prot_H-elongata_contig12834.2088.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12834.2088.1
Unique Nameprot_H-elongata_contig12834.2088.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length160
Homology
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Match: A0A0G4IT20_PLABS (DUF4395 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IT20_PLABS)

HSP 1 Score: 102 bits (255), Expect = 4.000e-24
Identity = 65/158 (41.14%), Postives = 85/158 (53.80%), Query Frame = 0
Query:    7 FTFPSPVNTSESRLHAFLVVVXXXXAAALSIISHFPWIWLYILYGYAARSLCGPRIDPQVRSG-FTALPVTITITISIR--FIPGTPKRFAQMLGLVFVLSSTILA-FLELYTAMLVVSGCMFAAASLWAFFGWCIACDVYMAFVRCHMLPPSVCEEC 160
            F FP+PVN  E+R H+  V +              PW+  YILYG+AAR L GPRIDPQ     F   P+   +    R  F P  PKRFAQ +GL+F L+  IL   L L    ++V GC+  AA L A  G+C AC V+   +R  ++P +VCE C
Sbjct:   38 FGFPNPVNQLEARSHSGCVTLLTILHIIFLYEFAVPWLGWYILYGFAARFLSGPRIDPQAYFVIFVVRPLLEDVLQVARSEFHPSPPKRFAQFVGLLFALAGNILYNVLHLTVPSIIVWGCLVVAAGLLALTGFCAACFVFSVGMRLGLVPKTVCESC 195          
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Match: UPI001B2F5C2A (DUF4395 domain-containing protein n=1 Tax=Solirubrobacteraceae bacterium TaxID=2586742 RepID=UPI001B2F5C2A)

HSP 1 Score: 95.9 bits (237), Expect = 4.150e-22
Identity = 61/154 (39.61%), Postives = 85/154 (55.19%), Query Frame = 0
Query:    8 TFPSPVNTSESRLHAFLVVVXXXXAAALSIISHFPWIWLYILYGYAARSLCGPRIDPQVRSGFTALPVTITITISIRFIPGTPKRFAQMLGLVFVLSSTILAF-LELYTAMLVVSGCMFAAASLWAFFGWCIACDVYMAFVRCHMLPPSVCEEC 160
            +FP+PVN   +R  A LVV+     + L+I +  PW+ + +  G+  R L GPR DP    G  A  V        R +PG PKRFAQ +G VF   + +L F L+  TA   V G +  AASL AF G+C+ C V+   +R  ++P SVCE+C
Sbjct:    6 SFPNPVNELAARSVAGLVVL----TSVLAIAAQLPWLSIVLAVGFLLRVLWGPRFDPF---GQLATKVIAPRLGHARLVPGPPKRFAQGMGTVFTTVAALLFFALDATTAGYAVLGVLVVAASLEAFAGFCLGCQVFALLMRAGVIPESVCEDC 152          
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Match: UPI001D10817C (DUF4395 domain-containing protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D10817C)

HSP 1 Score: 92.4 bits (228), Expect = 1.540e-20
Identity = 55/154 (35.71%), Postives = 83/154 (53.90%), Query Frame = 0
Query:    7 FTFPSPVNTSESRLHAFLVVVXXXXAAALSIISHFPWIWLYILYGYAARSLCGPRIDPQVRSGFTALPVTITITISIRFIPGTPKRFAQMLGLVFVLSSTILAFLELYTAMLVVSGCMFAAASLWAFFGWCIACDVYMAFVRCHMLPPSVCEEC 160
            F+FP+PVN   +R  A  VVV     A L     + W+ + + YG+ AR L GP + P     F    V   +    +++PG PKRFAQ +G+VF ++S++L       A  +V   +  AA L A FG+C+ C ++   +R  ++P SVCEEC
Sbjct:   19 FSFPNPVNDVAARTVATGVVVMALAVAVLG----WGWVLVPLTYGFVARVLTGPTLSPL--GTFATRVVASRLPQHAKYVPGPPKRFAQAIGVVFSVTSSVLWLAGATGASRIVVALLAGAAFLEAAFGFCLGCRIFAVLMRAGVIPESVCEEC 166          
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Match: A0A0G4ISP6_PLABS (DUF4395 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ISP6_PLABS)

