prot_H-elongata_contig12868.2110.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12868.2110.1
Unique Nameprot_H-elongata_contig12868.2110.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length310
Homology
BLAST of mRNA_H-elongata_contig12868.2110.1 vs. uniprot
Match: D7FXZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ5_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 2.120e-87
Identity = 175/318 (55.03%), Postives = 201/318 (63.21%), Query Frame = 0
Query:    1 GTIWKTLESDPSFSKLVAALDGTALSRRLNTLDKTA---RYTLFAPDDEAIDASQDFPKD-PTSLEVLMSFHTLAEGAYPQSVNGAHFSPQLFKADPAGGILSRDYYREFYAEAFVGGQVTSLAGPLLNVTRAPTPIDASWTFCPSLPLRARDDLEDRQATQVPETLSEPQSPMLSDIAADVAATAKAVSAAERAASSLLIEGVPVSETDITATNGVVHRLSTRAIAAPATAAGVLLNPPFPLSSAGS----------FAAMGELLRLAWPLVNGTLAGDGPLTVLAPTDAAFDLAIAAGQLPPRPWNPWKQSASSSS 304
            GTIWKTL SDPSFS L AAL+ T+L+  L+     A    YTLFAPDD+AI AS +FP+D P +LEVL+SFHTLA G YP S++GAHFS QL+K DP  G LSRDYYREFYA++F  GQ TSLAGPLLNV+RA +                                     P +                   +A SLL+EGVPVSE DITATNGVVHRLS   +A P T AGVLLNPPFPLS+AG           F AMGEL+RLAWPLVN TL  +GPLTVLAPTDAAFD+AIAAG LPPRPW     ++SSSS
Sbjct:  130 GTIWKTLCSDPSFSLLAAALNSTSLAATLDANGGGAGAMAYTLFAPDDDAIKASPEFPQDDPKALEVLLSFHTLAAGVYPLSLSGAHFSQQLYKVDPTSGSLSRDYYREFYADSFEDGQFTSLAGPLLNVSRASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRPPV------------------HSALSLLVEGVPVSEADITATNGVVHRLSAAVMAPPDTVAGVLLNPPFPLSAAGGRGGSGGPGSGFGAMGELVRLAWPLVNTTLTEEGPLTVLAPTDAAFDIAIAAGDLPPRPWYEVNSTSSSSS 429          
BLAST of mRNA_H-elongata_contig12868.2110.1 vs. uniprot
Match: A0A6H5J734_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J734_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 6.160e-83
Identity = 173/324 (53.40%), Postives = 201/324 (62.04%), Query Frame = 0
Query:    1 GTIWKTLESDPSFSKLVAALDGTALSRRLNTLDKTA---RYTLFAPDDEAIDASQDFPKD-PTSLEVLMSFHTLAEGAYPQSVNGAHFSPQLFKADPAGGILSRDYYREFYAEAFVGGQV---TSLAGPLLNVTRAPTPIDASWTFCPSLPLRARDDLEDRQATQVPETLSEPQSPMLSDIAADVAATAKAVSAAERAASSLLIEGVPVSETDITATNGVVHRLSTRAIAAPATAAGVLLNPPFPLSSAGS----------FAAMGELLRLAWPLVNGTLAGDGPLTVLAPTDAAFDLAIAAGQLPPRPWNPWKQSASSSSPIL 307
            GTIW+TL SDPSFS L AAL+ T+L+  L+     A    YTLFAPDD+AI AS +FP+D P +LEVL+SFHTLA G YP S++GAHFS QL+K DP  G LSRDYYREFYA++F  GQ    TSLAGPLLNV+R  +                               L  P   +LS                      LL+EG+PVSE DITATNGVVHRLS   +A P T AGVLLNPPFPLS+AG           F A+GEL+RLAWPLVN TL  +GPLTVLAPTDAAFD+ IAAG LPPRPW     ++SSSSP L
Sbjct:  318 GTIWETLCSDPSFSLLAAALNSTSLAATLDGDGGGAGAMAYTLFAPDDDAIKASPEFPQDDPEALEVLLSFHTLAAGVYPLSLSGAHFSQQLYKVDPTSGSLSRDYYREFYADSFEDGQAGKFTSLAGPLLNVSRTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-LRPPVHSVLS----------------------LLVEGIPVSEADITATNGVVHRLSAAVMAPPDTVAGVLLNPPFPLSAAGGXXXXXXXXXGFGALGELVRLAWPLVNTTLTEEGPLTVLAPTDAAFDIVIAAGYLPPRPWYEVNSTSSSSSPSL 618          
BLAST of mRNA_H-elongata_contig12868.2110.1 vs. uniprot
