prot_H-elongata_contig1311.2250.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Match: A0A6A4F359_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F359_9STRA) HSP 1 Score: 145 bits (366), Expect = 5.230e-38 Identity = 86/217 (39.63%), Postives = 129/217 (59.45%), Query Frame = 0
Query: 7 DGEAEVVVVVHVDDILTHAKDKATMDIFPAELRQNFKLKDMGDVRCYMGCHITRTRKGRELKIDQQHLYLESMVEMFDVK--KGSKIPATSGMSTISKVDEPRNPEDKEKIRKFPYREAVGALMWTATMTRPDIASAGRAVTRFCENPGPAHEKTTMKIIQYLLHTKDWGIKYGGQ-GCELCMEAYTDSDFGACLDTRRSVSGAVFVLAKGAIIWYS 220
+GE E +V ++VDD+L ++ KA + A + + F++KDMG R +G I + R L I Q+ Y ES+++ F + K P G+ ++K DEP+ EDK K++ PYR VG+LM+ A TRPDI+ A ++RF ENPG H +K+++YLL TKD GI Y G G +L EAY+D+D+ D RRSVSG + ++ ++W S
Sbjct: 67 EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQK-AYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQIEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGMLLMMCGAPVVWRS 279
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.770e-37 Identity = 84/217 (38.71%), Postives = 128/217 (58.99%), Query Frame = 0
Query: 7 DGEAEVVVVVHVDDILTHAKDKATMDIFPAELRQNFKLKDMGDVRCYMGCHITRTRKGRELKIDQQHLYLESMVEMFDVKKGSK--IPATSGMSTISKVDEPRNPEDKEKIRKFPYREAVGALMWTATMTRPDIASAGRAVTRFCENPGPAHEKTTMKIIQYLLHTKDWGIKYGGQ-GCELCMEAYTDSDFGACLDTRRSVSGAVFVLAKGAIIWYS 220
+GE E +V ++VDD+L ++ KA + A + + F++KD+G R +G I + R L I Q+ Y ES+++ F + P G+ ++K DEP+ EDK K++ PYR VG+LM+ A TRPDI+ A ++RF ENPG H +K+++YLL TKD GI Y G G +L EAY+D+++ D RRSVSG + +L ++W S
Sbjct: 98 EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQK-AYTESIIKKFGQENAKPWLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDANWAGNRDDRRSVSGMLLMLCGAPVVWRS 310
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Match: A0A6A3VCN8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3VCN8_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.500e-37 Identity = 86/217 (39.63%), Postives = 128/217 (58.99%), Query Frame = 0
Query: 7 DGEAEVVVVVHVDDILTHAKDKATMDIFPAELRQNFKLKDMGDVRCYMGCHITRTRKGRELKIDQQHLYLESMVEMFDVK--KGSKIPATSGMSTISKVDEPRNPEDKEKIRKFPYREAVGALMWTATMTRPDIASAGRAVTRFCENPGPAHEKTTMKIIQYLLHTKDWGIKYGGQ-GCELCMEAYTDSDFGACLDTRRSVSGAVFVLAKGAIIWYS 220
+GE E +V ++VDD+L ++ KA + A + + F++KDMG R + I + R L I Q+ Y ES+++ F + K P G+ ++K DEP+ EDK K++ PYR VG+LM+ A TRPDI+ A ++RF ENPG H +K+++YLL TKD GI Y G G +L EAY+D+D+ D RRSVSG + +L ++W S
Sbjct: 43 EGEDECIVRLYVDDMLIASRQKAVIASEKAGIAEKFRIKDMGRARFILSIEIDYDIERRTLGISQK-AYTESIIKKFGQENTKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRS 255
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Match: A0A6A3DSS8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DSS8_9STRA) HSP 1 Score: 146 bits (368), Expect = 6.050e-37 Identity = 86/217 (39.63%), Postives = 129/217 (59.45%), Query Frame = 0
Query: 7 DGEAEVVVVVHVDDILTHAKDKATMDIFPAELRQNFKLKDMGDVRCYMGCHITRTRKGRELKIDQQHLYLESMVEMFDVK--KGSKIPATSGMSTISKVDEPRNPEDKEKIRKFPYREAVGALMWTATMTRPDIASAGRAVTRFCENPGPAHEKTTMKIIQYLLHTKDWGIKYGGQ-GCELCMEAYTDSDFGACLDTRRSVSGAVFVLAKGAIIWYS 220