HSP 1 Score: 92.8 bits (229), Expect = 2.970e-20
Identity = 58/159 (36.48%), Postives = 85/159 (53.46%), Query Frame = 0
Query:    9 FPSPVNTSESRLHAFLVVVXXXXAAALSI---ISHFPWIWLYILYGYAARSLCGPRIDPQVRSGFTALPVTITITISIR---FIPGTPKRFAQMLGLVFVLSSTILAF-LELYTAMLVVSGCMFAAASLWAFFGWCIACDVYMAFVRCHMLPPSVCEEC 160
            FP+PVN  E+RLH+  V         L     +S   W   +ILYG+ AR + GPR DPQ       L   +   + +    F P  PKRFAQ +G++F L++T++     L     +V GC+ AAA++ A FG+C AC V+   V+  ++PP+ CE C
Sbjct:   40 FPNPVNELEARLHSACVTALTVAHIVLLYEYDVSALGW---FILYGFTARVVSGPRFDPQAYLVVLVLRPLLEDVLQVAKSSFKPSPPKRFAQFVGVLFALTATVIDHGFGLTFVSAIVWGCLAAAAAVLALFGFCAACYVFSLAVQAGIVPPAYCESC 195          
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Match: A0A7Y3KTX4_9ACTN (DUF4395 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7Y3KTX4_9ACTN)

HSP 1 Score: 89.4 bits (220), Expect = 1.640e-19
Identity = 53/158 (33.54%), Postives = 85/158 (53.80%), Query Frame = 0
Query:    3 VREFFTFPSPVNTSESRLHAFLVVVXXXXAAALSIISHFPWIWLYILYGYAARSLCGPRIDPQVRSGFTALPVTITITISIRFIPGTPKRFAQMLGLVFVLSSTILAFLELYTAMLVVSGCMFAAASLWAFFGWCIACDVYMAFVRCHMLPPSVCEEC 160
            ++ FF+FP+PVN + +R  A  VV        L++++   W+ + + YG+ AR L GP I P  +  F        I    +F+PG PKRFAQ +G VF LS+ ++     ++    +   +  AASL  F G+C+ C ++   +R  ++P SVC EC
Sbjct:    1 MKNFFSFPNPVNDASARTVALGVVTM----TVLALLTRSAWLLIPLTYGFVARLLAGPTISPLGQ--FAVRVAGPRIDAWQKFVPGPPKRFAQGIGAVFSLSTCVVWLFAGWSTAQWILVPLVVAASLEGFLGFCLGCTIFGWLIRIGLVPESVCAEC 152          
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Match: UPI001964EEB7 (DUF4395 family protein n=1 Tax=Glycomyces sp. YM15 TaxID=2800446 RepID=UPI001964EEB7)

HSP 1 Score: 85.9 bits (211), Expect = 3.940e-18
Identity = 57/159 (35.85%), Postives = 81/159 (50.94%), Query Frame = 0
Query:    3 VREFFTFPSPVNTSESRLHAFLVVVXXXXAAALSIISHFPWIWLYILYGYAARSLCGPRIDPQVRSGFTALPVTITITISIRFIPGTPKRFAQMLGLVF-VLSSTILAFLELYTAMLVVSGCMFAAASLWAFFGWCIACDVYMAFVRCHMLPPSVCEEC 160
            +R  F+FP+PVN   +RL A  VV     A A  +     W+   I  G+ AR   GP +   V        VT  +  + + +PG PKRFAQ +G VF V ++ +L   +L  A   V G +  AASL AFF +C+ C ++    R  ++P SVCE C
Sbjct:    1 MRRLFSFPNPVNEVSARLVAGGVVAMSAAALAFQL----EWLVAVIALGFIARVASGPSLS--VLGQLVTRVVTPRLPAAPKMVPGPPKRFAQGIGAVFSVTAALLLLVFDLPVAGWFVLGALTVAASLEAFFAFCLGCKIFALLTRVGLIPDSVCEAC 153          
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Match: A0A2E6WTV4_9CHLR (MFS transporter permease n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E6WTV4_9CHLR)

