mRNA_H-elongata_contig13159.2281.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Match: D8LCF8_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF8_ECTSI) HSP 1 Score: 330 bits (845), Expect = 3.550e-110 Identity = 168/205 (81.95%), Postives = 184/205 (89.76%), Query Frame = 1
Query: 19 KILYSELDQWREAETKRIKGAGGGERRRLALQELLHKETRLLQTIDRLKIAASHGGKERRTRRMLEVMSTPKMWEMSDGEVAEIHNPWTERARELQELYEGLEAPLLSVQERLDVLLHLKWTVGEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFLETPDFNPEVTRFVRVPPKHDKLTREGVAGLT-TVSC 630
++LY+ELDQWREAETK IK A GERR+LAL+ELLHKETRLLQTIDRLKI A+H GKERRTRRMLE+MS K WEM DGEV+EIH PWT RAR+LQ++YE LEAPLLSV+ERLDVLLHLKWTV EFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRF ETPDFNPE +RF+RVPPK+ KLT EG+ GLT VSC
Sbjct: 188 EVLYNELDQWREAETKSIKQAEVGERRKLALRELLHKETRLLQTIDRLKITAAHEGKERRTRRMLELMSASKQWEMGDGEVSEIHTPWTNRARDLQDMYEALEAPLLSVEERLDVLLHLKWTVSEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFAETPDFNPEASRFIRVPPKYGKLTDEGMVGLTGVVSC 392
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Match: A0A7S3XKM5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKM5_HETAK) HSP 1 Score: 244 bits (624), Expect = 1.660e-78 Identity = 123/187 (65.78%), Postives = 152/187 (81.28%), Query Frame = 1
Query: 19 KILYSELDQWREAETKRIKGAG-GGERRRLALQELLHKETRLLQTIDRLKIAASHGGKERRTRRMLEVMSTPKMWEMSDGEVAEIHNPWTERARELQELYEGLEAPLLSVQERLDVLLHLKWTVGEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFLETPDFNPEVTRFVRVPP 576
++LY+EL++WR AE KR++ AG G R+ A Q LLHKETRLLQTIDRLK AA+ G+ R +RML++++ PK WE+SDGEV E+H P+T RA EL+ELY GL APLL V ERLDVLLH+KWTV EFDC LTRDI ELVDREADLL+RGRGE +L LR+R+ NLFLRF+ETP+FNPE RF+++PP
Sbjct: 20 EVLYNELERWRAAEAKRVRAAGLGPADRQRAHQALLHKETRLLQTIDRLKAAAAKEGRAERVQRMLDLLAMPKKWELSDGEVTEVHTPFTTRAAELRELYRGLTAPLLGVDERLDVLLHVKWTVKEFDCPLTRDIVELVDREADLLNRGRGEKALEGLRRRVANLFLRFVETPEFNPEAARFLKIPP 206
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Match: A0A7S1GAU3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAU3_9STRA) HSP 1 Score: 243 bits (621), Expect = 1.610e-76 Identity = 128/201 (63.68%), Postives = 157/201 (78.11%), Query Frame = 1
Query: 19 KILYSELDQWREAETKRIKGAGGGERRRL-ALQELLHKETRLLQTIDRLKIAASHGGKERRTRRMLEVMSTPKMWEMSDGEVAEIHNPWTERARELQELYEGLEAPLLSVQERLDVLLHLKWTVGEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFLETPDFNPEVTRFVRVPPKHDKLTREGVAGLT 618
+ILY+EL+ WR ET+RI+ AG ER RL AL +LLHKET+LLQTIDRLKI A+ +ERR RMLE+MS PK WEMSDGE A++H P++ RA+ELQELY GL P+L+V ERLDVLLH+KWTV EFDC LTR++ +L+DREADLL+RGR E SL LR+RI NLFL+F+ETP+FNPE RF +VP D TR V +T
