mRNA_H-elongata_contig133481.2377.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig133481.2377.1
Unique NamemRNA_H-elongata_contig133481.2377.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 360 bits (925), Expect = 9.780e-109
Identity = 182/387 (47.03%), Postives = 255/387 (65.89%), Query Frame = 1
Query:    1 MENLFEEATVKAVIKKANQQTAAGPSGLRDSHLQAALCNELVEDLAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALVE 1161
            +E  F   TV A I++ N Q + GPSGLR S LQ++L  EL E +A   +++F    LP  FW LHTSANLSA+G K RP+A GD+ RR++G V CR+YG   A++F+P+GQYGVAV GG E +A  A L  + G  +L+YD +N FNS+ R   LPALA+++P M+PYA+N+YAREP KLL+  D G + V+ S  GVQQGCNLGP CYSAG LK+LR+FRANPPV GA+ ++FIDD+ V+LP   + + AA   VT W+Q  +    ++LN+ KS+ L   G   +   E+ R  ++ T L V    MR+VGVPVG   + +        GEP +L++ + S+++AQ S QIL  S  +RL++LLR++PP +  + A+ +D  VE
Sbjct: 1154 VEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVE 1539          
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 4.530e-104
Identity = 180/384 (46.88%), Postives = 241/384 (62.76%), Query Frame = 1
Query:   13 FEEATVKAVIKKANQQTAAGPSGLRDSHLQAA-LCNELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
            FE   +K  +KKAN Q+A GP GLR S+LQA  + +   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FC +Y    A+ F+   Q+G  V GGVE +A TA L  + G TILS+D +N +NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ GS+EVV S +GVQQGCNLG F +  G L I++EF   PPV GA+ + ++DD+ V LPP L+ ++ AI  VT W+Q  L  + I L+  KS+ L   G+    LT  ++ ++  TGL+V    M +VGVPVGTE FQR F+     G PAEL+R L ++++ Q S+Q+L LS   RL +LLRT+ PSI    A  +D L+
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLM 503          
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 9.220e-104
Identity = 179/384 (46.61%), Postives = 244/384 (63.54%), Query Frame = 1
Query:   13 FEEATVKAVIKKANQQTAAGPSGLRDSHLQAA-LCNELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
            FE   +K  +KKAN Q+A GP GLR S+LQA  + +   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y    A+ F+   Q+G  V GGVE +A TA L  + G TILS+D +N +NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ GS+EVV S +GVQQGCNLG F +  G L I++EF   PPV G + + ++DD+   LPP L+ +M AI  VT W+Q+RL  + I L+  KS+ L   G+    LT  ++ ++   GL+V    M VVG+PVGTE+FQR+F+ K   G+PAEL+  L ++++ Q S+Q+L LS   RL +LLRT+ PSI    A  +D ++
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMM 503          
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 2.550e-102
Identity = 179/384 (46.61%), Postives = 244/384 (63.54%), Query Frame = 1
Query:   13 FEEATVKAVIKKANQQTAAGPSGLRDSHLQAA-LCNELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
            FE   +K  +KKAN Q+A GP GLR S+LQA  + +   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y    A+ F+   Q+G  V GGVE +A TA L  + G TILS+D +N +NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ GS+EVV S +GVQQGCNLG F +  G L I++EF   PPV G + + ++DD+   LPP L+ +M AI  VT W+Q+RL  + I L+  KS+ L   G+    LT  ++ ++   GL+V    M VVG+PVGTE+FQR+F+ K   G+PAEL+  L ++++ Q S+Q+L LS   RL +LLRT+ PSI    A  +D ++