+GE E +V ++VDD+L ++ KA + A + + F++KDMG R +G I + R L I Q+ Y ES+++ F + K P G+ ++K DEP+ EDK K++ PYR VG+LM+ + TRPDI+ A ++RF ENPG H +K+++YLL TKD GI Y G G +L EAY+D+D+ D RRSVSG + +L ++W S
Sbjct: 324 EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQK-AYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNWDDRRSVSGMLLMLCGAPVVWRS 536
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 144 bits (364), Expect = 1.360e-36 Identity = 85/217 (39.17%), Postives = 128/217 (58.99%), Query Frame = 0
Query: 7 DGEAEVVVVVHVDDILTHAKDKATMDIFPAELRQNFKLKDMGDVRCYMGCHITRTRKGRELKIDQQHLYLESMVEMFDVK--KGSKIPATSGMSTISKVDEPRNPEDKEKIRKFPYREAVGALMWTATMTRPDIASAGRAVTRFCENPGPAHEKTTMKIIQYLLHTKDWGIKYGGQ-GCELCMEAYTDSDFGACLDTRRSVSGAVFVLAKGAIIWYS 220
+GE E +V ++VDD+L ++ KA + A + + F++KD+G R +G I + R L I Q+ Y ES+++ F + K P G+ ++K DEP+ EDK K++ PYR VG+LM+ A TRPDI+ A ++RF ENPG H +K+++YLL TKD GI Y G G + EAY+D+D+ D RRSVSG + +L ++W S
Sbjct: 259 EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQK-AYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQ--PEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRS 471
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Match: A0A6A3HKQ8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HKQ8_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.380e-36 Identity = 84/217 (38.71%), Postives = 127/217 (58.53%), Query Frame = 0
Query: 7 DGEAEVVVVVHVDDILTHAKDKATMDIFPAELRQNFKLKDMGDVRCYMGCHITRTRKGRELKIDQQHLYLESMVEMFDVK--KGSKIPATSGMSTISKVDEPRNPEDKEKIRKFPYREAVGALMWTATMTRPDIASAGRAVTRFCENPGPAHEKTTMKIIQYLLHTKDWGIKYGGQ-GCELCMEAYTDSDFGACLDTRRSVSGAVFVLAKGAIIWYS 220
+GE E +V ++VDD+L ++ K + A + + F++KD+G R +G I + R L I Q+ Y ES+++ F + K P G+ ++K DEP+ E K K++ PYR VG+LM+ A TRPDI+ A ++RF ENPG H +K+++YLL TKD GI Y G G +L EAY+D+D+ D RRSVSG + +L ++W S
Sbjct: 98 EGEDECIVCLYVDDMLIASRQKTVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQK-AYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEVKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRS 310
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Match: A0A6A3L5P5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L5P5_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.840e-36 Identity = 85/217 (39.17%), Postives = 129/217 (59.45%), Query Frame = 0
Query: 7 DGEAEVVVVVHVDDILTHAKDKATMDIFPAELRQNFKLKDMGDVRCYMGCHITRTRKGRELKIDQQHLYLESMVEMFDVK--KGSKIPATSGMSTISKVDEPRNPEDKEKIRKFPYREAVGALMWTATMTRPDIASAGRAVTRFCENPGPAHEKTTMKIIQYLLHTKDWGIKYGGQ-GCELCMEAYTDSDFGACLDTRRSVSGAVFVLAKGAIIWYS 220
+GE E +V ++VDD+L ++ KA + A + + F++KD+G R +G I + R L I Q+ Y ES+++ F + K P G+ ++K DEP+ ED +K++ PYR VG+LM+ A TRPDI+ A ++RF ENPG H +K+++YLL TKD GI Y G G +L EAY+D+D+ D RRSVSG + +L ++W S
Sbjct: 98 EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGIIQK-AYTESIIKKFGQENAKPCLAPLEPGVQ-LTKGDEPQTEEDIDKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRS 310
