=mRNA_H-elongata_contig1343.2434.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2064bp|location=Sequence derived from alignment at H-elongata_contig1343:2713..4647+ (Himanthalia elongata Himel1 dioecious)
ATGCCCACCCGCAAGATACAGCACAAGTCTCATATAGTCAAGGTATTGTT
CCTTGCTGCTATCGCCCGGCTTTGCTGGGACACTCACAGCAATAGGCCGT
TGAACGGTCTGGTCGGTATCTGGCCGTTCATGGAAGAGCGCATGGCTCAG
CGCAACAGCAGAAACAGGCCGGCGGGTAGTATGGAGACCATCTGGGTGAA
GGTCAACAAGGAAAGTTACAAGCGGATGCTCGTGGACCAAGTTATCCCCA
GGATCAAAGAGGTGTGGCCTGCAAGGCCAAACCTATCCATGTATGCCCAG
CAGGACAACGCCCCATGCCCACCCGCAAGATACAGCACAAGTCTCATATA
GTCAAGGTATTGTTCCTTGCTGCTATCGCCCGGCTTTGCTGGGACACTCA
CAGCAATAGGCCGTTGAACGGTCTGGTCGGTATCTGGCCGTTCATGGAAG
AGCGCATGGCTCAGCGCAACAGCAGAAACAGGCCGGCGGGTAGTATGGAG
ACCATCTGGGTGAAGGTCAACAAGGAAAGTTACAAGCGGATGCTCGTGGA
CCAAGTTATCCCCAGGATCAAAGAGGTGTGGCCTGCAAGGCCAAACCTAT
CCATGTATGCCCAGCAGGACAACGCCCCCAGCACCCAAATCCAGGCCCTT
CGGAATAAGCTAATGGCAGTCCCGATCAAGAACCGCACAACGATCTGGGG
GCTCGCGGTTGCGCTGACCATCCCAACCATTACCCTGCACAACAACCTGA
TCACGCTCGACCTCAAAGCTTCCAGGCAATACATGAAGTCATTTTTTATT
GGCGAAGGCAAGCGGAAGCGAGTGGATTGGGATTTGCGCTTTGTCCGTGA
GGTGCCTGGGGGTAAGTTCAAGTTTAACCTCCTCCCCGACATGGTGTGCA
TCGATGAAAAGTTGTTCTACTTAAGCATTCACCGGCAGAAATACTCCCTG
CACGACGGAGAGTCTATGCCCACCCGCAAGGTACCGCACAAGTCTCATAT
AGTTAAGCAGCACCCAAATCCAGGCCCTTCGGAATAAGCTAATGGCAGTC
CCGATCAAGAACCGCACAACGATCTGGGGGCTCGCGGTTGCGCTGACCAT
CCCAACCATTACCCTGCACAACAACCTGATCACGCTCGACCTCAAAGCTT
CCAGGCAATACATGAAGTCATTTTTTATTGGCGAAGGCAAGCGGAAGCGA
GTGGATTGGGATTTGCGCTTTGTCCGTGAGGTGCCTGGGGGTAAGTTCAA
GTTTAACCTCCTCCCCGACATGGTGTGCATCGATGAAAAGTTGTTCTACT
TAAGCATTCACCGGCAGAAATACTCCCTGCACGACGGAGAGTCTATGCCC
ACCCGCAAGGTACCGCACAAGTCTCATATAGTTAAGCGCAACAGCAGAAA
CAGGCCGGCGGGTAGTATGGAGACCATCAGGATGGAGGTCAACAAGGAAT
GCTACAAGCGGATACTCATGGACCAAGTTATCTCCAAGATCAAAGAGGTG
TGGCCTGCAGGGCCAAACCTAACCATTTATGCCCAGCAGAGTAACGCCCC
GTCCCACCGCATCAGCACGGATCCGGAGCGATTGGTGGCATGCCGGTCAG
ACGGTTTCGACATCAAGCTCATCAACCAGCCACCGACCAGCCCTGGCTGC
AACGTCCTCGACCTGGGATTCTTCAATGCGATACAGTCCCTTCAGGACCG
CACTACCCCCAAGAATAAAGATTAACGCAACAGCAGAAACAGGCCGGCGG
GTAGTATGGAGACCATCAGGATGGAGGTCAACAAGGAATGCTACAAGCGG
ATACTCATGGACCAAGTTATCTCCAAGATCAAAGAGGTGTGGCCTGCAGG
GCCAAACCTAACCATTTATGCCCAGCAGAGTAACGCCCCGTCCCACCGCA
TCAGCACGGATCCGGAGCGATTGGTGGCATGCCGGTCAGACGGTTTCGAC
ATCAAGCTCATCAACCAGCCACCGACCAGCCCTGGCTGCAACGTCCTCGA
CCTGGGATTCTTCAATGCGATACAGTCCCTTCAGGACCGCACTACCCCCA
AGAATAAAGATTAA
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