prot_H-elongata_contig12951.2159.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12951.2159.1
Unique Nameprot_H-elongata_contig12951.2159.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length223
Homology
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Match: A0A6H5KBP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP8_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 1.360e-95
Identity = 158/221 (71.49%), Postives = 175/221 (79.19%), Query Frame = 0
Query:    1 VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEVGRKVSDKIEALADLLCRE-NDVERSRTMVFTNTAASCRLACEALAERGLSVVPYHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMATNVVHHLXXXXXXXXXXXXXXATNFFDSSTKASRGSLLHGPEGSRLDGSFSRQRGFRKKFKKYGPSRTFQG 220
            VLAAATLPTYGLKSVDQYIKRAFP+A KIQQVHMH+HHPAIQQ F+EVG +V DKI+A+ DLL    ++ + SRTMVFTNTA+SC+ A EALAE G SVVPYHKD+ P ERL NL AL+SGRAKILVCTDLAARGIDVPSVT IVQMEMATNVV HL              ATNF+D  TK    S+    EGSRLDGSFSRQRGFR+KFKKYGPSR +QG
Sbjct:  242 VLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVSETDTSRTMVFTNTASSCKRAYEALAEEGFSVVPYHKDIVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDLTKDLVNSITEVGEGSRLDGSFSRQRGFRRKFKKYGPSRRYQG 462          
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Match: D7FR69_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR69_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 2.420e-94
Identity = 160/221 (72.40%), Postives = 175/221 (79.19%), Query Frame = 0
Query:    1 VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEVGRKVSDKIEALADLLCRE-NDVERSRTMVFTNTAASCRLACEALAERGLSVVPYHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMATNVVHHLXXXXXXXXXXXXXXATNFFDSSTKASRGSLLHGPEGSRLDGSFSRQRGFRKKFKKYGPSRTFQG 220
            VLAAATLPTYGLKSVDQYIKRAFP+A KIQQVHMH+HHPAIQQ F+EVG +V DKI+A+ DLL    +D + SRTMVFTNTAASC+ A EALAE G SVVPYHKD+ P ERL NL AL+SGRAKILVCTDLAARGIDVPSVT IVQMEMATNVV HL              ATNF+D  TK    S+    EGSRLDGSFSRQRGFR+KFKKYGPSR +QG
Sbjct:  442 VLAAATLPTYGLKSVDQYIKRAFPNARKIQQVHMHRHHPAIQQNFVEVGGQVFDKIQAVIDLLRDTVSDADTSRTMVFTNTAASCKRAYEALAEEGFSVVPYHKDIVPLERLANLHALRSGRAKILVCTDLAARGIDVPSVTNIVQMEMATNVVQHLHRLGRAARAGRTGKATNFYDDLTKDLVNSITEVGEGSRLDGSFSRQRGFRRKFKKYGPSRRYQG 662          
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Match: A0A836CM84_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM84_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.040e-42
Identity = 99/227 (43.61%), Postives = 129/227 (56.83%), Query Frame = 0
Query:    1 VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEV----GRKVSDKIEALADLLCRENDV------------ERSRTMVFTNTAASCRLACEALAERGLSVVPYHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMATNVVHHLXXXXXXXXXXXXXXATNFFDSSTKASRGSLLHGPEGSRLDGSFSRQRGFRKKFKK 211
            +LAAATLP+YGLKSV+  ++RAFP A +I   HMH+ HPA++QE++ V    G   +  + AL + L   N              E  R MVF NTAAS R A  AL   G++  PYH DV   +R   L   ++GRA+ LVCTDLAARG+D+P V  +VQ E A+NVV HL              AT  +D+S  A   S+    +   +D SFSR+RGFRKK KK
