mRNA_H-elongata_contig133481.2377.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN) HSP 1 Score: 360 bits (925), Expect = 9.780e-109 Identity = 182/387 (47.03%), Postives = 255/387 (65.89%), Query Frame = 1
Query: 1 MENLFEEATVKAVIKKANQQTAAGPSGLRDSHLQAALCNELVEDLAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALVE 1161
+E F TV A I++ N Q + GPSGLR S LQ++L EL E +A +++F LP FW LHTSANLSA+G K RP+A GD+ RR++G V CR+YG A++F+P+GQYGVAV GG E +A A L + G +L+YD +N FNS+ R LPALA+++P M+PYA+N+YAREP KLL+ D G + V+ S GVQQGCNLGP CYSAG LK+LR+FRANPPV GA+ ++FIDD+ V+LP + + AA VT W+Q + ++LN+ KS+ L G + E+ R ++ T L V MR+VGVPVG + + GEP +L++ + S+++AQ S QIL S +RL++LLR++PP + + A+ +D VE
Sbjct: 1154 VEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVE 1539
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE) HSP 1 Score: 329 bits (843), Expect = 4.530e-104 Identity = 180/384 (46.88%), Postives = 241/384 (62.76%), Query Frame = 1
Query: 13 FEEATVKAVIKKANQQTAAGPSGLRDSHLQAA-LCNELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
FE +K +KKAN Q+A GP GLR S+LQA + + E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FC +Y A+ F+ Q+G V GGVE +A TA L + G TILS+D +N +NS+ R LPA+A P +V Y N+YAR KLLF ++ GS+EVV S +GVQQGCNLG F + G L I++EF PPV GA+ + ++DD+ V LPP L+ ++ AI VT W+Q L + I L+ KS+ L G+ LT ++ ++ TGL+V M +VGVPVGTE FQR F+ G PAEL+R L ++++ Q S+Q+L LS RL +LLRT+ PSI A +D L+
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLM 503
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE) HSP 1 Score: 334 bits (857), Expect = 9.220e-104 Identity = 179/384 (46.61%), Postives = 244/384 (63.54%), Query Frame = 1
Query: 13 FEEATVKAVIKKANQQTAAGPSGLRDSHLQAA-LCNELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
FE +K +KKAN Q+A GP GLR S+LQA + + E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y A+ F+ Q+G V GGVE +A TA L + G TILS+D +N +NS+ R LPA+A P +V Y N+YAR KLLF ++ GS+EVV S +GVQQGCNLG F + G L I++EF PPV G + + ++DD+ LPP L+ +M AI VT W+Q+RL + I L+ KS+ L G+ LT ++ ++ GL+V M VVG+PVGTE+FQR+F+ K G+PAEL+ L ++++ Q S+Q+L LS RL +LLRT+ PSI A +D ++
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMM 503
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE) HSP 1 Score: 335 bits (860), Expect = 2.550e-102 Identity = 179/384 (46.61%), Postives = 244/384 (63.54%), Query Frame = 1
Query: 13 FEEATVKAVIKKANQQTAAGPSGLRDSHLQAA-LCNELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
FE +K +KKAN Q+A GP GLR S+LQA + + E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y A+ F+ Q+G V GGVE +A TA L + G TILS+D +N +NS+ R LPA+A P +V Y N+YAR KLLF ++ GS+EVV S +GVQQGCNLG F + G L I++EF PPV G + + ++DD+ LPP L+ +M AI VT W+Q+RL + I L+ KS+ L G+ LT ++ ++ GL+V M VVG+PVGTE+FQR+F+ K G+PAEL+ L ++++ Q S+Q+L LS RL +LLRT+ PSI A +D ++
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMM 503
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE) HSP 1 Score: 297 bits (761), Expect = 2.870e-93 Identity = 160/345 (46.38%), Postives = 216/345 (62.61%), Query Frame = 1
Query: 127 EDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y A+ F+ Q+G V GGVE +A TA L + G TILS+D +N +NS+ R LPA+A P + Y N+YAR KLLF ++ GS+EVV S +GVQQGCNLG F + G L I++EF PPV GA+ + ++DD+ V LPP L+ ++ AI VT W+Q L + I L+ KS L G+ LT ++ ++ TGL+V M +VGVPVGTE FQR F+ G PAEL+ L ++++ Q S+Q+L +S RL +LLRT+ PSI A +D+L+
Sbjct: 7 ETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLM 351
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE) HSP 1 Score: 302 bits (774), Expect = 1.800e-89 Identity = 159/351 (45.30%), Postives = 221/351 (62.96%), Query Frame = 1
Query: 109 LCNELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
+ + E LA F+ VF LP W LHTSANLSALG+K RP+A G VLRR+I F R+Y A+ F+ Q+G V GGVE +A TA L + G TILS+D +N +NS+ R LPA+A + P +V Y N+YAR KLLF ++ GS+EVV S +GVQQGCNLG F + G L I++EF PPV G + + ++DD+ LPP L+ +M AI VT W+Q+RL + I L+ KS+ L G+ LT ++ ++ GL+V M VVG+PVGTE+FQR+F+ K G+PAEL+ L ++++ Q S+Q+L LS RL +LLRT+ PSI A +D ++