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMM 503          
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 2.870e-93
Identity = 160/345 (46.38%), Postives = 216/345 (62.61%), Query Frame = 1
Query:  127 EDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
            E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y    A+ F+   Q+G  V GGVE +A TA L  + G TILS+D +N +NS+ R   LPA+A   P +  Y  N+YAR   KLLF ++ GS+EVV S +GVQQGCNLG F +  G L I++EF   PPV GA+ + ++DD+ V LPP L+ ++ AI  VT W+Q  L  + I L+  KS  L   G+    LT  ++ ++  TGL+V    M +VGVPVGTE FQR F+     G PAEL+  L ++++ Q S+Q+L +S   RL +LLRT+ PSI    A  +D+L+
Sbjct:    7 ETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLM 351          
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 1.800e-89
Identity = 159/351 (45.30%), Postives = 221/351 (62.96%), Query Frame = 1
Query:  109 LCNELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
            + +   E LA F+  VF     LP   W LHTSANLSALG+K RP+A G VLRR+I   F R+Y    A+ F+   Q+G  V GGVE +A TA L  + G TILS+D +N +NS+ R   LPA+A + P +V Y  N+YAR   KLLF ++ GS+EVV S +GVQQGCNLG F +  G L I++EF   PPV G + + ++DD+   LPP L+ +M AI  VT W+Q+RL  + I L+  KS+ L   G+    LT  ++ ++   GL+V    M VVG+PVGTE+FQR+F+ K   G+PAEL+  L ++++ Q S+Q+L LS   RL +LLRT+ PSI    A  +D ++
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMM 351          
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 8.630e-78
Identity = 136/278 (48.92%), Postives = 178/278 (64.03%), Query Frame = 1
Query:   13 FEEATVKAVIKKANQQTAAGPSGLRDSHLQAA-LCNELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQAL 840
            FE   +K  +KKAN Q+A GP GLR S+LQA  + +   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y    A+ F+   Q+G  V GGVE +A TA L  + G TILS+D +N +NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ GS+EVV S +GVQQGCNLG F +  G L I++EF   PPV G + + ++DD+   LPP L+ +M AI  VT W+Q+RL  + I L+  KS+ L
Sbjct:  120 FEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVL 397          
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 2.330e-47
Identity = 89/202 (44.06%), Postives = 127/202 (62.87%), Query Frame = 1
Query:  553 LDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALV 1158
            ++ GS+E+V S +GVQQGCNLG F +S G L  ++EF   PPV GA+ + ++DD+ V LPP L+ ++ AI  VT W+Q  L  + I L+  KS+ L   G     LT  ++ ++  TGL+V    M +VGVPVGTE FQR F+     G PAEL+R L ++++ Q S+Q+L LS   RL +LLRT+ PSI    A  +D L+
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLM 202          
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.470e-44
Identity = 126/393 (32.06%), Postives = 196/393 (49.87%), Query Frame = 1
Query:    4 ENLFEEATVKAVIKKANQQTAAGPSGLRDSHLQAALCNELV-EDLAA-----FATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAE-LVRALVSMEEAQVSFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALVE 1161
