prot_H-elongata_contig128516.2099.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig128516.2099.1
Unique Nameprot_H-elongata_contig128516.2099.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length176
Homology
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Match: D7FQ03_ECTSI (Elongation factor Ts, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ03_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 6.160e-69
Identity = 121/177 (68.36%), Postives = 146/177 (82.49%), Query Frame = 0
Query:    1 MISALKSRVANVAVQVLSLG-NGQGVVSGYVHGAVG-PGMGKNAALVALKLDAASAASD-ATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLLDQARESGKDPKILDNMVQGRLRKYLEDNALVRQSHMVAEGNPRVADHLGGLGEKLGGRVTVAGFSRLSVGEREP 174
            ++ A++  +      V+SLG +G+GVV+GYVHGA G PGMGKNAALVALKLD  +A  D AT + LD+SAKSLAMH+VAARPAFLDE+SAP  AL++EK LLL+QA ESGKDPK+L  MV+GRLRKYLE NAL RQ+HMVAEGNPRVADHL  LGE++GG VT+ GF+RL+VGEREP
Sbjct:  184 LVGAIRENITISRAHVVSLGGDGKGVVAGYVHGATGLPGMGKNAALVALKLDTTAAGEDTATTETLDASAKSLAMHVVAARPAFLDESSAPEAALEKEKKLLLEQAEESGKDPKVLGKMVEGRLRKYLETNALTRQAHMVAEGNPRVADHLTSLGEEVGGTVTLEGFARLAVGEREP 360          
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Match: A0A6H5KIL7_9PHAE (Elongation factor Ts, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.580e-34
Identity = 77/122 (63.11%), Postives = 93/122 (76.23%), Query Frame = 0
Query:    1 MISALKSRVANVAVQVLSLG-NGQGVVSGYVHGAVG-PGMGKNAALVALKLDAASAASDATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLLDQARESGKDPKILDNMVQGR 120
            ++ A++  +      V+SLG +G+GVV+GYVHGA G PGMGKNAALVALKL        AT + LD+SAKSLAMH+VAARPAFLDEASAP  AL+ EK LLL+QA ESGKDPK+L  MV+GR
Sbjct:  133 LVGAIRENITISRAHVVSLGGDGKGVVAGYVHGATGLPGMGKNAALVALKLGD----DTATTETLDASAKSLAMHVVAARPAFLDEASAPESALEEEKKLLLEQAEESGKDPKVLGKMVEGR 250          
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Match: A0A835Z3H1_9STRA (Elongation factor Ts, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3H1_9STRA)

HSP 1 Score: 128 bits (322), Expect = 6.690e-33
Identity = 67/146 (45.89%), Postives = 98/146 (67.12%), Query Frame = 0
Query:   26 VSGYVHGAVGPGMGKNAALVALKLDAASAASDATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLLDQARESGKDPKILDNMVQGRLRKYLEDNALVRQSHMVAEGNPRVADHLGGLGEKLGGRVTVAGFSRLSVGE 171
            V  YVHGAVG GMG+ AALVAL +D+ S   +   +V+ ++ K+LAMH VAARP FLD  + P D L +E+ ++  Q ++SGK   I+  MV+GR+ K+  +  L+ Q HM+ EGNP+V  H+  L +++GG V V GF+R ++GE
Sbjct:  175 VGAYVHGAVGEGMGRAAALVALDVDSGSGGGEHA-EVVAAAGKALAMHCVAARPRFLDRGAVPEDVLAKERGIVTGQVKDSGKPEAIVAKMVEGRMGKFFAEATLLGQPHMIEEGNPKVEAHMQALSKRIGGSVRVTGFARFAIGE 319          
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Match: UPI001904E47C (translation elongation factor Ts n=1 Tax=Rhodovibrio sodomensis TaxID=1088 RepID=UPI001904E47C)