Sbjct: 1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMM 351
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE) HSP 1 Score: 254 bits (649), Expect = 8.630e-78 Identity = 136/278 (48.92%), Postives = 178/278 (64.03%), Query Frame = 1
Query: 13 FEEATVKAVIKKANQQTAAGPSGLRDSHLQAA-LCNELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQAL 840
FE +K +KKAN Q+A GP GLR S+LQA + + E LA F+ VF LP FW LHTSANLSALG+K RP+A G VLRR+I FCR+Y A+ F+ Q+G V GGVE +A TA L + G TILS+D +N +NS+ R LPA+A P +V Y N+YAR KLLF ++ GS+EVV S +GVQQGCNLG F + G L I++EF PPV G + + ++DD+ LPP L+ +M AI VT W+Q+RL + I L+ KS+ L
Sbjct: 120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVL 397
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE) HSP 1 Score: 172 bits (435), Expect = 2.330e-47 Identity = 89/202 (44.06%), Postives = 127/202 (62.87%), Query Frame = 1
Query: 553 LDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
++ GS+E+V S +GVQQGCNLG F +S G L ++EF PPV GA+ + ++DD+ V LPP L+ ++ AI VT W+Q L + I L+ KS+ L G LT ++ ++ TGL+V M +VGVPVGTE FQR F+ G PAEL+R L ++++ Q S+Q+L LS RL +LLRT+ PSI A +D L+
Sbjct: 1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLM 202
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.470e-44 Identity = 126/393 (32.06%), Postives = 196/393 (49.87%), Query Frame = 1
Query: 4 ENLFEEATVKAVIKKANQQTAAGPSGLRDSHLQAALCNELV-EDLAA-----FATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAE-LVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALVE 1161
E F+ + VI + + AG G R SHL++ ++ ED + LV P FWTL ++L ALG+K RPV G RR+I A R++ K + F+ Q+GVAV+GGVE +A+ A L + G I+ D N FN+ R + A+ +P +V Y + Y P ++ +D G +E GVQQG +GP +S + I+ + + G +++DDIT+ L L ++ +T+ L L I +N+ KS AL G +T+QQR ++ GLTV + + VVGVP+GT+ + R+F K + AE L R L M + QV+ I SLS R +Y+ R + P++ + D +V+
Sbjct: 535 EEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLK---DLTEESVQAMTD-LVDELAEVGIVVNRAKSSALPPPG---HMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQ 920
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE) HSP 1 Score: 161 bits (407), Expect = 2.700e-40 Identity = 114/367 (31.06%), Postives = 180/367 (49.05%), Query Frame = 1
Query: 37 VIKKANQQTAAGPSGLRDSHLQAALCNELVED------LAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGP--FCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVN-GEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTV 1110
VI + + AG G R SHL++ + ++ + + + L+ P FWTL ++L ALG+K RPV G RR+I A R + K + F+ Q+GVAV+GGVE +A+ A L + G ++ D N FN+ R + A+ VP +V Y + Y P K ++ +D G +E GVQQG +GP FC++ + I+ + RA G R +++DDI + ++ + +V L L I +N+ KS AL G +T +R + GL + + + VVGVP+GT+ + D K + G +L R LV M + QV+ + S S T R Y+ R +
Sbjct: 7 VINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTL--VPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENI---QVIPDLVDELEAVGIIVNRGKSSALPPPG---HDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGI 365 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig133481.2377.1 >prot_H-elongata_contig133481.2377.1 ID=prot_H-elongata_contig133481.2377.1|Name=mRNA_H-elongata_contig133481.2377.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=387bp MENLFEEATVKAVIKKANQQTAAGPSGLRDSHLQAALCNELVEDLAAFATback to top mRNA from alignment at H-elongata_contig133481:474..1634- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig133481.2377.1 ID=mRNA_H-elongata_contig133481.2377.1|Name=mRNA_H-elongata_contig133481.2377.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1161bp|location=Sequence derived from alignment at H-elongata_contig133481:474..1634- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig133481:474..1634- >mRNA_H-elongata_contig133481.2377.1 ID=mRNA_H-elongata_contig133481.2377.1|Name=mRNA_H-elongata_contig133481.2377.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2322bp|location=Sequence derived from alignment at H-elongata_contig133481:474..1634- (Himanthalia elongata Himel1 dioecious)back to top |