            E  F+   +  VI   +  + AG  G R SHL++    ++  ED        +  LV      P  FWTL   ++L ALG+K RPV  G   RR+I A   R++  K  + F+   Q+GVAV+GGVE +A+ A L  + G  I+  D  N FN+  R   +   A+ +P +V Y +  Y   P   ++ +D G    +E   GVQQG  +GP  +S   + I+ + +      G    +++DDIT+ L     L   ++  +T+ L   L    I +N+ KS AL   G     +T+QQR  ++  GLTV  + + VVGVP+GT+ + R+F  K +    AE L R L  M + QV+  I SLS   R +Y+ R + P++  +     D +V+
Sbjct:  535 EEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLK---DLTEESVQAMTD-LVDELAEVGIVVNRAKSSALPPPG---HMITDQQRRLLEGVGLTVAGEGITVVGVPIGTDNYVREFAMKVITEGGAEKLARMLPLMSDRQVANLITSLSLIQRSAYIERGIDPTLTKEACERLDNMVQ 920          
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 2.700e-40
Identity = 114/367 (31.06%), Postives = 180/367 (49.05%), Query Frame = 1
Query:   37 VIKKANQQTAAGPSGLRDSHLQAALCNELVED------LAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSIYRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQQGCNLGP--FCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLDMAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDTTGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVN-GEPAELVRALVSMEEAQVSFQILSLSTTSRLSYLLRTV 1110
            VI   +  + AG  G R SHL++ +  ++  +       + +  L+      P  FWTL   ++L ALG+K RPV  G   RR+I A   R +  K  + F+   Q+GVAV+GGVE +A+ A L  + G  ++  D  N FN+  R   +   A+ VP +V Y +  Y   P K ++ +D G    +E   GVQQG  +GP  FC++   + I+ + RA     G R  +++DDI  +    ++ +     +V   L   L    I +N+ KS AL   G     +T  +R  +   GL +  + + VVGVP+GT+ +  D   K +  G   +L R LV M + QV+  + S S T R  Y+ R +
Sbjct:    7 VINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTL--VPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENI---QVIPDLVDELEAVGIIVNRGKSSALPPPG---HDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMKVITEGGADKLARMLVRMPDKQVAHLVTSQSLTQRSGYIERGI 365          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133481.2377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN9.780e-10947.03Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KGJ4_9PHAE4.530e-10446.88Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE9.220e-10446.61Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE2.550e-10246.61Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE2.870e-9346.38Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE1.800e-8945.30Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ62_9PHAE8.630e-7848.92Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K541_9PHAE2.330e-4744.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE1.470e-4432.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE2.700e-4031.06Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig133481contigH-elongata_contig133481:474..1634 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score91.7
Seed ortholog evalue8.3e-16
Seed eggNOG ortholog400682.PAC_15702057
EggNOG free text desc.Ribonuclease H protein