HSP 1 Score: 113 bits (283), Expect = 2.320e-27
Identity = 66/153 (43.14%), Postives = 95/153 (62.09%), Query Frame = 0
Query:   23 QGVVSGYVHGAVGPGMGKNAALVALKLDAASAASDATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLLDQARESGKDPKILDNMVQGRLRKYLEDNALVRQSHMVAEGNPRVADHLGGLGEKLGGRVTVAGFSRLSVGEREPE 175
            QG V+GYVH  + P  GK   LVAL+   A A  D     L+++AK +AMH+ A  PA + +    P  ++REK +L+DQARESGK   I++ MV+GR+RK+ E+NAL+ Q+ +V +G  R+ D L  LG  LG  +TV G  R  +GE + +
Sbjct:  149 QGAVAGYVHNQLAPNQGKIGVLVALE---AGAGPDK----LEATAKQIAMHVAAVNPAAISQDQIDPQLVEREKQVLMDQARESGKPENIIEKMVEGRMRKFYEENALLDQTFVV-DGESRIGDVLNKLGTDLGTEITVTGMVRYQLGETQAD 293          
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Match: A0A3M1JQ90_9PROT (Elongation factor Ts n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JQ90_9PROT)

HSP 1 Score: 112 bits (280), Expect = 7.710e-27
Identity = 68/157 (43.31%), Postives = 97/157 (61.78%), Query Frame = 0
Query:   15 QVLSLGNGQGVVSGYVHGAVGPGMGKNAALVALKLDAASAASDATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLLDQARESGKDPKILDNMVQGRLRKYLEDNALVRQSHMVAEGNPRVADHLGGLGEKLGGRVTVAGFSRLSVGE 171
            +V SL    GV+S Y+H  V PG+GK   LVALK       SDA    LD+  K +AMHI A  P  LD  S  P+A++RE+++L +QAR SGK  +I++ MV+GRLRK+ E+  L++Q+ +V +G  R+A  L   G++ G  V + GF R  +GE
Sbjct:  143 RVASLSVDNGVISSYIHNDVAPGLGKIGVLVALK-------SDAPADKLDALGKQIAMHIAAMSPQSLDVDSLDPEAIERERNVLSEQARASGKPEEIIEKMVEGRLRKFYEEVVLLQQTFVV-DGETRIAKLLEVKGKEFGSPVEITGFVRFGLGE 291          
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Match: A0A3N1MD60_9PROT (Elongation factor Ts n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1MD60_9PROT)

HSP 1 Score: 112 bits (279), Expect = 1.020e-26
Identity = 68/157 (43.31%), Postives = 98/157 (62.42%), Query Frame = 0
Query:   15 QVLSLGNGQGVVSGYVHGAVGPGMGKNAALVALKLDAASAASDATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLLDQARESGKDPKILDNMVQGRLRKYLEDNALVRQSHMVAEGNPRVADHLGGLGEKLGGRVTVAGFSRLSVGE 171
            + L L   QG+V+ YVH A  PG+GK   LVAL+    SA   A ++ L    + LAMH+ AA P FLD AS    ALDRE+ +L +QAR SGK   I+D MV+GRLRK+ E+  LV Q  ++ +G  RV+  + G+ +++G  + + GF+R ++GE
Sbjct:  140 RALRLEVSQGIVASYVHNATAPGLGKIGVLVALE----SAGDTAKLEALG---RQLAMHVAAANPQFLDVASVDTTALDRERDVLREQARASGKAEAIIDKMVEGRLRKFYEETVLVEQVFVI-DGESRVSKIVEGVAKEIGQPIKLTGFARYALGE 288          
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Match: A0A2D6FZ49_9PROT (Elongation factor Ts n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6FZ49_9PROT)

