prot_H-elongata_contig129496.2156.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Match: A0A6H5JST3_9PHAE (RNA_pol_L_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST3_9PHAE) HSP 1 Score: 189 bits (481), Expect = 2.310e-60 Identity = 94/113 (83.19%), Postives = 104/113 (92.04%), Query Frame = 0
Query: 1 RLRSCRLRLSYTPDTKVPNAGTFEVIKEDHTLGNLLRMQLLADKQVRFAGYIQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEIEGLREVFQEQVAAIKLVLEEEQFGA 113
RL +L+YTPDTK+P+AGTFE+IKEDHTLGNLLRMQLLAD+QVRFAGY+QPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQE+EGLREVFQEQVAA K E+EQFG+
Sbjct: 11 RLNDDEKKLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEMEGLREVFQEQVAAAKHAAEQEQFGS 123
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Match: D7G4D0_ECTSI (RNA polymerase II core subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D0_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.050e-59 Identity = 93/106 (87.74%), Postives = 102/106 (96.23%), Query Frame = 0
Query: 8 RLSYTPDTKVPNAGTFEVIKEDHTLGNLLRMQLLADKQVRFAGYIQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEIEGLREVFQEQVAAIKLVLEEEQFGA 113
RL+YTPDTK+P+AGTFE+IKEDHTLGNLLRMQLLAD+QVRFAGY+QPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQE+EGLREVFQEQVAA K E+EQFG+
Sbjct: 65 RLAYTPDTKIPHAGTFEIIKEDHTLGNLLRMQLLADRQVRFAGYMQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEMEGLREVFQEQVAAAKHAAEQEQFGS 170
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Match: A0A836CIX8_9STRA (Putative DNA-directed RNA polymerase II 13.6 kDa polypeptide n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX8_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.110e-37 Identity = 65/111 (58.56%), Postives = 82/111 (73.87%), Query Frame = 0
Query: 1 RLRSCRLRLSYTPDTKVPNAGTFEVIKEDHTLGNLLRMQLLADKQVRFAGYIQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEIEGLREVFQEQVAAIKLVLEEEQF 111
RL ++ Y PDTK+PNAG F + KEDHTLGNL+RMQLL D+QVRFAGY+ PHPLEN + +KVQTNG+ TP+DALS A EDL+ E++ L + F E V A K + E Q+
Sbjct: 11 RLNEGEEKVDYEPDTKIPNAGNFIIKKEDHTLGNLIRMQLLQDRQVRFAGYLMPHPLENIMRVKVQTNGEVTPMDALSTAIEDLTSEVDNLTQRFAEGVLACKRLQESRQY 121
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Match: K0SS38_THAOC (RNA_pol_L_2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SS38_THAOC) HSP 1 Score: 109 bits (272), Expect = 1.490e-28 Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 0
Query: 8 RLSYTPDTKVPNAGTFEVIKEDHTLGNLLRMQLLADKQVRFAGYIQPHPLENKIHIKVQTNGDNT-PVDALSAATEDLSQEIEGL 91
++ Y PDTKV NAGTF + KEDHT+GNLLRMQLL D QV+FAGY+ PHPL N+IH+KVQT+ P ++LSAA EDLS E + L
Sbjct: 19 KIEYQPDTKVANAGTFTLNKEDHTVGNLLRMQLLRDPQVKFAGYMHPHPLVNRIHLKVQTSTSQVAPTESLSAAIEDLSNETDHL 103
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Match: A0A6U1NZH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NZH5_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.660e-27 Identity = 57/114 (50.00%), Postives = 75/114 (65.79%), Query Frame = 0
Query: 1 RLRSCRLRLSYTPDTKVPNAGTFEVIKEDHTLGNLLRMQLLADKQVRFAGYIQPHPLENKIHIKVQTNGDNT-PVDALSAATEDLSQEIEGLREVFQEQVAAIKLVLEEEQFGA 113
RL +L+Y PDTK+PNAGTF + +EDHTLGNLLRMQLL D VRFAGY PHPL + + +K+QT P+ A+S + EDLS E + L + F+E + K ++ Q GA
Sbjct: 11 RLAEGEKKLTYEPDTKIPNAGTFTLNREDHTLGNLLRMQLLQDSSVRFAGYQHPHPLVHHLLVKIQTTDPPANPIQAMSTSIEDLSSEFDFLEQRFKEDIDRFK---QDRQSGA 121