Sbjct: 168 EILYNELENWRAHETRRIEEAGLPERERLEALAQLLHKETKLLQTIDRLKIGATKENRERRIARMLELMSEPKKWEMSDGETAQVHTPFSTRAKELQELYSGLNLPMLTVDERLDVLLHVKWTVKEFDCLLTREVVDLIDREADLLNRGRSEKSLEGLRRRISNLFLQFIETPEFNPEAARFQKVP--RDLSTRPSVRPVT 366
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Match: A0A7S3FA20_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FA20_9EUKA) HSP 1 Score: 222 bits (566), Expect = 6.210e-67 Identity = 118/197 (59.90%), Postives = 148/197 (75.13%), Query Frame = 1
Query: 19 KILYSELDQWREAETKRIKGAGGGERRRL-ALQELLHKETRLLQTIDRLKIAASHGGKERRTRRMLEVMSTPKMWEMSDGEVAEIHNPWTERARELQELYEGLEAPLLSVQERLDVLLHLKWTVGEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFLETPDFNPEVTRFVRVPPKHDKLTREGV 606
++LY+EL+ WR ET+RI G G E RL AL LL KE +LLQTIDRL++ A+ +E+R R LE+MS PK W MSD EV+++H P+T RA+EL ELY GL PLL+V ERLDVLLH+KWTV EFDC LTRDI EL+DREAD+L+RGR E+SL LR+R NLFL+F+ETP+FNPE RF +VP H+ + R V
Sbjct: 294 ELLYNELEAWRLQETRRINGEGWEEPERLEALSRLLLKEQKLLQTIDRLRLQANDENREKRIRSTLEMMSAPKRWLMSDCEVSQVHTPFTTRAKELMELYHGLRLPLLTVDERLDVLLHVKWTVKEFDCNLTRDIVELIDREADMLNRGRAESSLIGLRKRAANLFLQFIETPEFNPEAGRFQKVP--HELIVRPNV 488
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Match: A0A7S2J4U9_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2J4U9_9EUKA) HSP 1 Score: 221 bits (564), Expect = 1.070e-66 Identity = 115/187 (61.50%), Postives = 145/187 (77.54%), Query Frame = 1
Query: 19 KILYSELDQWREAETKRIKGAGG-GERRRLA-LQELLHKETRLLQTIDRLKIAASHGGKERRTRRMLEVMSTPKMWEMSDGEVAEIHNPWTERARELQELYEGLEAPLLSVQERLDVLLHLKWTVGEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFLETPDFNPEVTRFVRVP 573
+ILY+EL+ WR ETKRI E RLA LQ+LL KE +LLQTIDRL++ A +++R R L++MS PK W+MSDGEVA++H P+T RA+EL ELY GL PLL++ ERLDVLLH+KWTV EFDC LTRD+ EL+DREAD+L+RGR EASL LR+R+ NLFL+F+ETP+FNPE RF +VP
Sbjct: 287 EILYNELEAWRVQETKRINEEEMFDEAERLAALQQLLLKEQKLLQTIDRLRLQADDENRDKRIRSTLQLMSAPKRWQMSDGEVAQVHTPFTTRAKELMELYNGLRLPLLTIDERLDVLLHVKWTVKEFDCNLTRDVVELIDREADMLNRGRSEASLTGLRKRLANLFLQFIETPEFNPEAARFQKVP 473
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Match: A0A7S3NAM1_9SPIT (Hypothetical protein n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3NAM1_9SPIT) HSP 1 Score: 218 bits (554), Expect = 1.820e-65 Identity = 111/195 (56.92%), Postives = 147/195 (75.38%), Query Frame = 1
Query: 19 KILYSELDQWREAETKRIKGAGG--GERRRLALQELLHKETRLLQTIDRLKIAASHGGKERRTRRMLEVMSTPKMWEMSDGEVAEIHNPWTERARELQELYEGLEAPLLSVQERLDVLLHLKWTVGEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFLETPDFNPEVTRFVRVPPKHDKLTR 597