Match: A0A835Z7H6_9STRA (FAS1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7H6_9STRA)

HSP 1 Score: 169 bits (428), Expect = 7.590e-44
Identity = 123/313 (39.30%), Postives = 157/313 (50.16%), Query Frame = 0
Query:    1 GTIWKTLESDPSFSKLVAALDGTALSRRLNTLDKT----ARYTLFAPDDEAIDA---SQDFPKDPTSLEVLMSFHTLAEGAYPQSVNGAHFSPQLFKADPAGGILSRDYYREFYAEAFVGGQVTSLAGPLLNVTRAPTPIDASWTFCPSLPLRARDDLEDRQATQVPETLSEPQSPMLSDIAADVAATAKAVSAAERAASSLLIEGVPVSETDITATNGVVHRLSTRAIAAPATAAGVLLN--PPFPLSSAGSFAAMGELLRLAWPLVNGTL-AGDGPLTVLAPTDAAFDLAIAAGQLPPRPWNPWKQSASSS 303
            GTIW TL + P F+KLVAAL+ T      + L  T    +  TLFAPDD A  +   S    +   ++EVL  +HTLA+G YP+S+NG HFS QLF   PAG +L+RD Y  FYA+ F G Q+ SLA P L++++                                                              A   L ++   +++ DITATNGV+HR+S      P      L    PP PL+ AG+FAA GEL+ LA  +VN TL AGD PLTV  PTDAAFD AIAAG LP RP+    QS +SS
Sbjct:   45 GTIWDTLVASPHFTKLVAALNATESGGLRDMLAGTTVPASALTLFAPDDSAYQSLLGSSGAAQSAAAVEVLYCYHTLAQGRYPRSLNGRHFSQQLFPV-PAGKVLTRDVYAGFYAQHFTGLQMPSLAVPPLSISKI-------------------------------------------------------------APGQLSVQDAHITQPDITATNGVIHRISALLHPPPTVLELALCGTAPPEPLAYAGTFAAFGELVALAGDVVNATLSAGDTPLTVFMPTDAAFDAAIAAGHLPHRPFG---QSMTSS 292          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12868.2110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXZ5_ECTSI2.120e-8755.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J734_9PHAE6.160e-8353.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7H6_9STRA7.590e-4439.30FAS1 domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 12..82
e-value: 5.1E-6
score: 26.7
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 1..221
score: 14.17
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10coord: 1..91
e-value: 1.9E-8
score: 36.6
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 2..218
NoneNo IPR availablePANTHERPTHR10900:SF77coord: 173..280
coord: 5..218
NoneNo IPR availablePANTHERPTHR10900PERIOSTIN-RELATEDcoord: 5..218
NoneNo IPR availablePANTHERPTHR10900PERIOSTIN-RELATEDcoord: 173..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12868contigH-elongata_contig12868:1286..5026 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12868.2110.1mRNA_H-elongata_contig12868.2110.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12868 1286..5026 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12868.2110.1 ID=prot_H-elongata_contig12868.2110.1|Name=mRNA_H-elongata_contig12868.2110.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=310bp
GTIWKTLESDPSFSKLVAALDGTALSRRLNTLDKTARYTLFAPDDEAIDA
SQDFPKDPTSLEVLMSFHTLAEGAYPQSVNGAHFSPQLFKADPAGGILSR
DYYREFYAEAFVGGQVTSLAGPLLNVTRAPTPIDASWTFCPSLPLRARDD
LEDRQATQVPETLSEPQSPMLSDIAADVAATAKAVSAAERAASSLLIEGV
PVSETDITATNGVVHRLSTRAIAAPATAAGVLLNPPFPLSSAGSFAAMGE
LLRLAWPLVNGTLAGDGPLTVLAPTDAAFDLAIAAGQLPPRPWNPWKQSA
SSSSPILTPD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000782FAS1_domain
IPR036378FAS1_dom_sf