Sbjct:  323 ILAAATLPSYGLKSVEALVRRAFPRATRITADHMHRQHPALRQEWVRVEGPPGPSAARDV-ALLEALRAANTAAGIGDDDAAGAAEPLRAMVFCNTAASARAAHAALEAAGVAAAPYHGDVPAAQRAALLNEFRAGRARALVCTDLAARGLDIPGVDHVVQYEFASNVVQHLHRLGRAARAGRRGVATTLWDASCAALAESVRAAGDAGGVDASFSRKRGFRKKLKK 548          
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Match: A0A7S2XFB3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFB3_9EUKA)

HSP 1 Score: 149 bits (377), Expect = 3.910e-40
Identity = 87/216 (40.28%), Postives = 128/216 (59.26%), Query Frame = 0
Query:    1 VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEVGRKVSDKIEALADLLCRENDVERSRTMVFTNTAASCRLACEALA---ERGLSVVPYHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMATNVVHHLXXXXXXXXXXXXXXATNFFDSSTKASRGSLLHGPEGSRLDGSFSRQRGFRKKFKKYG 213
            VL+AAT+P  GLKSVD+ I++ FP+A  ++   MHKHHP+ QQ+F++  +   DK+  + + L  ++  +  +T+VF NTA   +   +AL    E    + PYHKD+   ER   L   +     +LVCTDL ARG+D+P V  ++Q + ATNVV HL          XX  +TN +D + +    ++L   EG+ LD SFSR+RGFRK  K+YG
Sbjct:   86 VLSAATIPNMGLKSVDRSIEKRFPNAEHVRAKLMHKHHPSTQQDFVKTTKDFDDKVSKVLESL-EKHSKDNPKTIVFANTAKDAQRFADALMDVYEHPDLIFPYHKDIPADERDSVLGLFRKTPNGVLVCTDLGARGLDIPDVRHVIQAQFATNVVQHLHRIGRATRAGXXGRSTNLYDEANEDLVDAILAAGEGN-LDHSFSRRRGFRKTVKRYG 299          
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Match: A0A7S4D991_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D991_HETAK)

HSP 1 Score: 146 bits (368), Expect = 1.560e-39
Identity = 80/163 (49.08%), Postives = 99/163 (60.74%), Query Frame = 0
Query:    1 VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEVGRKVSDKIEALADLLCRENDVERS-------RTMVFTNTAASCRLACEALAERGLSVVPYHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMATNVVHHL 156
            VLAAATLPTYGLKSVD Y+++ F  A ++    MH+HHP + Q+FIEVG  + +KIEAL   L  E    R        R MVF NT A+      ALA  G+    YHK   P ER   L   ++G + +LVCTDLAARG+DVP VT ++Q E A NVV HL
Sbjct:  107 VLAAATLPTYGLKSVDAYVRKHFKGAARVGTGLMHRHHPRLHQDFIEVGGSLGEKIEALLAYLDEEAAEGRGAGAPGTMRAMVFCNTVAAAEEVAAALAAEGVPCAAYHKKTPPAEREGALARFRAGESPVLVCTDLAARGLDVPGVTHVLQAEFAPNVVQHL 269          
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Match: W7TS57_9STRA (RNA helicase DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS57_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.840e-38
Identity = 95/237 (40.08%), Postives = 127/237 (53.59%), Query Frame = 0
Query:    1 VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEVGRKVSDKIEALADLLCR---------------------ENDVERS---RTMVFTNTAASCRLACEALAERGLSVVPYHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMATNVVHHLXXXXXXXXXXXXXXATNFFDSSTKASRGSLLHGPEGSRLDGSFSRQRGFRKKFKKYG 213
            VLAAATLP+YGLKSV++ +K+ FPSA ++    MHKHHP + Q F+E    +  KI  L  +L +                     E + + +   +TMVF NTA +      A+   G   V +HK+V  +ER  NL   +S +  +LVCTDLAARG+D+P V ++VQ+E A NVV HL              A NF+D        SL    +   L+ SFSRQRGFRKK KKYG
Sbjct:  387 VLAAATLPSYGLKSVEELVKKRFPSAVRVHTDLMHKHHPQLTQVFVEAPEDLEGKIAMLLQVLEKLRTKGEEARRAEGGKEXXXXXEGEAQATILPKTMVFLNTATAAARTQIAVQAAGFPSVAFHKEVRREEREANLQRFRSNQVPLLVCTDLAARGLDIPDVRQVVQVEFAPNVVQHLHRIGRAVRAGREGRAVNFYDLGAHDLVESLQLA-QADTLERSFSRQRGFRKKIKKYG 622          
