prot_H-elongata_contig130405.2207.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig130405.2207.1
Unique Nameprot_H-elongata_contig130405.2207.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length82
Homology
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 3.610e-20
Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 0
Query:    2 RTWQVHPGYLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLFGNIHQ 55
            R   VHPGYL++NAPLRHVSTS AGT+VAVAG+RG AVYSRPTNRWRLFGNI Q
Sbjct:  725 RVLPVHPGYLSSNAPLRHVSTSRAGTYVAVAGSRGFAVYSRPTNRWRLFGNIEQ 778          
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Match: A0A2V0P0B4_9CHLO (RIC1 domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P0B4_9CHLO)

HSP 1 Score: 62.4 bits (150), Expect = 1.780e-9
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   10 YLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLFGNIHQ 55
            YLAAN PL H + S +G  VAV+G RGLAVYSR T RWRLFGN+ Q
Sbjct:  616 YLAANWPLVHAAASPSGGDVAVSGRRGLAVYSRRTERWRLFGNVSQ 661          
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Match: A0A4D9CZK3_9STRA (RIC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZK3_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.430e-9
Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    6 VHPGYLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLFGNIHQVMCKAQLARFLKCGKTGSVSLDHLWAK 82
            V P Y + N P+  V+ S +G  +AVAG RGLA+YSRP  RWRLFGN+HQ   + ++A     G+   V +  LW++
Sbjct:  545 VPPAY-SVNVPVTLVAQSPSGQQLAVAGKRGLALYSRPQRRWRLFGNVHQER-ELEVAGMTWWGEDAVVVVAKLWSR 619          
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Match: A0A250X4W9_9CHLO (RIC1 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X4W9_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 4.530e-9
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   10 YLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLFGNIHQ---VMCKA 60
            Y+  N PL H S S+ G H+AVAG RGLA+YSR  N+WRLFG++ Q   + C+A
Sbjct:  604 YIGPNWPLLHTSVSTNGLHIAVAGLRGLALYSRAANKWRLFGDVSQERKIWCQA 657          
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Match: A0A8J4C0E2_9CHLO (RIC1 domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C0E2_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 6.200e-9
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 0
Query:   10 YLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLFGNI---HQVMCKA 60
            Y++AN PL+  + S++GT +AVAG  GLAVY+RP+ RWRLFG+I    QV C+A
Sbjct:  567 YVSANWPLQRSAISASGTDIAVAGRNGLAVYNRPSERWRLFGDISQERQVSCRA 620          
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Match: A0A7S3VNY5_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VNY5_DUNTE)

HSP 1 Score: 60.1 bits (144), Expect = 1.140e-8
Identity = 28/46 (60.87%), Postives = 38/46 (82.61%), Query Frame = 0
Query:   10 YLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLFGNIHQ 55
            Y+A+N P+ HV+ SS+G  +AVAG RGLA+YSR T+RWRLFG++ Q
Sbjct:  165 YIASNWPVVHVAVSSSGIDMAVAGQRGLALYSRLTDRWRLFGDVSQ 210          
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Match: A0A7S1T8D7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T8D7_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 3.080e-8
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 0
Query:    2 RTWQVHPGYLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLFGNIHQ 55
            R  +V   Y+A+N PL H + S+ G  +A AG RGLA+YSR + RWRLFG++ Q
Sbjct:   65 RHLRVPSAYMASNWPLVHAAVSADGYDIAAAGTRGLALYSRRSGRWRLFGDVSQ 118          
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Match: A0A0D2LPC2_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LPC2_9CHLO)

HSP 1 Score: 57.0 bits (136), Expect = 8.550e-8
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    9 GYLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLFGNIHQ 55
            GY+AA  PL H + S++G  VAV+G RGLAVY R   RWRLFG++ Q
Sbjct:   87 GYVAAGWPLVHAAASASGADVAVSGRRGLAVYGRHAERWRLFGDVTQ 133          
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Match: A0A8J9RCC0_9CHLO (Probable RAB6A-GEF complex partner protein 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RCC0_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 2.630e-7
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    5 QVHPGYLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLFGNIHQ 55
            Q+   YLAAN PL H + S+ G  +AVAG  GLA+YSR + RWRLFG++ Q
Sbjct:  520 QLPAPYLAANWPLLHAALSADGMDIAVAGRHGLALYSRRSARWRLFGDVSQ 570          
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Match: A0A7R9VWZ3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VWZ3_9CHLO)

HSP 1 Score: 54.7 bits (130), Expect = 6.010e-7
Identity = 30/54 (55.56%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   10 YLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLFGNIHQ---VMCKA 60
            YLA N PL   + S  G  VAVA  RGLA+YSR +NRWRLFG++ Q   V C+A
Sbjct:   48 YLAPNWPLVRTAVSPNGMDVAVAAQRGLALYSRASNRWRLFGDVSQERLVSCQA 101          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig130405.2207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LB77_ECTSI3.610e-2081.48SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A2V0P0B4_9CHLO1.780e-967.39RIC1 domain-containing protein n=1 Tax=Raphidoceli... [more]
A0A4D9CZK3_9STRA2.430e-944.16RIC1 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A250X4W9_9CHLO4.530e-953.70RIC1 domain-containing protein n=1 Tax=Chlamydomon... [more]
A0A8J4C0E2_9CHLO6.200e-955.56RIC1 domain-containing protein n=2 Tax=Volvox reti... [more]
A0A7S3VNY5_DUNTE1.140e-860.87Hypothetical protein (Fragment) n=1 Tax=Dunaliella... [more]
A0A7S1T8D7_9CHLO3.080e-850.00Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A0D2LPC2_9CHLO8.550e-857.45Uncharacterized protein (Fragment) n=1 Tax=Monorap... [more]
A0A8J9RCC0_9CHLO2.630e-754.90Probable RAB6A-GEF complex partner protein 1 n=1 T... [more]
A0A7R9VWZ3_9CHLO6.010e-755.56Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040096RAB6A-GEF complex partner protein 1PANTHERPTHR22746FAMILY NOT NAMEDcoord: 5..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig130405contigH-elongata_contig130405:1271..1516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig130405.2207.1mRNA_H-elongata_contig130405.2207.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig130405 1271..1516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig130405.2207.1 ID=prot_H-elongata_contig130405.2207.1|Name=mRNA_H-elongata_contig130405.2207.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp
ARTWQVHPGYLAANAPLRHVSTSSAGTHVAVAGARGLAVYSRPTNRWRLF
GNIHQVMCKAQLARFLKCGKTGSVSLDHLWAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040096Ric1