prot_H-elongata_contig130689.2223.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig130689.2223.1
Unique Nameprot_H-elongata_contig130689.2223.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length154
Homology
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: D7FLH1_ECTSI (Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH1_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 4.140e-78
Identity = 125/155 (80.65%), Postives = 140/155 (90.32%), Query Frame = 0
Query:    1 QYQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDD-GRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 154
            QYQPRVSGYWN LKVYF VDN YV++KLK+LL  ++KKDW+RLPSEDEVKDD GRPKFERP+ADVNAPDLYVPLMSFITFVL+TGYAKG+AAA +SD   TFSPEVLTEVTSSCIVT LL+VLLIRL LYLLNSPAVVLDLV+YTGY+ V L ++
Sbjct:   86 QYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAA-LSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYKYVGLCIN 239          
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A6H5JNN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN8_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 1.020e-77
Identity = 123/154 (79.87%), Postives = 140/154 (90.91%), Query Frame = 0
Query:    1 QYQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 154
            QYQPRVSGYWN LKVYF VDN YV++KLK+LL  +++KDW+RLPSEDEVKDDGRPKFERP+ADVNAPDLYVPLMSFITFVL+TGYAKG+AAA +SD   TFSPEVLTEVTSSCIVT LL+VLLIRL LYLLNSPAVVLDL++YTGY+ V L ++
Sbjct:  213 QYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLRKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKGSAAA-LSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLIAYTGYKYVGLCIN 365          
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A835YSN9_9STRA (Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN9_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.110e-47
Identity = 85/157 (54.14%), Postives = 112/157 (71.34%), Query Frame = 0
Query:    1 QYQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDE-VKDDGRP--KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 154
            +YQP VSG+W  LK YF VDN YV+RK K+LL P++KK W+R+P+E+     DG    KF RP  D NAPDLY+PLM+FIT  L++G+ KG A        + F+PEVL EVTSS +V  LL+VLL+RL LYLL +PA +LDLV++TGY+ V L ++
Sbjct:   19 RYQPGVSGFWALLKHYFAVDNAYVLRKFKVLLLPVLKKSWHRVPAEEAGAAQDGSAQFKFARPCVDENAPDLYLPLMAFITHALISGFVKGRA--------SNFTPEVLVEVTSSAMVVQLLEVLLVRLGLYLLGAPAAMLDLVAFTGYKFVALCIN 167          
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: W7TGL4_9STRA (Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGL4_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.440e-37
Identity = 79/176 (44.89%), Postives = 109/176 (61.93%), Query Frame = 0
Query:    1 QYQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDG----------------------RPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 154
            +Y P V+  W+ LK YF V++ YV RKL  L+FP  K+ W R     ++KD G                      RP+++ P+ D NAPDLY+PLM+F+T+VLVTGYAKG          N+F+PEVL EVTSSC+V  LL++ +IRL LYLL +PA +LDL++ TGY+ V L+ +
Sbjct:  127 RYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRR-----QMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTK--------NSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFN 289          
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A024GGU5_9STRA (Protein YIF1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGU5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.710e-33
Identity = 67/150 (44.67%), Postives = 92/150 (61.33%), Query Frame = 0
Query:    2 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPL 151
            Y P   G W  LK YF VDN YV  +LKILLFP   K+W R+    +  D  + K+  PI D+NAPDLY+PLM F+T++L+ GY KGA+        N FSP+V+    S C+V  L++V ++   LYLLNS    LDL++++GY+   L
Sbjct:   99 YIPGAYGVWGRLKHYFTVDNNYVKNRLKILLFPFWHKNWRRI---GDTTDPNQNKYAPPINDINAPDLYIPLMGFLTYILIVGYTKGAS--------NQFSPDVIGADASYCLVMQLIEVAILASFLYLLNSSVSFLDLIAFSGYKYTSL 237          
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: F0WGG6_9STRA (Protein YIF1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGG6_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.950e-33
Identity = 69/150 (46.00%), Postives = 91/150 (60.67%), Query Frame = 0
Query:    2 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPL 151
            Y P   G W  LK YF VDN YV  +LKILLFP   K+W RL    +  D    K+  PI D+NAPDLY+PLM F+T++L+ GY KGA+        N FSP+V+    S C+V  LL+V ++   LYLLNS    LDL++++GY+   L
Sbjct:  179 YIPGAYGVWERLKHYFTVDNNYVKNRLKILLFPFWHKNWRRL---GDTTDPNYNKYAAPINDINAPDLYIPLMGFLTYILIVGYTKGAS--------NQFSPDVIGADASYCLVMQLLEVAILASFLYLLNSSVSFLDLIAFSGYKYTSL 317          
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A8K1CBU8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBU8_PYTOL)