HSP 1 Score: 109 bits (272), Expect = 1.100e-25
Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 0
Query:   24 GVVSGYVHGAVGPGMGKNAALVALKLDAASAASDATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLLDQARESGKDPKILDNMVQGRLRKYLEDNALVRQSHMVAEGNPRVADHLGGLGEKLGGRVTVAGFSRLSVGE 171
            GVV+ Y+H A+ PG+GK   LVAL+       SD   + L++  K LAMH+ AA P  L +A   P  L RE+S+L +QARESGK  +I++ MV GRLRKY E+  L+ Q+ ++ +G  +VA  +    ++LG  + VAGF R ++GE
Sbjct:  150 GVVATYMHNALKPGLGKIGVLVALE-------SDGDTEKLEAFGKQLAMHVAAANPRALSQADVDPAELKRERSVLSEQARESGKPEEIIEKMVDGRLRKYFEEICLLDQTFVI-DGESKVAKAVEAAAKELGAEINVAGFCRFALGE 289          
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Match: A0A2E7F9K8_9PROT (Elongation factor Ts n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7F9K8_9PROT)

HSP 1 Score: 108 bits (271), Expect = 1.550e-25
Identity = 60/148 (40.54%), Postives = 96/148 (64.86%), Query Frame = 0
Query:   24 GVVSGYVHGAVGPGMGKNAALVALKLDAASAASDATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLLDQARESGKDPKILDNMVQGRLRKYLEDNALVRQSHMVAEGNPRVADHLGGLGEKLGGRVTVAGFSRLSVGE 171
            GVVS Y+H A+ PG+GK   L+AL+       SDA  + L++  K LAMH+ AA P  +       D L+REK++L +QARESGK   I++ MV+GRLRKY E+  L+ Q++++ +G+ +V + +   G+++G  +T++ F R ++GE
Sbjct:  150 GVVSSYMHNALKPGLGKIGVLIALE-------SDADAEQLEALGKQLAMHVAAANPQAISRDDVDADDLEREKAILAEQARESGKPDDIIEKMVEGRLRKYYEEVCLLEQTYVI-DGDTKVGEVIEAAGKEVGAPITLSSFVRFALGE 289          
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Match: UPI0004865F2E (translation elongation factor Ts n=1 Tax=Rhodovibrio salinarum TaxID=1087 RepID=UPI0004865F2E)

HSP 1 Score: 108 bits (270), Expect = 1.870e-25
Identity = 65/153 (42.48%), Postives = 94/153 (61.44%), Query Frame = 0
Query:   23 QGVVSGYVHGAVGPGMGKNAALVALKLDAASAASDATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLLDQARESGKDPKILDNMVQGRLRKYLEDNALVRQSHMVAEGNPRVADHLGGLGEKLGGRVTVAGFSRLSVGEREPE 175
            QG V+GYVH  + P  GK   L+AL+   A A  D     L+++AK +AMH+ A  P  + +    P  ++REK +L +QARESGK   I++ MVQGR+RK+ E+NAL+ Q+ +V +G  RV D L  LG+ LG  + V G +R  +GE + E
Sbjct:  149 QGAVAGYVHNQLAPNQGKIGVLIALE---AGAGPDK----LEATAKQIAMHVAAVNPNAITQDDVDPALVEREKKVLEEQARESGKPENIIEKMVQGRMRKFYEENALLDQTFVV-DGESRVGDVLDKLGKDLGTEIKVTGMARYQLGETQAE 293          
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Match: UPI00115E564D (translation elongation factor Ts n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115E564D)

