prot_H-elongata_contig12895.2130.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12895.2130.1
Unique Nameprot_H-elongata_contig12895.2130.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Match: A0A6H5KVK0_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVK0_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 3.640e-25
Identity = 48/104 (46.15%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    2 YNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQEHMNINDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSCRVSVE 105
            YNGHKR HA  F+ ++TP+G+ V L+ PV G R+++++   SGL + +    +     Y +YGDPAYGLS H+   + A+ V  LTP++ +FNKRMS CRV+VE
Sbjct:   12 YNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVE 115          
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 5.780e-24
Identity = 48/104 (46.15%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    2 YNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQEHMNINDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSCRVSVE 105
            YNGHKR HA  F+ ++TP+G+ V L+ PV G R+++++   SGL + +    +     Y +YGDPAYGLS H+   + A+ V  LTP++ +FNKRMS CRV+VE
Sbjct:  161 YNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVE 264          
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 2.080e-23
Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = 0
Query:    2 YNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQEHMNI-NDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSCRVSVE 105
            YNGHKR HA  F+ ++TP+G+ V ++ PV G R+++Y+   SGL Q +  H N  +   Y +YGDPAYGLS H+   + A+    LTP + +FN+RMS CRV+VE
Sbjct:  180 YNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHSNSPSGHPYCLYGDPAYGLSDHLACPFSASSHGPLTPDMADFNQRMSHCRVAVE 284          
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Match: A0A6H5KY46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY46_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 2.820e-23
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 0
Query:    2 YNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQEHMNINDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSCRVSVE 105
            YNGHKR HA  F+ ++TP+G+ V L+ PV G R+ +++    GL + +    +     Y +YGDPAYGLS H+   + A+    LTP++ +FNKRMS CRV+VE
Sbjct:   61 YNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHHSFILAQFGLMEKLSMQNSPIGHPYYLYGDPAYGLSNHLVCPFSASSAGPLTPEMADFNKRMSHCRVTVE 164          
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Match: A0A6H5KRJ1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ1_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 3.220e-23
Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 0
Query:    1 MYNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQEHMNINDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSCRVSVE 105
            +YNGHKR HA  F+ ++TP+G+ V L+ PV G R+ +++   SGL + M    +     Y + GDPAYGLS H+   + A+ V  LTP++ +FNKRMS CRV+VE
Sbjct:  185 LYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHYSFILAQSGLMEKMSVLNSPTSHPYCLCGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVE 289          
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Match: A0A6H5K0J0_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J0_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 4.800e-23
Identity = 47/104 (45.19%), Postives = 67/104 (64.42%), Query Frame = 0
Query:    2 YNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQEHMNINDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSCRVSVE 105
            YNGHKR HA  F+ I+TP+G+ V L+ PV G R++++M   SGL + +    +     Y +YGDPAYGL  H+   + A+ V   TP++ +FNKR S CRV+VE
Sbjct:   91 YNGHKRKHAMKFQGIITPDGLFVDLWGPVAGTRHDSFMLAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLRNHLVCPFSASSVGPFTPEMADFNKRTSHCRVTVE 194          
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Match: A0A6H5KLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS3_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 5.150e-23
Identity = 49/104 (47.12%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    2 YNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQEHMNINDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSCRVSVE 105
            YN HK  HAF F+ +VTP+G+   L+ PV G R++ Y+   SGL Q +    + + Q Y +YGDPAYGLS H+   + A+ V  LTP++ +FNKR+S+CRV+VE
Sbjct:  528 YNDHKGKHAFKFQGVVTPDGLFADLWGPVVGTRHDNYILAQSGLMQKLAMLNSPSGQPYYLYGDPAYGLSNHLICPFSASSVGPLTPEVADFNKRISACRVTVE 631          
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Match: A0A6H5K191_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K191_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.390e-22
Identity = 47/104 (45.19%), Postives = 68/104 (65.38%), Query Frame = 0
Query:    2 YNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQEHMNINDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSCRVSVE 105
            YNGHKR  A  F+ ++TP+G+ V L+ PV G R+++++   SGL + +    N     Y + GDPAYGLS H+   + A+ V  LTP++ +FNKRMS CRV+VE
Sbjct:    3 YNGHKRKQAMKFQGVITPDGLFVDLWGPVAGTRHDSFIQ--SGLMEKLSMLSNPAGHPYCLCGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVE 104          
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Match: A0A6H5JJ08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ08_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 5.120e-22
Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = 0
Query:    2 YNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQEHMNINDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSCRVSVE 105
            YNGHKR HA  F+ ++TP+G+ V L+ PV G R+++++   SGL + +    +     Y +YGDPAYGLS ++   + A+ V   TP++ +FNKRMS CRV+VE
Sbjct:  199 YNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSMLNSPTGHPYCLYGDPAYGLSNYLVCPFSASSVGPRTPEMADFNKRMSHCRVTVE 302          
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 7.650e-20
Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    2 YNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQEHMNI-NDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSCRVSVE 105
            YNG+KR HA  F+ +VTP+G+ V LY    G  ++ Y+   S L + +Q HMN  +   Y VYGDPAYG + HI   + A++   LTP + +FNK MS CRV+VE
Sbjct:  250 YNGYKRKHAIKFQGVVTPDGLFVDLYDAEVGTTHDGYLLAESTLLEKLQTHMNSPSGHPYCVYGDPAYGQTDHIQCPFSASVNGPLTPAMRKFNKSMSQCRVTVE 354          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12895.2130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVK0_9PHAE3.640e-2546.15DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KB08_9PHAE5.780e-2446.15DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D8LL85_ECTSI2.080e-2346.67DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KY46_9PHAE2.820e-2344.23DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KRJ1_9PHAE3.220e-2345.71DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K0J0_9PHAE4.800e-2345.19DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KLS3_9PHAE5.150e-2347.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K191_9PHAE1.390e-2245.19DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JJ08_9PHAE5.120e-2244.23DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JS57_9PHAE7.650e-2045.71DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 1..105
e-value: 2.1E-9
score: 37.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12895contigH-elongata_contig12895:5906..6223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12895.2130.1mRNA_H-elongata_contig12895.2130.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12895 5873..6409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12895.2130.1 ID=prot_H-elongata_contig12895.2130.1|Name=mRNA_H-elongata_contig12895.2130.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MYNGHKRCHAFMFKEIVTPEGVIVSLYVPVEGARYEAYMYQCSGLGQLMQ
EHMNINDQAYQVYGDPAYGLSQHIYTLYKATIVVDLTPQICEFNKRMSSC
RVSVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027806HARBI1_dom