EggNOG OGsKOG1075@1,KOG1075@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1161
Cds size1161
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929791.710404-CDS-H-elongata_contig133481:473..16341622929791.710404-CDS-H-elongata_contig133481:473..1634Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig133481 474..1634 -
1691679159.1788511-CDS-H-elongata_contig133481:473..16341691679159.1788511-CDS-H-elongata_contig133481:473..1634Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig133481 474..1634 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig133481.2377.1prot_H-elongata_contig133481.2377.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig133481 474..1634 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig133481.2377.1

>prot_H-elongata_contig133481.2377.1 ID=prot_H-elongata_contig133481.2377.1|Name=mRNA_H-elongata_contig133481.2377.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=387bp
MENLFEEATVKAVIKKANQQTAAGPSGLRDSHLQAALCNELVEDLAAFAT
LVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYG
RKPADYFQPRGQYGVAVSGGVETMALTATLGFEDGCTILSYDRQNGFNSI
YRHRFLPALAEIVPSMVPYASNLYAREPTKLLFALDGGSLEVVESMQGVQ
QGCNLGPFCYSAGSLKILREFRANPPVSGARAVSFIDDITVILPPELSLD
MAAIGKVTEWLQKRLGVESISLNQRKSQALLAYGVGPEQLTEQQRVEMDT
TGLTVVRQRMRVVGVPVGTEQFQRDFIQKAVNGEPAELVRALVSMEEAQV
SFQILSLSTTSRLSYLLRTVPPSIMCQTAANYDALVE
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mRNA from alignment at H-elongata_contig133481:474..1634-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig133481.2377.1 ID=mRNA_H-elongata_contig133481.2377.1|Name=mRNA_H-elongata_contig133481.2377.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1161bp|location=Sequence derived from alignment at H-elongata_contig133481:474..1634- (Himanthalia elongata Himel1 dioecious)
ATGGAGAACCTTTTCGAGGAAGCCACCGTAAAAGCTGTCATCAAGAAAGC CAACCAACAAACCGCGGCAGGTCCGTCCGGACTACGCGACAGTCATTTAC AGGCTGCGCTGTGTAATGAACTGGTCGAGGATCTCGCGGCGTTCGCGACG CTTGTTTTTTCCAGCCGCGTTTTGCCCCAAGTATTCTGGACACTGCACAC GAGCGCCAATCTTTCCGCACTGGGGCAAAAGGCGAGACCAGTGGCGTGCG GTGATGTCTTGCGGAGAGTTATTGGTGCTGTTTTCTGCCGCCGATACGGC AGGAAGCCGGCAGACTACTTCCAGCCCAGGGGGCAGTACGGCGTAGCAGT TTCAGGTGGAGTAGAGACAATGGCACTCACAGCAACACTGGGTTTCGAAG ATGGTTGCACCATTCTCTCATACGACAGACAAAACGGCTTCAACAGTATA TACCGCCACAGGTTCCTGCCAGCGCTAGCGGAAATTGTTCCCTCAATGGT CCCCTACGCATCTAACTTGTACGCAAGGGAACCCACAAAACTCCTGTTTG CACTAGATGGCGGAAGTTTAGAAGTGGTTGAATCAATGCAAGGAGTACAG CAAGGATGTAATCTAGGCCCATTTTGCTATAGCGCAGGCTCACTGAAGAT CCTAAGAGAATTCAGAGCTAATCCACCGGTGTCAGGAGCGAGAGCGGTTT CGTTCATCGACGACATCACGGTCATTTTACCACCAGAACTCTCTCTCGAT ATGGCAGCGATAGGGAAAGTTACGGAATGGTTACAGAAACGCCTGGGGGT AGAAAGCATCTCGCTGAACCAAAGAAAATCGCAGGCCTTGCTAGCATATG GAGTTGGGCCAGAACAACTGACGGAGCAGCAGCGGGTGGAAATGGATACC ACAGGGCTCACGGTGGTTCGACAGAGGATGAGGGTTGTGGGAGTACCAGT TGGAACAGAACAGTTCCAGCGCGATTTCATACAGAAGGCGGTTAATGGAG AACCAGCTGAGCTTGTGAGGGCGCTGGTCTCAATGGAGGAGGCCCAAGTG AGCTTTCAGATCTTGAGTTTATCTACCACTTCTCGCCTTTCATATCTCCT TCGAACAGTTCCGCCCTCCATCATGTGCCAAACTGCAGCAAATTACGACG CCCTGGTGGAG