HSP 1 Score: 108 bits (270), Expect = 2.130e-25
Identity = 64/157 (40.76%), Postives = 101/157 (64.33%), Query Frame = 0
Query:   15 QVLSLGNGQGVVSGYVHGAVGPGMGKNAALVALKLDAASAASDATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLLDQARESGKDPKILDNMVQGRLRKYLEDNALVRQSHMVAEGNPRVADHLGGLGEKLGGRVTVAGFSRLSVGE 171
            QVL +G  QGV++ Y+H AV PG+GK   LVAL+    S+  +A ++ +    K +AMHI AA+P FLD +S   DAL+RE+ +L +QA+ SGK  +++  MV+GRLRKY E+  L+ Q  ++ +G  R+   +    +++G  V + GF+R+ +GE
Sbjct:  142 QVLEVG--QGVIASYIHNAVAPGLGKIGVLVALE----SSGDEAKLQEIG---KQIAMHIAAAQPQFLDTSSVDQDALNRERDVLTEQAKASGKPEEVIAKMVEGRLRKYYEEVVLLEQVFVI-DGETRIKKVIENAAKEVGAPVAITGFARVVLGE 288          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig128516.2099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ03_ECTSI6.160e-6968.36Elongation factor Ts, mitochondrial n=1 Tax=Ectoca... [more]
A0A6H5KIL7_9PHAE1.580e-3463.11Elongation factor Ts, mitochondrial n=1 Tax=Ectoca... [more]
A0A835Z3H1_9STRA6.690e-3345.89Elongation factor Ts, mitochondrial n=1 Tax=Tribon... [more]
UPI001904E47C2.320e-2743.14translation elongation factor Ts n=1 Tax=Rhodovibr... [more]
A0A3M1JQ90_9PROT7.710e-2743.31Elongation factor Ts n=1 Tax=Alphaproteobacteria b... [more]
A0A3N1MD60_9PROT1.020e-2643.31Elongation factor Ts n=1 Tax=Stella humosa TaxID=9... [more]
A0A2D6FZ49_9PROT1.100e-2543.24Elongation factor Ts n=1 Tax=Rhodospirillaceae bac... [more]
A0A2E7F9K8_9PROT1.550e-2540.54Elongation factor Ts n=1 Tax=Rhodospirillaceae bac... [more]
UPI0004865F2E1.870e-2542.48translation elongation factor Ts n=1 Tax=Rhodovibr... [more]
UPI00115E564D2.130e-2540.76translation elongation factor Ts n=1 Tax=Telmatosp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.286.20coord: 84..128
e-value: 1.2E-29
score: 104.8
NoneNo IPR availablePANTHERPTHR11741:SF0ELONGATION FACTOR TS, MITOCHONDRIALcoord: 19..171
IPR014039Translation elongation factor EFTs/EF1B, dimerisationPFAMPF00889EF_TScoord: 22..171
e-value: 6.8E-25
score: 87.9
IPR036402Elongation factor Ts, dimerisation domain superfamilyGENE3D3.30.479.20coord: 24..170
e-value: 1.2E-29
score: 104.8
IPR036402Elongation factor Ts, dimerisation domain superfamilySUPERFAMILY54713Elongation factor Ts (EF-Ts), dimerisation domaincoord: 24..172
IPR001816Translation elongation factor EFTs/EF1BPANTHERPTHR11741ELONGATION FACTOR TScoord: 19..171
IPR001816Translation elongation factor EFTs/EF1BHAMAPMF_00050EF_Tscoord: 1..175
score: 19.967

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig128516contigH-elongata_contig128516:255..1470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig128516.2099.1mRNA_H-elongata_contig128516.2099.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig128516 255..1470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig128516.2099.1 ID=prot_H-elongata_contig128516.2099.1|Name=mRNA_H-elongata_contig128516.2099.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp
MISALKSRVANVAVQVLSLGNGQGVVSGYVHGAVGPGMGKNAALVALKLD
AASAASDATIKVLDSSAKSLAMHIVAARPAFLDEASAPPDALDREKSLLL
DQARESGKDPKILDNMVQGRLRKYLEDNALVRQSHMVAEGNPRVADHLGG
LGEKLGGRVTVAGFSRLSVGEREPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014039Transl_elong_EFTs/EF1B_dimer
IPR036402EF-Ts_dimer_sf
IPR001816Transl_elong_EFTs/EF1B