HSP 1 Score: 84.7 bits (208), Expect = 8.290e-18
Identity = 51/163 (31.29%), Postives = 89/163 (54.60%), Query Frame = 0
Query:    3 VREFFTFPSPVNTSESRLHAFLVVVXXXXAAALSIISHFPWIWLYILYGYAARSLCGPRIDPQVRSGFTALPVTITITISI-RFIPGTPKRFAQMLGLVFVLSSTILAFLELYTAMLVVSGCMFAAASLWAFF----GWCIACDVYMAFVRCHMLPPSVCEEC 160
            +     FP+PVN   +R  AF+V+V     + +++I + PW+   +LYG+ AR L GP++ P    G  +  + +   I   + +PG PKRFAQ++GL+F  S+ I   + +Y    V++  +    S++AF     G+C  C V+   ++  ++P S+CE C
Sbjct:    1 MNNLLNFPNPVNEYAARTVAFMVLVL----SIMTLIFNSPWLSAILLYGFLARVLTGPKLSPM---GLLSTKIIVPYLIKKEKLVPGPPKRFAQLIGLIF--STAIFVSIAIYQIN-VLANTLLIILSIFAFLESILGFCAGCLVFKYLMKFKLIPDSICESC 153          
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Match: A0A6I3XAJ7_9ACTN (DUF4395 family protein n=4 Tax=root TaxID=1 RepID=A0A6I3XAJ7_9ACTN)

HSP 1 Score: 82.8 bits (203), Expect = 5.180e-17
Identity = 48/158 (30.38%), Postives = 87/158 (55.06%), Query Frame = 0
Query:    3 VREFFTFPSPVNTSESRLHAFLVVVXXXXAAALSIISHFPWIWLYILYGYAARSLCGPRIDPQVRSGFTALPVTITITISIRFIPGTPKRFAQMLGLVFVLSSTILAFLELYTAMLVVSGCMFAAASLWAFFGWCIACDVYMAFVRCHMLPPSVCEEC 160
            +++FF+FP+PVN + +R  A  VV      A  +++ + PWI + + YG+ AR   GP++ P     F        ++   + + G PKRFAQ +GL F +S++I+     ++A   +   + AAA+L  F G+C+ C ++   ++  ++P  VC +C
Sbjct:    1 MKQFFSFPNPVNDAAARTVALGVVAM----ATTALVFNQPWILIPLTYGFLARVAAGPKLSPL--GTFAVKIAAPRLSAWEKLVAGPPKRFAQCVGLAFSVSASIVYLTVGWSAARWILLPLVAAAALEGFVGYCLGCAMFGQLMKIGLIPEEVCADC 152          
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Match: UPI001F4AB76B (DUF4395 domain-containing protein n=1 Tax=Glycomyces sp. L485 TaxID=2909235 RepID=UPI001F4AB76B)

HSP 1 Score: 82.0 bits (201), Expect = 1.080e-16
Identity = 53/155 (34.19%), Postives = 81/155 (52.26%), Query Frame = 0
Query:    7 FTFPSPVNTSESRLHAFLVVVXXXXAAALSIISHFPWIWLYILYGYAARSLCGPRIDPQVRSGFTALPVTITITISIRFIPGTPKRFAQMLGLVFVLSSTILAF-LELYTAMLVVSGCMFAAASLWAFFGWCIACDVYMAFVRCHMLPPSVCEEC 160
            F FP+PVN   +RL A  VV+     + ++I+    W+   I  G+ AR   GP     V        +T  + ++ + +PG PKRFAQ +G VF L+ST+L F      A  +V G +  AA+L A F +C+ C ++    R  ++P +VCE C
Sbjct:    5 FQFPNPVNEVSARLVAAGVVLM----SVIAIVFRLEWLVAIIALGFIARVAAGPTFS--VLGQLVTKIITPRLPVAAKPVPGPPKRFAQGIGAVFSLASTVLLFGFGADLAAWIVLGALTIAAALEAAFAFCLGCKMFALLTRMGLIPEAVCEAC 153          
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Match: A0A538LWA1_9ACTN (DUF4395 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538LWA1_9ACTN)