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Match: A0A7R9WNF7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WNF7_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.980e-27 Identity = 53/94 (56.38%), Postives = 68/94 (72.34%), Query Frame = 0
Query: 7 LRLSYTPDTKVPNAGTFEVIKEDHTLGNLLRMQLLADKQVRFAGYIQPHPLENKIHIKVQTNGDNT-PVDALSAATEDLSQEIEGLREVFQEQV 99
+++ YT DTKV NAGTF++ KEDHT+GNL RMQLL D VRFAGY PHPL + +++K+QTN PV+ LS+A EDLS E + L FQE +
Sbjct: 19 VKIEYTADTKVTNAGTFKLNKEDHTVGNLFRMQLLRDPSVRFAGYYHPHPLVHFLNMKIQTNNSTVAPVEVLSSAIEDLSNETDHLTSQFQEAI 112
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Match: A0A7R9U3J4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3J4_9STRA) HSP 1 Score: 105 bits (262), Expect = 4.130e-27 Identity = 49/96 (51.04%), Postives = 71/96 (73.96%), Query Frame = 0
Query: 8 RLSYTPDTKVPNAGTFEVIKEDHTLGNLLRMQLLADKQVRFAGYIQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEIEGLREVFQEQVAAIK 103
+++Y DTK+PNAGTF +++EDHTLGNLLRM+LL D+ VRFAGYI PHPLE+ I ++VQ + TP+ +++ A + L Q+ + L + F+ QV K
Sbjct: 20 KVTYQKDTKIPNAGTFTIMREDHTLGNLLRMELLKDQNVRFAGYIAPHPLEHVIKLRVQAADNVTPIRSVTQAVDHLQQQFDTLSKSFESQVHKFK 115
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Match: A0A448ZBV9_9STRA (RNA_pol_L_2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV9_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.100e-26 Identity = 55/92 (59.78%), Postives = 64/92 (69.57%), Query Frame = 0
Query: 7 LRLSYTPDTKVPNAGTFEVIKEDHTLGNLLRMQLLADKQVRFAGYIQPHPLENKIHIKVQTNGDNT-PVDALSAATEDLSQEIEGLREVFQE 97
L++ YT DTKV NAGTF KEDHT+GNL RMQLL D VRFAGY+ PHPL I +K+QTN PV+ LSAA +DLS E + L FQE
Sbjct: 19 LKIVYTADTKVTNAGTFRFNKEDHTVGNLFRMQLLRDPSVRFAGYLHPHPLVYFIDLKIQTNNSTVAPVEVLSAAIDDLSNETDHLMTQFQE 110
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Match: A0A1I8A8U0_9BILA (RNA_pol_L_2 domain-containing protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8A8U0_9BILA) HSP 1 Score: 102 bits (255), Expect = 4.500e-26 Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 0
Query: 8 RLSYTPDTKVPNAGTFEVIKEDHTLGNLLRMQLLADKQVRFAGYIQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEIEGLREVFQEQV 99
++++ DTKVPNA F V+KEDHTLGNL++ QLL D QV FAGY PHPL++KI I++QT D TP DAL++A DL E+ E F++ V
Sbjct: 18 KITFEKDTKVPNAAIFTVLKEDHTLGNLIKHQLLKDPQVLFAGYRNPHPLDHKIVIRIQTTSDTTPADALTSAITDLLAELSLFEERFRDAV 109
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Match: A0A0K0DYM0_STRER (RNA_pol_L_2 domain-containing protein n=5 Tax=Strongyloididae TaxID=6246 RepID=A0A0K0DYM0_STRER) HSP 1 Score: 102 bits (255), Expect = 5.490e-26 Identity = 49/92 (53.26%), Postives = 62/92 (67.39%), Query Frame = 0
Query: 8 RLSYTPDTKVPNAGTFEVIKEDHTLGNLLRMQLLADKQVRFAGYIQPHPLENKIHIKVQTNGDNTPVDALSAATEDLSQEIEGLREVFQEQV 99
++S+ DTKVPNA FE++KEDHTLGNLL+ QLL D V FAGY PHPLE+K H+++QT D TP L A DL E+ + F+E V
Sbjct: 18 KISFEKDTKVPNAAIFEIVKEDHTLGNLLKHQLLKDPNVLFAGYRNPHPLEHKFHLRIQTTPDTTPTQVLLDAISDLIAELSMTEQYFKESV 109 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig129496.2156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig129496.2156.1 ID=prot_H-elongata_contig129496.2156.1|Name=mRNA_H-elongata_contig129496.2156.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bpback to top |