prot_H-elongata_contig1338.2398.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig1338.2398.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE) HSP 1 Score: 104 bits (259), Expect = 6.100e-21 Identity = 66/199 (33.17%), Postives = 89/199 (44.72%), Query Frame = 0
Query: 1 MRLPRNAQCETMDRFDAFNKLRADWGVVAEWEFSHGRTPHGLVERLIASCHSIGNVERNTCWRRGACFVAHETAIALAGGSFALSLQFTQSSTSNLRTSGTLVVKAFGNRDCRAVWGALRFVISTVWSLFQEFPGLSWQARVMCPKHEGRIMHYLSGVKDIKGRAPGTPIVQPGAIRHCGCQQEVARRLRTVLPPSSPL 199
MRL FD V +WEF P+GL+ERLIASCH +G VE CWR GA F +H+ + G + S TS + K FG D VW A+R+V S + +L +E+PG+ W + C KH + ++ S V+ G P P P A R C C E LR + P+
Sbjct: 487 MRLSETCNEHQRTLFDGLASKMPRDRVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHD--MRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVGD-PLLPAAAPDA-RRCDCLLEPGGVLRLAVEELGPV 681
BLAST of mRNA_H-elongata_contig1338.2398.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 5.250e-12 Identity = 60/200 (30.00%), Postives = 88/200 (44.00%), Query Frame = 0
Query: 1 MRLP----RNAQCETMDRFDAFNKLRADWGVVAEWEFSHGRTPHGLVERLIASCHSIGNVERNTCWRRGACFVAHETAIALAGGS---FALSLQFTQSSTSNLRTSGTLVVKAFGNRDCRAVWGALRFVISTVWSLFQEFPGLSWQARVMCPKHEGRIMHYLSGVKDIKGRAPGTPIVQPGAIRHCGCQQEVARRLRTVL 193
MRLP N Q E + ++ V +W F HGLVER+IASCH +G+V CWR GA F ++ A A GG ++ +++ + S R L V FG +W ALR+V S+V + +PG+ W+ C H M++ + ++ G T A C C +R VL
Sbjct: 793 MRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSY--ARADDGGLNWLYSFVIRYDEEVGSGERV---LAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKTPIEARIGDPILTDPDPRTAPNVCDCYTTEGNAMRLVL 987 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1338.2398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig1338.2398.1 ID=prot_H-elongata_contig1338.2398.1|Name=mRNA_H-elongata_contig1338.2398.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=334bpback to top |