+ILY EL+ WR +ETK+IK + E ++LALQ+LL+KET++LQ IDRLKI A+ KE + + L+ MS PK WE SD + E+H P+T RA+EL +LY GL+ P LS+ ERLDVLLH KWTV EFDC LTR+I +L+DREAD+L+RGR E+SL LR+R+ NLFL+F+ETP+FNPE RF +VP + K T+
Sbjct: 263 EILYEELEAWRLSETKKIKASTELKEEEKKLALQQLLYKETKILQQIDRLKIIANVANKEEKINKFLKAMSDPKNWERSDERMTEVHTPFTTRAKELMDLYNGLKLPYLSIDERLDVLLHTKWTVREFDCNLTREIVDLIDREADMLNRGRSESSLEGLRKRLANLFLQFIETPEFNPEAARFQKVPRELLKQTQ 457
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Match: A0A0M0J3P1_9EUKA (Iq and ubiquitin-like domain-containing n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J3P1_9EUKA) HSP 1 Score: 217 bits (553), Expect = 4.330e-65 Identity = 112/187 (59.89%), Postives = 143/187 (76.47%), Query Frame = 1
Query: 19 KILYSELDQWREAETKRIKGAG--GGERRRLALQELLHKETRLLQTIDRLKIAASHGGKERRTRRMLEVMSTPKMWEMSDGEVAEIHNPWTERARELQELYEGLEAPLLSVQERLDVLLHLKWTVGEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFLETPDFNPEVTRFVRVP 573
+ILY+EL+ WR ET RIK A + ALQ+LL KE +LLQTIDRL+ A +++R R L++MS PK W+MSDGEVA++H P+T RA+EL ELY GL P+L++ ERLDVLLH+KWTV EFDC LTRDI EL+DREAD+L+RGR E+SL LR+R+ NLFL+F+ETP+FNPE RF +VP
Sbjct: 284 EILYNELEAWRLHETARIKAAEEMNEVEKAEALQQLLLKEQKLLQTIDRLRQQADSENRDKRIRSTLQLMSAPKRWQMSDGEVAQVHTPFTTRAKELMELYNGLRLPMLTIDERLDVLLHVKWTVKEFDCNLTRDIVELIDREADMLNRGRSESSLTGLRKRLANLFLQFIETPEFNPESARFQKVP 470
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Match: A0A8J2EPI9_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2EPI9_9DINO) HSP 1 Score: 218 bits (556), Expect = 5.710e-65 Identity = 113/203 (55.67%), Postives = 147/203 (72.41%), Query Frame = 1
Query: 22 ILYSELDQWREAETKRIKGA--GGGERRRLALQELLHKETRLLQTIDRLKIAASHGGKERRTRRMLEVMSTPKMWEMSDGEVAEIHNPWTERARELQELYEGLEAPLLSVQERLDVLLHLKWTVGEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFLETPDFNPEVTRFVRVPPKHDKLTREGVAGLTTV 624
+L+ EL+ WR ET+RIK E++ AL++LLHKETRLLQT+D+LK A K + R+ LE MS PK+W SD E+ +H P+T RA+EL +LY GL PLLS+ ERLDVLLH+KWTV EFDC LTRDI +L+DREAD+L+RGR E+S LR+R+ NLFL+F+ETPDFNPE +RF +VP D + + V L+TV
Sbjct: 333 VLHKELEMWRVKETRRIKEDLDTSKEQKHQALEQLLHKETRLLQTLDKLKTQAHKQNKGAKVRKQLEQMSQPKVWRQSDNEITTVHTPYTTRAKELLDLYNGLNLPLLSIDERLDVLLHVKWTVKEFDCNLTRDIVDLIDREADMLNRGRSESSFAGLRKRLANLFLQFVETPDFNPEASRFQQVP--RDMIRQTAVQPLSTV 533
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Match: A0A8J8SW50_HALGN (Uncharacterized protein n=2 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8SW50_HALGN) HSP 1 Score: 214 bits (545), Expect = 1.820e-64 Identity = 107/187 (57.22%), Postives = 139/187 (74.33%), Query Frame = 1
