mRNA_H-elongata_contig127775.2045.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE) HSP 1 Score: 121 bits (303), Expect = 5.100e-30 Identity = 69/171 (40.35%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 13 GVMLLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAIKNEIVNKADKDDIAIECISARLLKARVSIKYNF-ITFGVAYAPTE--EATEG----EKTKYIAALNSTVSSVPGRKYVFILTDANARVGKGGERGGDAESKVLGAYGRDVLNENGKLLLSVAED 504
G ++GL ET+R+G + G + +SG G K +G HGVG+AIK + ++ +ECIS RL+K R+ I +TF V YAPTE T G K + AL++ + V R ++ +L DANAR G+ RGG ++KVLGAYGRD++N NG+ L +A D
Sbjct: 11 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGR--RRGGCCDAKVLGAYGRDIMNNNGERLFGLASD 179
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE) HSP 1 Score: 117 bits (294), Expect = 8.030e-30 Identity = 68/168 (40.48%), Postives = 99/168 (58.93%), Query Frame = 1
Query: 22 LLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAIKNEIVNKADKDDIAIECISARLLKARVSIKYNF-ITFGVAYAPTEEA--TEG----EKTKYIAALNSTVSSVPGRKYVFILTDANARVGKGGERGGDAESKVLGAYGRDVLNENGKLLLSVAED 504
++GL ET+R G +T G + +SG G K +G HGVG+AIK + + + +ECIS RL+K R+ I +TF V YAPTE A T G K + AL++ + V R ++ +L DANAR G+ R G ++K++GAYGRD++N NG+ LL +A D
Sbjct: 14 VIGLQETRRAGQGAITHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGR--RRDGCCDAKIMGAYGRDIMNNNGERLLGLAAD 179
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Match: A0A6H5JII6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII6_9PHAE) HSP 1 Score: 120 bits (300), Expect = 5.460e-29 Identity = 67/171 (39.18%), Postives = 100/171 (58.48%), Query Frame = 1
Query: 13 GVMLLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAIKNEIVNKADKDDIAIECISARLLKARVSIKYNF-ITFGVAYAPTE--EATEG----EKTKYIAALNSTVSSVPGRKYVFILTDANARVGKGGERGGDAESKVLGAYGRDVLNENGKLLLSVAED 504
G ++GL ET+R+G + G+ + +SG G K +G HGVG+AIK + ++ +ECIS RL+K R+ I +TF V YAPTE T G K + AL++ + V R ++ +L DANAR G+ R G ++K++GAYGRD++N NG+ LL +A D
Sbjct: 11 GCDVIGLQETRREGQGSIAHDGDVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGR--RRDGCCDAKIMGAYGRDIMNNNGERLLGLASD 179
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Match: A0A6H5KQ63_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ63_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.800e-28 Identity = 68/171 (39.77%), Postives = 98/171 (57.31%), Query Frame = 1
Query: 13 GVMLLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAIKNEIVNKADKDDIAIECISARLLKARVSIKYNF-ITFGVAYAPTE--EATEG----EKTKYIAALNSTVSSVPGRKYVFILTDANARVGKGGERGGDAESKVLGAYGRDVLNENGKLLLSVAED 504
G ++GL ET+R+G + G +SG G KG G HGVG+AIK + ++ +ECIS RL+K R+ I +TF V YAPTE T G K + AL++ + V R ++ +L DANAR G+ R G ++K++GAYGRD++N NG+ LL +A D
Sbjct: 11 GCDVIGLQETRREGQGSIAHDGYVFIWSGARAGTKGKWGVHGVGIAIKEAMWQSVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGR--RRDGCCDAKIMGAYGRDIMNNNGERLLGLASD 179
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Match: A0A6H5K3Q1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q1_9PHAE) HSP 1 Score: 119 bits (297), Expect = 4.540e-28 Identity = 68/171 (39.77%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 13 GVMLLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAIKNEIVNKADKDDIAIECISARLLKARVSIKYNF-ITFGVAYAPTE--EATEG----EKTKYIAALNSTVSSVPGRKYVFILTDANARVGKGGERGGDAESKVLGAYGRDVLNENGKLLLSVAED 504
G ++GL ET+R G + G + +SG G K +G HGVG+AIK + ++ +ECIS RL+K R+ I +TF V YAPTE TEG K + AL++ + V R ++ +L DANAR G+ R G ++K++GAYGRD++N NG+ LL +A D
Sbjct: 208 GCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFLVGYAPTETVRTTEGCDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGR--RRKGCCDAKIMGAYGRDIMNNNGERLLGLASD 376
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Match: A0A6H5JUT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT2_9PHAE) HSP 1 Score: 116 bits (291), Expect = 5.440e-28 Identity = 67/171 (39.18%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 13 GVMLLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAIKNEIVNKADKDDIAIECISARLLKARVSIKYNF-ITFGVAYAPTE--EATEG----EKTKYIAALNSTVSSVPGRKYVFILTDANARVGKGGERGGDAESKVLGAYGRDVLNENGKLLLSVAED 504