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Match: A0A7S2R527_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R527_9STRA)

HSP 1 Score: 142 bits (359), Expect = 8.770e-38
Identity = 98/230 (42.61%), Postives = 130/230 (56.52%), Query Frame = 0
Query:    1 VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEV---------GRKVSDKIEA-----LADLLCRENDVER-SRTMVFTNTAASCRLACEALAERGLSVVPYHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMATNVVHHLXXXXXXXXXXXXXXATNFFDSST----KASRGSLLHGPEGSRLDGSFSRQRGFRKKFKK 211
            +L+AAT+PTYGLKSVD+ + + FP+A +++   +H+  P ++  ++EV         G  V  +  A     L +LL      +   RTMVF NTA +   ACE L + GL    YHK+V    R ENL    SG+  ILVCTD+AARGID+  V  +VQ E A+NVV HL      XXXXX   AT+F D S+    +  RG     P    LD SFSR+RGF+KK KK
Sbjct:   68 ILSAATIPTYGLKSVDKLVAKRFPNAARVENDLLHRTQPQLEHHWVEVESMGDEREGGATVGSRAFAARCLQLEELLRPATPSDPIPRTMVFANTATTAAAACEYLRKAGLPAAEYHKEVLVGIREENLGLFSSGQVPILVCTDMAARGIDIQGVQHVVQFEFASNVVQHLHRLGRTXXXXXQGTATHFVDPSSDLAERIRRGMETESP----LDDSFSRKRGFKKKLKK 293          
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Match: A0A0G4ESI9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESI9_VITBC)

HSP 1 Score: 137 bits (344), Expect = 4.030e-34
Identity = 87/231 (37.66%), Postives = 125/231 (54.11%), Query Frame = 0
Query:    1 VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEVGRKVS--DKIEALADLLCR----------ENDVERSRTMVFTNTAASCRLACEALAERGLSVVPYHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMATNVVHHLXXXXXXXXXXXXXXATNFF--DSSTKAS--RGSLL----HGPEGSRLDGSFSRQRGFRKKFKK 211
            ++ AATLP  G  SVD +++R FP A +++   MH+H P +QQ+FI +G   S  D++  L D +            E  V+  +T++F NT  S +    AL + G+ VVP H D+   ER+ NL A + G + ILVCTDLAARG+D+P +  ++Q + A NVV HL          X   A NF+  DS    S  + SL      G +G  L+ +FSR R  RKK +K
Sbjct:  268 IMVAATLPNRGSGSVDAFLERRFPEALRVRNSLMHQHLPGMQQDFIPIGYDASTRDRLNMLVDKVTEMQRDRASRGGEEAVDVGKTIIFANTVNSAKAVANALFDVGIPVVPCHADLRAAERISNLDAFRRGISSILVCTDLAARGLDIPRIATVIQFDFAPNVVAHLHRVGRAARAGXAGHAINFYGKDSEDLVSMIQESLKVAEERGSDGGLLEQAFSRNRSLRKKLRK 498          
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Match: C1EHR7_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EHR7_MICCC)

HSP 1 Score: 128 bits (321), Expect = 1.780e-30
Identity = 82/220 (37.27%), Postives = 117/220 (53.18%), Query Frame = 0
Query:    1 VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEVGRKVSDKIEALADLLCRENDV-ERSRTMVFTNTAASCRLACEALAERGLSVVPYHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMATNVVHHLXXXXXXXXXXXXXXATNFFDSSTKASRGSLLHGPE--GSRLDGSFSRQRGFRKKFKKYGPSRT 217
            V AAAT+ + G K+    I+  FP A  I+   +HK    + Q +++V    S + +AL   L   ++  +R RT+VF N+  +C      L  +GLS   +H +V  +ER   L +L +G   +LVCTD AARG+DVP V  +VQ E A N V +L               TN   S+  A     +   E  G+ ++G+FSR+R FRKKFKKYGPSRT
Sbjct:  447 VFAAATVMSNGKKTPGAMIRHGFPDARWIEGRRLHKAVATVDQTWVKVT--ASTRADALGRALALGDEKRQRDRTLVFVNSTRACEEVTAELIRQGLSAAAFHAEVGTRERSSRLVSLANGDVTVLVCTDSAARGVDVPEVVHVVQAEFAANAVDYLHRIGRTARCGASGRVTNLV-SNADADLVDAVRAAEAAGAPVEGAFSRKRSFRKKFKKYGPSRT 663          
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Match: A0A7S0PJX5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PJX5_MICPS)