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Coding sequence (CDS) from alignment at H-elongata_contig133481:474..1634-

>mRNA_H-elongata_contig133481.2377.1 ID=mRNA_H-elongata_contig133481.2377.1|Name=mRNA_H-elongata_contig133481.2377.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2322bp|location=Sequence derived from alignment at H-elongata_contig133481:474..1634- (Himanthalia elongata Himel1 dioecious)
ATGGAGAACCTTTTCGAGGAAGCCACCGTAAAAGCTGTCATCAAGAAAGC
CAACCAACAAACCGCGGCAGGTCCGTCCGGACTACGCGACAGTCATTTAC
AGGCTGCGCTGTGTAATGAACTGGTCGAGGATCTCGCGGCGTTCGCGACG
CTTGTTTTTTCCAGCCGCGTTTTGCCCCAAGTATTCTGGACACTGCACAC
GAGCGCCAATCTTTCCGCACTGGGGCAAAAGGCGAGACCAGTGGCGTGCG
GTGATGTCTTGCGGAGAGTTATTGGTGCTGTTTTCTGCCGCCGATACGGC
AGGAAGCCGGCAGACTACTTCCAGCCCAGGGGGCAGTACGGCGTAGCAGT
TTCAGGTGGAGTAGAGACAATGGCACTCACAGCAACACTGGGTTTCGAAG
ATGGTTGCACCATTCTCTCATACGACAGACAAAACGGCTTCAACAGTATA
TACCGCCACAGGTTCCTGCCAGCGCTAGCGGAAATTGTTCCCTCAATGGT
CCCCTACGCATCTAACTTGTACGCAAGGGAACCCACAAAACTCCTGTTTG
CACTAGATGGCGGAAGTTTAGAAGTGGTTGAATCAATGCAAGGAGTACAG
CAAGGATGTAATCTAGGCCCATTTTGCTATAGCGCAGGCTCACTGAAGAT
CCTAAGAGAATTCAGAGCTAATCCACCGGTGTCAGGAGCGAGAGCGGTTT
CGTTCATCGACGACATCACGGTCATTTTACCACCAGAACTCTCTCTCGAT
ATGGCAGCGATAGGGAAAGTTACGGAATGGTTACAGAAACGCCTGGGGGT
AGAAAGCATCTCGCTGAACCAAAGAAAATCGCAGGCCTTGCTAGCATATG
GAGTTGGGCCAGAACAACTGACGGAGCAGCAGCGGGTGGAAATGGATACC
ACAGGGCTCACGGTGGTTCGACAGAGGATGAGGGTTGTGGGAGTACCAGT
TGGAACAGAACAGTTCCAGCGCGATTTCATACAGAAGGCGGTTAATGGAG
AACCAGCTGAGCTTGTGAGGGCGCTGGTCTCAATGGAGGAGGCCCAAGTG
AGCTTTCAGATCTTGAGTTTATCTACCACTTCTCGCCTTTCATATCTCCT
TCGAACAGTTCCGCCCTCCATCATGTGCCAAACTGCAGCAAATTACGACG
CCCTGGTGGAGATGGAGAACCTTTTCGAGGAAGCCACCGTAAAAGCTGTC
ATCAAGAAAGCCAACCAACAAACCGCGGCAGGTCCGTCCGGACTACGCGA
CAGTCATTTACAGGCTGCGCTGTGTAATGAACTGGTCGAGGATCTCGCGG
CGTTCGCGACGCTTGTTTTTTCCAGCCGCGTTTTGCCCCAAGTATTCTGG
ACACTGCACACGAGCGCCAATCTTTCCGCACTGGGGCAAAAGGCGAGACC
AGTGGCGTGCGGTGATGTCTTGCGGAGAGTTATTGGTGCTGTTTTCTGCC
GCCGATACGGCAGGAAGCCGGCAGACTACTTCCAGCCCAGGGGGCAGTAC
GGCGTAGCAGTTTCAGGTGGAGTAGAGACAATGGCACTCACAGCAACACT
GGGTTTCGAAGATGGTTGCACCATTCTCTCATACGACAGACAAAACGGCT
TCAACAGTATATACCGCCACAGGTTCCTGCCAGCGCTAGCGGAAATTGTT
CCCTCAATGGTCCCCTACGCATCTAACTTGTACGCAAGGGAACCCACAAA
ACTCCTGTTTGCACTAGATGGCGGAAGTTTAGAAGTGGTTGAATCAATGC
AAGGAGTACAGCAAGGATGTAATCTAGGCCCATTTTGCTATAGCGCAGGC
TCACTGAAGATCCTAAGAGAATTCAGAGCTAATCCACCGGTGTCAGGAGC
GAGAGCGGTTTCGTTCATCGACGACATCACGGTCATTTTACCACCAGAAC
TCTCTCTCGATATGGCAGCGATAGGGAAAGTTACGGAATGGTTACAGAAA
CGCCTGGGGGTAGAAAGCATCTCGCTGAACCAAAGAAAATCGCAGGCCTT
GCTAGCATATGGAGTTGGGCCAGAACAACTGACGGAGCAGCAGCGGGTGG
AAATGGATACCACAGGGCTCACGGTGGTTCGACAGAGGATGAGGGTTGTG
GGAGTACCAGTTGGAACAGAACAGTTCCAGCGCGATTTCATACAGAAGGC
GGTTAATGGAGAACCAGCTGAGCTTGTGAGGGCGCTGGTCTCAATGGAGG
AGGCCCAAGTGAGCTTTCAGATCTTGAGTTTATCTACCACTTCTCGCCTT
TCATATCTCCTTCGAACAGTTCCGCCCTCCATCATGTGCCAAACTGCAGC
AAATTACGACGCCCTGGTGGAG
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