prot_H-elongata_contig13144.2268.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig13144.2268.1
Unique Nameprot_H-elongata_contig13144.2268.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
BLAST of mRNA_H-elongata_contig13144.2268.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.280e-32
Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = 0
Query:    1 MNQQGQLGPNISTFKNRDLLDDLRSMLCADALVLSRSSLHFLTTALTRASTFYIPSECGPGRYNRASKVGPHPKVVPENTTLLLLEKPEAEVYGVEWQLGLESYSPYTSWNNTQMQVKEMIDYDGIE-LKKCCV 133
            M + G LG N+   KNR LL+D+R MLCADAL  SRSS+ FLT A +RA+TF++P+ CG G + R  +  P  K   +NTTLLLLEKP+AEVYG  W      YS Y +W++T  Q+ EM  + GIE ++KC V
Sbjct:  317 MAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMRR--PPVKATFDNTTLLLLEKPDAEVYGTAWPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKCSV 448          
BLAST of mRNA_H-elongata_contig13144.2268.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 1.180e-30
Identity = 66/134 (49.25%), Postives = 87/134 (64.93%), Query Frame = 0
Query:    1 MNQQGQLGPNISTFKNRDLLDDLRSMLCADALVLSRSSLHFLTTALTRASTFYIPSECGPGRYNRASKVGPHPKVVPENTTLLLLEKPEAEVYGVEWQLGLESYSPYTSWNNTQMQVKEMIDYDGIE-LKKCCV 133
            M   G LG N+  F NR LL D++ MLCADAL  SRSS+ FLT A +RA+TF++P+ CG G + R   V    K   +NTTLLLLEK E+EV+GV+W+     YS Y +W ++  Q+ EM  Y GI+ L+KC V
Sbjct:  181 MADAGVLGENVHLFNNRTLLTDMKEMLCADALATSRSSMSFLTFAHSRATTFFVPTPCGNGGFRRMKDVPV--KATFDNTTLLLLEKRESEVFGVDWRQNGSDYSVYKNWLDSPHQLLEMTTYKGIKGLQKCTV 312          
BLAST of mRNA_H-elongata_contig13144.2268.1 vs. uniprot
Match: D8LSV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV7_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 2.080e-19
Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = 0
Query:    1 MNQQGQLGPNISTFKNRDLLDDLRSMLCADALVLSRSSLHFLTTALTRASTFYIPSECGPGRYNRASKVGPHPKVVPENTTLLLLEKPEAEVYGVEWQLGLESYSPYTSWNNTQMQVKEMIDYDGIE-LKKCCV 133
            +++QG LG   + + +RDL  DLR MLCA+ +VL++SS+  L    +RA  F++P+ C  G               P     + L +P+ EVYG+EW+  L  YS Y  W NT  Q  EMI  D ++ +++CCV
Sbjct:   79 LDKQGLLGAPANFYPDRDLYTDLRDMLCAENVVLAKSSITRLLVRHSRAKRFFLPTSCARGG--------------PFFVDRICLYRPDVEVYGIEWKTTLNEYSVYDEWINTDAQRLEMITSDEVKSIQRCCV 198          
BLAST of mRNA_H-elongata_contig13144.2268.1 vs. uniprot
Match: A0A6H5L0Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z0_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 3.780e-18
Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = 0
Query:    1 MNQQGQLGPNISTFKNRDLLDDLRSMLCADALVLSRSSLHFLTTALTRASTFYIPSECGPGRYNRASKVGPHPKVVPENTTLLLLEKPEAEVYGVEWQLGLESYSPYTSWNNTQMQVKEMIDYDGIE-LKKCCV 133
            +++QG LG   + + +RDL  DLR MLCA+ +VL++SS+  L    +RA  F++P+ C  G               P     + L +P+ EVYG+EW+  L  YS Y  W NT  Q  EMI  D ++ +++CCV
Sbjct:  301 LDKQGLLGAPANFYADRDLYTDLRDMLCAENVVLAKSSITRLLVRHSRAKRFFLPTSCARGG--------------PFFVDRICLYRPDVEVYGIEWKTTLNEYSVYDEWINTDAQRLEMITSDEVKSIQRCCV 420          
BLAST of mRNA_H-elongata_contig13144.2268.1 vs. uniprot
Match: D7FHC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHC1_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.630e-16
Identity = 48/134 (35.82%), Postives = 80/134 (59.70%), Query Frame = 0
Query:    1 MNQQGQLGPNISTFKNRDLLDDLRSMLCADALVLSRSSLHFLTTALTRASTFYIPSECGPGRYNRASKVGPHPKVVPENTTLLLLEKPEAEVYGVEWQLGLESYSPYTSWN-NTQMQVKEMIDYDGIE-LKKCC 132
            +N+QG LG N+   K+R    DL++MLCAD L LS S+L  L  A +RA  F++P  C P  +          + V  N +++ L++PE +VYG++W+   ++Y+ Y SW+ N+ M   EM+  D ++ +++CC
Sbjct:  435 LNRQGYLGTNVGMHKDRSFWVDLQTMLCADNLALSHSTLSNLLLAHSRAKRFFLPWGCEPQPWTLKLN-----RFV--NASMICLQRPEVQVYGIDWRTTKDAYTVYDSWDPNSNMM--EMVVSDAVKGVQRCC 559          
BLAST of mRNA_H-elongata_contig13144.2268.1 vs. uniprot
Match: D7FSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ7_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 8.170e-16
Identity = 47/134 (35.07%), Postives = 79/134 (58.96%), Query Frame = 0
Query:    4 QGQLGPN---ISTFKNRDLLDDLRSMLCADALVLSRSSLHFLTTALTRASTFYIPSECGPGRYNRASKVGPH--PKVVPENTTLLLLEKPEAEVYGVEWQLGLESYSPYTSWNNTQMQVKEMIDYDGIELKKCC 132
            QG LG N   + T+K R L +DL++MLCADAL ++ S+L  L  A +RA  F++P  C P       ++G    P+ V  + +++ L++PE EVYG+EW+    +Y+ Y  W+ +  Q++ ++  D   ++ CC
Sbjct:  230 QGILGTNGTIVETYKKRSLWEDLQAMLCADALSVAHSTLTNLLLAHSRAKMFFLPWGCEP-------QIGDMMIPRFV--SASMICLQRPEVEVYGIEWRTTSNAYTVYNKWDPSVNQLEMIVSDDLKGVQHCC 354          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig13144.2268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FRV9_ECTSI1.280e-3250.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRV8_ECTSI1.180e-3049.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSV7_ECTSI2.080e-1936.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0Z0_9PHAE3.780e-1836.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHC1_ECTSI1.630e-1635.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSJ7_ECTSI8.170e-1635.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig13144contigH-elongata_contig13144:5576..6691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig13144.2268.1mRNA_H-elongata_contig13144.2268.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig13144 5566..6876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig13144.2268.1 ID=prot_H-elongata_contig13144.2268.1|Name=mRNA_H-elongata_contig13144.2268.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MNQQGQLGPNISTFKNRDLLDDLRSMLCADALVLSRSSLHFLTTALTRAS
TFYIPSECGPGRYNRASKVGPHPKVVPENTTLLLLEKPEAEVYGVEWQLG
LESYSPYTSWNNTQMQVKEMIDYDGIELKKCCV*
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