Query: 19 KILYSELDQWREAETKRIKGAGG--GERRRLALQELLHKETRLLQTIDRLKIAASHGGKERRTRRMLEVMSTPKMWEMSDGEVAEIHNPWTERARELQELYEGLEAPLLSVQERLDVLLHLKWTVGEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFLETPDFNPEVTRFVRVP 573
++LY+EL+ WR ETK+IK +G + ++LALQ+LL+KET++LQ IDRLKI A K+ + L MS PK+W+ D E+H P+T RA+EL +LY GL P LS ERLDVLLH KWTV EFDC LTR+I +L+DREAD+L+RGRGEASL LR+R+ NLFL+F+ETP+FNPE RF +VP
Sbjct: 231 EVLYNELEAWRLNETKKIKASGELKEDEKKLALQQLLNKETKILQQIDRLKITAGSINKQDKINEFLRAMSDPKLWKRQDNRYTEVHTPFTTRAKELMDLYNGLRLPFLSTDERLDVLLHTKWTVKEFDCNLTREIVDLIDREADMLNRGRGEASLEGLRKRLSNLFLQFIETPEFNPEAARFQKVP 417
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Match: A0A8J1YVP8_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1YVP8_9DINO) HSP 1 Score: 215 bits (547), Expect = 7.150e-64 Identity = 111/203 (54.68%), Postives = 144/203 (70.94%), Query Frame = 1
Query: 22 ILYSELDQWREAETKRIKGAG--GGERRRLALQELLHKETRLLQTIDRLKIAASHGGKERRTRRMLEVMSTPKMWEMSDGEVAEIHNPWTERARELQELYEGLEAPLLSVQERLDVLLHLKWTVGEFDCRLTRDIAELVDREADLLSRGRGEASLRPLRQRIRNLFLRFLETPDFNPEVTRFVRVPPKHDKLTREGVAGLTTV 624
IL+ EL+ WR+ ET+RIK E + L++LLHKETRLLQT+D+LK+ A + + R+ LE M+ PK+W SD E +H P+T RA+EL +LY GL PLLS+ ERLDVLLH+KWTV EFDC LTRDI +L+DREADLL+RGR E+S LR+R+ NLFL+F+ETP+FNPE RF VP D + + V L+TV
Sbjct: 308 ILHKELEMWRKKETRRIKDDPDTSKEEKHQQLEQLLHKETRLLQTLDKLKLQAHKHNRAAKVRKQLESMAQPKVWTQSDNETTTVHTPYTTRAKELLDLYNGLNLPLLSIDERLDVLLHVKWTVKEFDCNLTRDIVDLIDREADLLNRGRSESSFTALRKRLSNLFLQFIETPEFNPEAARFQHVP--RDMIRQTAVQPLSTV 508 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13159.2281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig13159.2281.1 >prot_H-elongata_contig13159.2281.1 ID=prot_H-elongata_contig13159.2281.1|Name=mRNA_H-elongata_contig13159.2281.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=211bp MFFVASKILYSELDQWREAETKRIKGAGGGERRRLALQELLHKETRLLQTback to top mRNA from alignment at H-elongata_contig13159:374..2095+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig13159.2281.1 ID=mRNA_H-elongata_contig13159.2281.1|Name=mRNA_H-elongata_contig13159.2281.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1722bp|location=Sequence derived from alignment at H-elongata_contig13159:374..2095+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig13159:374..2095+ >mRNA_H-elongata_contig13159.2281.1 ID=mRNA_H-elongata_contig13159.2281.1|Name=mRNA_H-elongata_contig13159.2281.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1266bp|location=Sequence derived from alignment at H-elongata_contig13159:374..2095+ (Himanthalia elongata Himel1 dioecious)back to top |