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.160e-36 Identity = 86/217 (39.63%), Postives = 129/217 (59.45%), Query Frame = 0
Query: 7 DGEAEVVVVVHVDDILTHAKDKATMDIFPAELRQNFKLKDMGDVRCYMGCHITRTRKGRELKIDQQHLYLESMVEMFDVK--KGSKIPATSGMSTISKVDEPRNPEDKEKIRKFPYREAVGALMWTATMTRPDIASAGRAVTRFCENPGPAHEKTTMKIIQYLLHTKDWGIKYGGQ-GCELCMEAYTDSDFGACLDTRRSVSGAVFVLAKGAIIWYS 220
+GE E +V ++VDD+L ++ A + A + + F++KDMG R +G I + R L I Q+ Y ES+++ F + K P G+ ++K DEP+ EDK K++ PYR VG+LM+ A TRPDI+ A ++RF ENPG H +K+++YLL TKD GI Y G G +L EAY+D+D+ D RRSVSG + +L + ++W S
Sbjct: 590 EGEDECIVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQK-AYTESIIKKFGQENAKPCLTPLEPGVQ-LTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGAQL--EAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRS 802
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Match: A0A225UK66_9STRA (Integrase, catalytic core protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UK66_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.530e-36 Identity = 83/217 (38.25%), Postives = 127/217 (58.53%), Query Frame = 0
Query: 7 DGEAEVVVVVHVDDILTHAKDKATMDIFPAELRQNFKLKDMGDVRCYMGCHITRTRKGRELKIDQQHLYLESMVEMFDVK--KGSKIPATSGMSTISKVDEPRNPEDKEKIRKFPYREAVGALMWTATMTRPDIASAGRAVTRFCENPGPAHEKTTMKIIQYLLHTKDWGIKYGGQ-GCELCMEAYTDSDFGACLDTRRSVSGAVFVLAKGAIIWYS 220
+G+ E +V ++VDD+L ++DK + A + + F++KD+G R +G I G+ L I Q+ Y ES+++ F + K S +P + I K D P+ EDK K++ PYR +G+LM+ A TRPDIA ++RF ENPG AH +K+++YLL TKD GI Y G G +L AY+D+D+ D RRSVSG + ++ ++W S
Sbjct: 200 EGDDECIVCLYVDDMLIASRDKDVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMDGKTLGISQR-AYTESIIKKFGQENAKPSLMPLDPSLHLI-KDDGPQTKEDKAKMKSRPYRSLIGSLMYLACETRPDIAIVVAKLSRFLENPGEAHWTAGIKVVRYLLKTKDVGITYNGLLGTKLT--AYSDADWAGNRDDRRSVSGVMLMMCGAPVVWRS 412
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Match: A0A6A3HAR6_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HAR6_9STRA) HSP 1 Score: 140 bits (354), Expect = 5.020e-36 Identity = 85/217 (39.17%), Postives = 127/217 (58.53%), Query Frame = 0
Query: 7 DGEAEVVVVVHVDDILTHAKDKATMDIFPAELRQNFKLKDMGDVRCYMGCHITRTRKGRELKIDQQHLYLESMVEMFDVK--KGSKIPATSGMSTISKVDEPRNPEDKEKIRKFPYREAVGALMWTATMTRPDIASAGRAVTRFCENPGPAHEKTTMKIIQYLLHTKDWGIKYGGQ-GCELCMEAYTDSDFGACLDTRRSVSGAVFVLAKGAIIWYS 220
+GE E +V ++VDD+L ++ KA + A + + F++KD G R + I + R L I Q+ Y ES+++ F + K P G+ ++K DEP+ EDK K++ PYR VG+LM+ A TRPDI+ A ++RF ENPG H +K+++YLL TKD GI Y G G +L EAY+D+D+ D RRSVSG + +L ++W S
Sbjct: 98 EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDTGRARFILSIEIDYDMERRTLGISQK-AYTESIIKKFGQENAKPCLTPLEPGVQ-LTKSDEPQTEEDKAKMKSRPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWVGNRDDRRSVSGMLLMLCGAPVVWRS 310 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1311.2250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig1311.2250.1 ID=prot_H-elongata_contig1311.2250.1|Name=mRNA_H-elongata_contig1311.2250.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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