HSP 1 Score: 129 bits (325), Expect = 4.440e-33
Identity = 67/151 (44.37%), Postives = 97/151 (64.24%), Query Frame = 0
Query:    2 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRP-KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPL 151
            Y P   G W +LK YF V+N YV  +LK+LLFP   ++W R+ +E     DG+P ++  P  D+NAPDLY+PLM F+T++L+ GY KGA+        N FSP+V+    S C+V  L+++ ++   LYLLNS    LDLVS++GY+ +PL
Sbjct:  185 YLPGAYGVWGSLKYYFTVNNSYVKSRLKMLLFPFWHRNWRRMGTEST---DGKPNQYAPPSRDINAPDLYIPLMGFLTYILIVGYTKGAS--------NQFSPDVIGRDASYCLVMQLVEIGVLAACLYLLNSSISFLDLVSFSGYKYIPL 324          
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A0P1AQ40_PLAHL (Protein YIF1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQ40_PLAHL)

HSP 1 Score: 128 bits (322), Expect = 8.570e-33
Identity = 66/154 (42.86%), Postives = 98/154 (63.64%), Query Frame = 0
Query:    2 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRP-KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 154
            Y P   G W NLK YF V+N YV  +LK+LL P   K W R  + ++  DD +P ++  P  D NAPDLY+PLM F+T++L+ GY+KG +        N FSP+V+T+  S C+V  L+++ ++   LY+LNS    LDLVS++GY+ +PL ++
Sbjct:  163 YLPGAYGVWGNLKYYFTVNNSYVKSRLKMLLLPFRHKTWRRFGNGEQ--DDSKPMQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTS--------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVIN 306          
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A421H1I6_9STRA (Protein YIF1 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421H1I6_9STRA)

HSP 1 Score: 128 bits (322), Expect = 8.870e-33
Identity = 65/154 (42.21%), Postives = 100/154 (64.94%), Query Frame = 0
Query:    2 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRP-KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 154
            Y P   G W ++K YF V+N YV  +LKILL P   K+W R+ + D+  D+ +P ++  P  D NAPDLY+PLM F+T++L+ GY+KG +        N FSP+V+T+  S C+V  L+++ ++   LY+LNS    LDLVS++GY+ +PL ++
Sbjct:  184 YLPGAYGIWGSIKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGDQ--DESKPMQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTS--------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVIN 327          
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Match: A0A2P4YJM1_9STRA (Protein YIF1 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A2P4YJM1_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.320e-32
Identity = 65/154 (42.21%), Postives = 100/154 (64.94%), Query Frame = 0
Query:    2 YQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVKDDGRP-KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNTFSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVPLSLS 154
            Y P   G W +LK YF V+N YV  +LKILL P   K+W R+ + ++  D+ +P ++  P  D NAPDLY+PLM F+T++L+ GY+KG +        N FSP+V+T+  S C+V  L+++ ++   LY+LNS    LDLVS++GY+ +PL ++
Sbjct:  140 YLPGAYGVWGSLKYYFTVNNSYVKSRLKILLLPFRHKNWRRMGNGEQ--DESKPMQYAPPTRDSNAPDLYIPLMGFLTYILIVGYSKGTS--------NQFSPDVITKDASYCLVMQLIEIGVLAACLYVLNSSISFLDLVSFSGYKYIPLVIN 283          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130689.2223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLH1_ECTSI4.140e-7880.65Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JNN8_9PHAE1.020e-7779.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSN9_9STRA3.110e-4754.14Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W7TGL4_9STRA1.440e-3744.89Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A024GGU5_9STRA1.710e-3344.67Protein YIF1 n=1 Tax=Albugo candida TaxID=65357 Re... [more]
F0WGG6_9STRA3.950e-3346.00Protein YIF1 n=1 Tax=Albugo laibachii Nc14 TaxID=8... [more]
A0A8K1CBU8_PYTOL4.440e-3344.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1AQ40_PLAHL8.570e-3342.86Protein YIF1 n=1 Tax=Plasmopara halstedii TaxID=47... [more]
A0A421H1I6_9STRA8.870e-3342.21Protein YIF1 n=3 Tax=Phytophthora kernoviae TaxID=... [more]
A0A2P4YJM1_9STRA1.320e-3242.21Protein YIF1 n=4 Tax=Phytophthora TaxID=4783 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005578Yif1 familyPFAMPF03878YIF1coord: 10..151
e-value: 2.2E-39
score: 135.4
IPR005578Yif1 familyPANTHERPTHR14083YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEINcoord: 7..153
NoneNo IPR availablePANTHERPTHR14083:SF0YIP1-INTERACTING FACTOR HOMOLOGcoord: 7..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig130689contigH-elongata_contig130689:283..1594 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig130689.2223.1mRNA_H-elongata_contig130689.2223.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig130689 283..1594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig130689.2223.1 ID=prot_H-elongata_contig130689.2223.1|Name=mRNA_H-elongata_contig130689.2223.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp
QYQPRVSGYWNNLKVYFMVDNGYVVRKLKILLFPLMKKDWYRLPSEDEVK
DDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGAAAAAVSDDTNT
FSPEVLTEVTSSCIVTHLLQVLLIRLALYLLNSPAVVLDLVSYTGYQCVP
LSLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005578Yif1_fam