HSP 1 Score: 82.8 bits (203), Expect = 1.540e-16
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 0
Query:    1 MTVREFFTFPSPVNTSESRLHAFLVVVXXXXAAALSIISHFPWIWLYILYGYAARSLCGPRIDPQVRSGFTALPVTITITISIRFIPGTPKRFAQMLGLVFVLSSTILAF-LELYTAMLVVSGCMFAAASLWAFFGWCIACDVYMAFVRCHMLPPSVCEEC 160
            M VR+F +FP+PVN   +R  AF+V+V     +A+ + +   W+++ + YG+ AR L GPR+ P    G  A  V      + + +PG PKRFAQ +G        ++AF L  +     +   M  AA L +    C+ C+V+   +R  ++P  VC EC
Sbjct:    1 MAVRDFLSFPNPVNEKAARTVAFVVMV----VSAVGLATSTYWLFVPLAYGFVARVLAGPRLSPL---GRLASAVVAPRLGAPKPVPGPPKRFAQAIGATLSTLGVVVAFGLGAHGVGDALFALMIVAAGLESLAAVCLGCEVFALLMRAGLVPERVCLEC 154          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12834.2088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0G4IT20_PLABS4.000e-2441.14DUF4395 domain-containing protein n=1 Tax=Plasmodi... [more]
UPI001B2F5C2A4.150e-2239.61DUF4395 domain-containing protein n=1 Tax=Solirubr... [more]
UPI001D10817C1.540e-2035.71DUF4395 domain-containing protein n=1 Tax=Aquihabi... [more]
A0A0G4ISP6_PLABS2.970e-2036.48DUF4395 domain-containing protein n=1 Tax=Plasmodi... [more]
A0A7Y3KTX4_9ACTN1.640e-1933.54DUF4395 domain-containing protein n=1 Tax=Acidimic... [more]
UPI001964EEB73.940e-1835.85DUF4395 family protein n=1 Tax=Glycomyces sp. YM15... [more]
A0A2E6WTV4_9CHLR8.290e-1831.29MFS transporter permease n=1 Tax=Chloroflexi bacte... [more]
A0A6I3XAJ7_9ACTN5.180e-1730.38DUF4395 family protein n=4 Tax=root TaxID=1 RepID=... [more]
UPI001F4AB76B1.080e-1634.19DUF4395 domain-containing protein n=1 Tax=Glycomyc... [more]
A0A538LWA1_9ACTN1.540e-1632.92DUF4395 domain-containing protein n=1 Tax=Actinomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025508Domain of unknown function DUF4395PFAMPF14340DUF4395coord: 13..148
e-value: 3.0E-20
score: 72.9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..160
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 22..44
NoneNo IPR availableTMHMMTMhelixcoord: 64..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12834contigH-elongata_contig12834:6370..7708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12834.2088.1mRNA_H-elongata_contig12834.2088.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12834 6370..7708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12834.2088.1 ID=prot_H-elongata_contig12834.2088.1|Name=mRNA_H-elongata_contig12834.2088.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=160bp
MTVREFFTFPSPVNTSESRLHAFLVVVVIIVAAALSIISHFPWIWLYILY
GYAARSLCGPRIDPQVRSGFTALPVTITITISIRFIPGTPKRFAQMLGLV
FVLSSTILAFLELYTAMLVVSGCMFAAASLWAFFGWCIACDVYMAFVRCH
MLPPSVCEEC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025508DUF4395