prot_H-elongata_contig12902.2134.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12902.2134.1
Unique Nameprot_H-elongata_contig12902.2134.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
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BLAST of mRNA_H-elongata_contig12902.2134.1 vs. uniprot
Match: D7FZ16_ECTSI (MRG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ16_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 3.460e-49
Identity = 91/129 (70.54%), Postives = 105/129 (81.40%), Query Frame = 0 
Query:    6 EPGKSASAAPPSRLALSLKTAQAVPVNVEVQLTPQAIRRAGSMAYDYVPGQYYAVSPYAEDGLVSRCGKNGRDVTITFEIRDMTSGGEGVRLSAVVCKRAQKLQYYFFKAVEFLLPGKFLFNFFVNSTK 134
            EPGKSAS APP RLALS KTAQAV V+ EV L P+ I R+GS AY +  G+YYAV+PYAEDG+VSRCGK+G++V + FEIRDMT+GGEGV LSA  CK+ QK QYYFF+AVEFLLPGKFLF F   STK
Sbjct:    9 EPGKSASIAPPQRLALSDKTAQAVFVDTEVLLEPEVIGRSGSDAYGWARGKYYAVAPYAEDGVVSRCGKDGKEVAVRFEIRDMTAGGEGVHLSATECKKVQKSQYYFFQAVEFLLPGKFLFIFSAKSTK 137
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BLAST of mRNA_H-elongata_contig12902.2134.1 vs. uniprot
Match: A0A6H5KRJ0_9PHAE (MRG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ0_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 3.460e-49
Identity = 91/129 (70.54%), Postives = 105/129 (81.40%), Query Frame = 0 
Query:    6 EPGKSASAAPPSRLALSLKTAQAVPVNVEVQLTPQAIRRAGSMAYDYVPGQYYAVSPYAEDGLVSRCGKNGRDVTITFEIRDMTSGGEGVRLSAVVCKRAQKLQYYFFKAVEFLLPGKFLFNFFVNSTK 134
            EPGKSAS APP RLALS KTAQAV V+ EV L P+ I R+GS AY +  G+YYAV+PYAEDG+VSRCGK+G++V + FEIRDMT+GGEGV LSA  CK+ QK QYYFF+AVEFLLPGKFLF F   STK
Sbjct:    9 EPGKSASIAPPKRLALSDKTAQAVFVDTEVLLEPEVIGRSGSDAYGWARGKYYAVAPYAEDGVVSRCGKDGKEVAVRFEIRDMTAGGEGVHLSATECKKVQKSQYYFFQAVEFLLPGKFLFIFSAKSTK 137
[Close]
BLAST of mRNA_H-elongata_contig12902.2134.1 vs. uniprot
Match: A0A836CCU0_9STRA (MRG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCU0_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 8.850e-7
Identity = 41/110 (37.27%), Postives = 54/110 (49.09%), Query Frame = 0 
Query:   27 QAVPVNVEVQLTPQAIRRAGSMAYDYVPGQYYAVSPYAEDGLVSRCGKNGRDVTITFEIRDMTSGGEGVRLSAVV--CKRAQKLQYYFFKAVEFLLPGKFLFNFFVNSTK 134
            +A PV +     P+ I R     +   P  YYA++ YAEDG+VSR G+  R     F I    + GE VRL+ V       Q +QYYFF    FL  G++L  F   S K
Sbjct:   14 KAPPVQLTKAPDPEEIHR---FIFPEKPKLYYAIAVYAEDGVVSRTGREVRVQMSVFNI----ARGEEVRLTGVTDHISSVQVVQYYFFAPPVFLWAGQYLLKFTAISKK 116
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12902.2134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FZ16_ECTSI3.460e-4970.54MRG domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KRJ0_9PHAE3.460e-4970.54MRG domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CCU0_9STRA8.850e-737.27MRG domain-containing protein n=1 Tax=Tribonema mi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12902contigH-elongata_contig12902:1612..7638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12902.2134.1mRNA_H-elongata_contig12902.2134.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12902 1612..7638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12902.2134.1 ID=prot_H-elongata_contig12902.2134.1|Name=mRNA_H-elongata_contig12902.2134.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
MANKAEPGKSASAAPPSRLALSLKTAQAVPVNVEVQLTPQAIRRAGSMAY
DYVPGQYYAVSPYAEDGLVSRCGKNGRDVTITFEIRDMTSGGEGVRLSAV
VCKRAQKLQYYFFKAVEFLLPGKFLFNFFVNSTK*
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