G ++ L ET+R+G + G + +SG G K +G HGVG+AIK + ++ +ECIS RL+KAR+ I +TF V YAPTE T G K + AL++ + V R ++ +L DANAR G+ R G ++K++GAYGRD++N NG+ LL +A D
Sbjct: 11 GCDVIELQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKARLQIGRTCRVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVYSRDHLVVLMDANARTGR--RREGCCDAKIMGAYGRDIMNNNGERLLGLASD 179
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE) HSP 1 Score: 119 bits (297), Expect = 6.060e-28 Identity = 67/171 (39.18%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 13 GVMLLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAIKNEIVNKADKDDIAIECISARLLKARVSIKYNF-ITFGVAYAPTE--EATEG----EKTKYIAALNSTVSSVPGRKYVFILTDANARVGKGGERGGDAESKVLGAYGRDVLNENGKLLLSVAED 504
G ++GL ET+R+G + G + +SG G K +G HGVG+AIK + ++ +ECIS RL+K R+ I +TF V YAPTE T G K + AL++ + V R ++ +L DANAR G+ R G ++K++GAYGRD++N NG+ LL +A D
Sbjct: 11 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGR--RRDGCCDAKIMGAYGRDIMNNNGERLLGLASD 179
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE) HSP 1 Score: 118 bits (296), Expect = 8.460e-28 Identity = 67/171 (39.18%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 13 GVMLLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAIKNEIVNKADKDDIAIECISARLLKARVSIKYNF-ITFGVAYAPTE--EATEG----EKTKYIAALNSTVSSVPGRKYVFILTDANARVGKGGERGGDAESKVLGAYGRDVLNENGKLLLSVAED 504
G ++GL ET+R+G + G + +SG G K +G HGVG+AIK + ++ +ECIS RL+K R+ I +TF V YAPTE T G K + AL++ + V R ++ +L DANAR G+ R G ++K++GAYGRD++N NG+ LL +A D
Sbjct: 690 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGR--RRDGCCDAKIMGAYGRDIMNNNGERLLGLASD 858
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Match: A0A6H5JMM5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM5_9PHAE) HSP 1 Score: 112 bits (280), Expect = 9.200e-28 Identity = 65/168 (38.69%), Postives = 95/168 (56.55%), Query Frame = 1
Query: 22 LLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAIKNEIVNKADKDDIAIECISARLLKARVSIKYNF-ITFGVAYAPTE--EATEG----EKTKYIAALNSTVSSVPGRKYVFILTDANARVGKGGERGGDAESKVLGAYGRDVLNENGKLLLSVAED 504
++GL ET+R+G + G + +SG G K +G HGVG AIK + ++ +ECIS RL+K R+ I +TF V YAPTE T G K + AL++ + V R ++ +L DANAR G+ R G + K++GAYGRD++ NG+ LL +A D
Sbjct: 14 VIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGRAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGR--RRVGCCDGKMMGAYGRDIMTNNGERLLGLASD 179
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE) HSP 1 Score: 114 bits (285), Expect = 1.030e-27 Identity = 66/171 (38.60%), Postives = 98/171 (57.31%), Query Frame = 1
Query: 13 GVMLLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAIKNEIVNKADKDDIAIECISARLLKARVSIKYNF-ITFGVAYAPTE--EATEG----EKTKYIAALNSTVSSVPGRKYVFILTDANARVGKGGERGGDAESKVLGAYGRDVLNENGKLLLSVAED 504
G ++GL ET+R+G + G + +SG G K +G HGVG+AIK I ++ +ECIS RL+K R+ I +TF V YAPTE +T G K + AL++ + V R ++ +L ANAR G+ R G ++K++GA GRD++N NG+ LL +A D
Sbjct: 42 GCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMGANARTGR--RRDGCCDAKIMGANGRDIMNNNGERLLELASD 210 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig127775.2045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig127775.2045.1 >prot_H-elongata_contig127775.2045.1 ID=prot_H-elongata_contig127775.2045.1|Name=mRNA_H-elongata_contig127775.2045.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp MLQEGVMLLGLSETKRDGHSEVTASGNRVYFSGDCTGVKGNKGQHGVGLAback to top mRNA from alignment at H-elongata_contig127775:353..856+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig127775.2045.1 ID=mRNA_H-elongata_contig127775.2045.1|Name=mRNA_H-elongata_contig127775.2045.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=504bp|location=Sequence derived from alignment at H-elongata_contig127775:353..856+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig127775:353..856+ >mRNA_H-elongata_contig127775.2045.1 ID=mRNA_H-elongata_contig127775.2045.1|Name=mRNA_H-elongata_contig127775.2045.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1008bp|location=Sequence derived from alignment at H-elongata_contig127775:353..856+ (Himanthalia elongata Himel1 dioecious)back to top |