prot_H-elongata_contig133174.2360.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig133174.2360.1
Unique Nameprot_H-elongata_contig133174.2360.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
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BLAST of mRNA_H-elongata_contig133174.2360.1 vs. uniprot
Match: A0A6H5JYV9_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV9_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.490e-8
Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 MQALLSHERTENFLFLFEMFTELCAGVHPQVIYTDADQA 39
            MQALL++ERTE+F FLF +F ELC GV P+VI+TDADQA
Sbjct:  167 MQALLANERTEDFKFLFRVFRELCEGVQPEVIFTDADQA 205
[Close]
BLAST of mRNA_H-elongata_contig133174.2360.1 vs. uniprot
Match: A0A6H5K030_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K030_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 2.410e-7
Identity = 25/39 (64.10%), Postives = 34/39 (87.18%), Query Frame = 0 
Query:    1 MQALLSHERTENFLFLFEMFTELCAGVHPQVIYTDADQA 39
            MQALL++ERTE++ FLF +F ELC G+ P+V++TDADQA
Sbjct:   98 MQALLANERTEDYKFLFRVFRELCQGMQPEVMFTDADQA 136
[Close]
BLAST of mRNA_H-elongata_contig133174.2360.1 vs. uniprot
Match: A0A6H5KQ14_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ14_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.120e-6
Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 0 
Query:    1 MQALLSHERTENFLFLFEMFTELCAGVHPQVIYTDADQ 38
            MQALLS+ER+E+F+FL E F ELC G+ PQV +TD DQ
Sbjct:   63 MQALLSNERSEDFIFLMETFKELCGGLMPQVAFTDCDQ 100
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig133174.2360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JYV9_9PHAE1.490e-871.79SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K030_9PHAE2.410e-764.10MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KQ14_9PHAE1.120e-665.79SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig133174contigH-elongata_contig133174:131..870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig133174.2360.1mRNA_H-elongata_contig133174.2360.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig133174 71..1240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig133174.2360.1 ID=prot_H-elongata_contig133174.2360.1|Name=mRNA_H-elongata_contig133174.2360.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MQALLSHERTENFLFLFEMFTELCAGVHPQVIYTDADQAETSQSPKPTLH
RCTSFSCTTSMRTSGNMVEVLERASWQQFSRSSTQQHTLQLRTCSFSTKR
RPFGS*
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