HSP 1 Score: 127 bits (318), Expect = 4.420e-30
Identity = 81/220 (36.82%), Postives = 116/220 (52.73%), Query Frame = 0
Query:    1 VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEVGRKVSDKIEALADLLCR-ENDVERSRTMVFTNTAASCRLACEALAERGLSVVPYHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMATNVVHHLXXXXXXXXXXXXXXATNFFDSSTKASRGSLLHGPE--GSRLDGSFSRQRGFRKKFKKYGPSRT 217
            + AAAT+ + G K+    I+  FP A  I+   +HK    + Q ++ V    S++ +AL   L   + + +R RT+VF N+  +C      L  +GL+   +H DV   ER + L AL +G   +LVCTD AARG+DVP V  ++Q E A N V +L               TN   S   A     +   E  G+ ++G+FSR+R FRKKFKKYGPSRT
Sbjct:  436 LFAAATVMSNGKKTPGAMIRHGFPDARWIEGRRLHKAVATVAQTWVNVTS--SNRADALGRALALGDEERQRERTLVFVNSGDACEEVTAELIRQGLTAAAFHADVGTSERTKRLDALAAGDVTVLVCTDSAARGVDVPGVEHVIQAEFAANAVDYLHRIGRTARCGASGRVTNLV-SGADADLVEAVRAAEVAGAPVEGAFSRKRSFRKKFKKYGPSRT 652          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12951.2159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBP8_9PHAE1.360e-9571.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR69_ECTSI2.420e-9472.40DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A836CM84_9STRA1.040e-4243.61P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2XFB3_9EUKA3.910e-4040.28Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S4D991_HETAK1.560e-3949.08Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TS57_9STRA1.840e-3840.08RNA helicase DEAD-box type n=2 Tax=Monodopsidaceae... [more]
A0A7S2R527_9STRA8.770e-3842.61Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0G4ESI9_VITBC4.030e-3437.66Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
C1EHR7_MICCC1.780e-3037.27Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A7S0PJX5_MICPS4.420e-3036.82Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 85..166
e-value: 3.4E-22
score: 89.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 54..166
e-value: 4.6E-23
score: 81.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 55..213
score: 16.793
NoneNo IPR availableGENE3D3.40.50.300coord: 25..188
e-value: 6.5E-39
score: 135.0
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 14..183
NoneNo IPR availablePANTHERPTHR24031:SF627ATP-DEPENDENT RNA HELICASE DBPAcoord: 14..183
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 38..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12951contigH-elongata_contig12951:636..6379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12951.2159.1mRNA_H-elongata_contig12951.2159.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12951 636..6379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12951.2159.1 ID=prot_H-elongata_contig12951.2159.1|Name=mRNA_H-elongata_contig12951.2159.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=223bp
VLAAATLPTYGLKSVDQYIKRAFPSAHKIQQVHMHKHHPAIQQEFIEVGR
KVSDKIEALADLLCRENDVERSRTMVFTNTAASCRLACEALAERGLSVVP
YHKDVAPKERLENLTALKSGRAKILVCTDLAARGIDVPSVTRIVQMEMAT
NVVHHLHRLGRAARAGRTGRATNFFDSSTKASRGSLLHGPEGSRLDGSFS
RQRGFRKKFKKYGPSRTFQGQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase