mRNA_H-elongata_contig12717.2016.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12717.2016.1
Unique NamemRNA_H-elongata_contig12717.2016.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Match: A0A6H5JPB9_9PHAE (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPB9_9PHAE)

HSP 1 Score: 733 bits (1893), Expect = 7.540e-255
Identity = 380/477 (79.66%), Postives = 417/477 (87.42%), Query Frame = 3 
Query:  633 MINSRARTVPSSPLARVFGFGQLAAGLAMGTVAEAMRQSVAGG-------EGGSTGEKTGGRQGVNVKNYVVNDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLEKSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDYEKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVDQIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMTLIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQSMMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLTPPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRYVFG 2042
            M NSRARTVPSSPLARVFGFGQLAAGLAMGTVAEA+RQSV GG       EGG            +VK YV +DANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGAD+MPL QLHRQLEK+ G DWR+KL++FDETPIAAASIGQ       VHRA+L DGT+VAMKIQYPGVADSVESDL+NLQ LV+LTNILPPGLYI+EII+  V REEL EECDYE+EAA+QERF+KLV SDE LRKW SVP VV EL+SKEVLTTHLAPGVPVDQ++ +PQEVR+HVARLMLRCT+ ELF+WRFMQTDPNWGNFLFDR TGKM+LIDFGACREY+K FVD Y RLVW+AAN+DE  I+ VSQ+LKFLTGDE+Q MM AH++AGLVVGEPFIDR   GE FDF+GSNITARLSQHGDTFMKHRLTPPP+EAYSLHRKLAGAFLMNIKLKAVIPCRDILE+VHDRY +G
Sbjct:  218 MSNSRARTVPSSPLARVFGFGQLAAGLAMGTVAEAVRQSVRGGGGPGDSAEGGXXXXXXXXXXXGSVKQYVASDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADVMPLKQLHRQLEKNLGMDWRSKLAAFDETPIAAASIGQ-------VHRAKLPDGTDVAMKIQYPGVADSVESDLKNLQRLVQLTNILPPGLYIEEIIR--VAREELGEECDYEREAANQERFKKLVGSDESLRKWVSVPTVVHELVSKEVLTTHLAPGVPVDQVLPMPQEVRNHVARLMLRCTINELFDWRFMQTDPNWGNFLFDRETGKMSLIDFGACREYRKGFVDDYLRLVWSAANQDEAEIMRVSQELKFLTGDETQMMMKAHLQAGLVVGEPFIDRD--GEAFDFHGSNITARLSQHGDTFMKHRLTPPPQEAYSLHRKLAGAFLMNIKLKAVIPCRDILEDVHDRYTYG 683
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BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Match: A0A835YMK7_9STRA (Protein required for ubiquinone biosynthesis and for respiratory growth n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK7_9STRA)

HSP 1 Score: 551 bits (1421), Expect = 2.240e-183
Identity = 293/475 (61.68%), Postives = 345/475 (72.63%), Query Frame = 3 
Query:  657 VPSSPLARVFGFGQLAAGLAMGTVAEAMRQSVAGGEGGSTGEKTGGRQGVNVKNYVVNDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLEKSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDYEKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVDQIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMTLIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQSMMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLTPPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRYVFG*QTMFVPGMLNSA 2081
            VPSSPLARV GFGQLAAGLA+GTVAEA+RQ V    G             +VK  + +DANAERLAE LCRMRGAALKLGQMLSIQDE VIPP LAKAL+RVR GAD MP  QLH QL  + G  WR +L+ FDE P+AAASIGQ       VHRA+LLDGTEVAMKIQYPGVADS+ESDL NL+ LV +TN+LPPGL+++EI++  V REEL  ECDY  EAA+QERFR LV+ D  L K  SVP VV EL++ +VLTTH+  GV +D++  + Q+ R+ VARL+LR T++ELF WRFMQTDPNWGN+L+D     + LIDFGACR Y K FVD Y +LVWAAAN D DT+  +S+ L+FLTG E+  M+ AH  AGLVVGEPF         FDF  S++TARL +HG+ F +HRLTPPPREAYSLHRKLAGAFL  IKL AVI CRDILEE +  Y F        G+   A
Sbjct:  240 VPSSPLARVLGFGQLAAGLAVGTVAEALRQGVGARGGXXXXXXXXXXARASVKQLMASDANAERLAEALCRMRGAALKLGQMLSIQDEGVIPPQLAKALERVRAGADTMPAKQLHAQLRAALGDGWRARLAEFDEAPLAAASIGQ-------VHRAKLLDGTEVAMKIQYPGVADSIESDLSNLERLVTMTNLLPPGLFVEEIVE--VAREELKLECDYTLEAANQERFRALVQQDPELSKHVSVPAVVHELVTPQVLTTHMVRGVHIDRVAALGQDARNAVARLLLRLTLRELFAWRFMQTDPNWGNYLYDADAATLHLIDFGACRAYDKRFVDAYLKLVWAAANGDADTLTRISRDLEFLTGAETPEMLAAHAGAGLVVGEPFARDAP----FDFAASDLTARLGRHGEVFARHRLTPPPREAYSLHRKLAGAFLACIKLGAVINCRDILEETYRSYQFDDDASATAGLSGKA 701
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BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Match: A0A4D9DI78_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DI78_9STRA)

HSP 1 Score: 519 bits (1337), Expect = 7.890e-172
Identity = 273/466 (58.58%), Postives = 339/466 (72.75%), Query Frame = 3 
Query:  645 RARTVPSSPLARVFGFGQLAAGLAMGTVAEAMRQSV---AGGEGGSTGEKTGGRQGVNVKNYVVNDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLEKSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDYEKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVDQIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMTLIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQSMMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLTPPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRY 2033
            + R+VP+SPL+RV GFG LAA LA+    EA+R+ +   A  +  S     G R        +++D +AE +AETLC+MRGAALKLGQMLS+QDE ++P  L KAL+RVRQGAD+MP  QLH QLE   G  WR +  +F E P+AAASIGQ       VHRAR +DG +VA+K+QYPGV DS+ESDL+NL+ LV   N+LPPGLY+DEI+   V REEL  ECDY+ EA +QERF+ LVESD  L    SVP VV +L S++VLT+    G PVD+++ + Q+ R+ VARL+L  T++ELF+WRFMQTDPNW NFL+D +TGK+ L+DFGA R Y+K FVD Y  LVWAAANRD   ++  S +L FLTGDES  M+ AH  AGLVVGEPF++     E FDF+GSN+T R+S HG TFM HRLTPPPREAYSLHRKLAGAFL+ IKLKAVIPCRD+LEE H  Y
Sbjct:  173 KERSVPASPLSRVLGFGSLAARLAVTGAYEAVRRQIVMTASDQEASASSSAGARP-----RTLLSDRSAEHIAETLCKMRGAALKLGQMLSLQDEGILPEPLTKALERVRQGADVMPRAQLHAQLEAELGAGWRARFRTFGEKPVAAASIGQ-------VHRARTIDGRDVAVKVQYPGVGDSIESDLKNLKRLVTYLNVLPPGLYVDEIL--DVAREELILECDYKLEAQNQERFKLLVESDPALIPHMSVPGVVSDLSSRQVLTSEWMTGEPVDRVVALDQDTRNRVARLILLLTLRELFDWRFMQTDPNWSNFLYDGSTGKLALLDFGASRSYQKAFVDKYLELVWAAANRDTSKLMIASHQLGFLTGDESTQMLRAHESAGLVVGEPFVNH----EPFDFHGSNMTVRISHHGKTFMNHRLTPPPREAYSLHRKLAGAFLLCIKLKAVIPCRDLLEETHKMY 620
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BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Match: A0A8K1CGC3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGC3_PYTOL)

HSP 1 Score: 516 bits (1330), Expect = 1.630e-170
Identity = 275/461 (59.65%), Postives = 335/461 (72.67%), Query Frame = 3 
Query:  651 RTVPSSPLARVFGFGQLAAGLAMGTVAEAMRQSVAGGEGGSTGEKTGGRQGVNVKNYVVNDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLEKSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDYEKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVDQIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMTLIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQSMMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLTPPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRY 2033
            R VPSSPL+R+ GFG LAA LA+GT  E +R          +G K G RQ       +++D+N ERLAETLC MRGAALKLGQMLSIQDE+++PP LA+ALDRVRQ A +MP +QLH QL    G DWR+    FD+ PIAAASIGQ       VHRA L  G  VA+KIQYPGVA+S+ESDL NL+ +V  TN+LP GLYIDEII+  VG+EEL+ ECDY +EA +QERFR+ V  +    ++  VPRV  EL S  +LTT L  GVP+D+ + +PQ VRD + R +L  TV+ELF+WRFMQTDPNW NF+++ AT K+ L+DFGA REY KEFV+ YF +VWAAAN DEDT+L+ S +LKFLTGDES +M+ AHV AG+VVGEPF    R  E FDF GS +T RL +H  TFM  RLTPPP+E YSLHRKLAGAFLM IKL+A I CRD+LEE H +Y
Sbjct:  215 RHVPSSPLSRIIGFGSLAARLAVGTATEIVR----------SGGKGGARQA------LISDSNVERLAETLCTMRGAALKLGQMLSIQDENLVPPKLAEALDRVRQNAHVMPKDQLHAQLASELGEDWRDNFLEFDDIPIAAASIGQ-------VHRATLKSGDRVAIKIQYPGVAESIESDLMNLKRIVTYTNVLPKGLYIDEIIR--VGQEELTAECDYAQEADNQERFRQFVHENGMDDRFV-VPRVHRELSSSRILTTELISGVPIDKAVHLPQHVRDSIGRRILELTVRELFQWRFMQTDPNWSNFMYNSATDKVGLVDFGAAREYPKEFVNQYFNIVWAAANEDEDTMLDYSIRLKFLTGDESPAMLRAHVAAGMVVGEPF----RSHEPFDFYGSQLTKRLGEHTQTFMHSRLTPPPQEVYSLHRKLAGAFLMCIKLRAKISCRDVLEEAHAKY 645
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BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Match: A0A0P1AZD8_PLAHL (Atypical abc1 abc1-a protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZD8_PLAHL)

HSP 1 Score: 512 bits (1318), Expect = 1.120e-169
Identity = 272/461 (59.00%), Postives = 334/461 (72.45%), Query Frame = 3 
Query:  651 RTVPSSPLARVFGFGQLAAGLAMGTVAEAMRQSVAGGEGGSTGEKTGGRQGVNVKNYVVNDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLEKSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDYEKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVDQIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMTLIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQSMMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLTPPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRY 2033
            R VPSSPL+R+ GFG LAA LA+GT AE +R              +GG+ G    N +V+DAN E+LAETLC MRGAALKLGQMLSIQDE++IP  LA ALDRVR+ A +MP +QLHRQLE   G +WR++   FD+ PIAAASIGQ       VHRA LL+G  VA+KIQYPGVA+S+ SDL NL+ LV  TNILP GLYIDEII+  VG+EEL+ ECDY  EA +QERF+KL++     RK+  VPRV  EL +  +LTT L  GV +D+ + + QEVRD +AR +L  T+ ELF W FMQTDPNW NF+++ +T  + L+DFGA REY K FVD YF +VWAAAN DE T+++ S K++FLTGDES  M+ AH+ AG+VVGEPF    R  E FDF  S +T RL QH + FM  RLTPPP+EAYSLHRKLAGAFLM IKL+AV+PCRD+LE+V  RY
Sbjct:  148 RHVPSSPLSRILGFGGLAARLAVGTAAEIVR--------------SGGKNGT--YNALVSDANVEKLAETLCTMRGAALKLGQMLSIQDEAMIPSKLAVALDRVRENAHVMPKDQLHRQLENELGHEWRSRFQEFDDVPIAAASIGQ-------VHRATLLNGDRVAIKIQYPGVAESISSDLLNLKRLVTYTNILPRGLYIDEIIR--VGKEELTAECDYVSEAHNQERFKKLIDESGMNRKYV-VPRVYRELSTSRILTTQLISGVAIDKAVHLSQEVRDSIARRILELTIFELFNWHFMQTDPNWSNFMYNASTDTIGLVDFGAAREYAKSFVDDYFNIVWAAANEDEKTLIDYSIKMRFLTGDESPGMLRAHIAAGMVVGEPF----RSHEPFDFEKSKLTTRLGQHTEVFMHGRLTPPPQEAYSLHRKLAGAFLMCIKLRAVVPCRDVLEDVQRRY 578
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BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Match: A0A3M6VPM4_9STRA (ABC1 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPM4_9STRA)

HSP 1 Score: 509 bits (1311), Expect = 1.250e-168
Identity = 274/461 (59.44%), Postives = 334/461 (72.45%), Query Frame = 3 
Query:  651 RTVPSSPLARVFGFGQLAAGLAMGTVAEAMRQSVAGGEGGSTGEKTGGRQGVNVKNYVVNDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLEKSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDYEKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVDQIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMTLIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQSMMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLTPPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRY 2033
            + VPSSPL+R+ GFG LAA LA+GT AE +R              TGG+ G    N +V+DAN E+LAETLC MRGAALKLGQMLSIQDE++IP  L  ALDRVR+ A +MP NQLH+QLE  FG DW++K   FD+ PIAAASIGQ       VHRA L++   VA+KIQYPGVADS+ SDL NL+ LV  TNILP GLYIDEII+  VG EEL+ ECDY KEA +QERFR+L+E      ++  VPRV PEL +  +LTT L  GV VD+ + + Q+VR+ + R +L  T+ ELF WRFMQTDPNW NF+++ +T K+ L+DFGA REY K FVD YF +VWAAAN DE T+++ S KL FLTGDES +MM AH+ AG+VVGEPF    R  E FDF  S +T RL QH + FM  RLTPPP+EAYSLHRKLAGAFLM IKL+AVIPCR +LE+VH ++
Sbjct:  149 KRVPSSPLSRILGFGGLAAKLAVGTAAEFVR--------------TGGKNGT--YNALVSDANVEKLAETLCTMRGAALKLGQMLSIQDEAMIPSKLTVALDRVRENAHVMPKNQLHQQLETEFGEDWQSKFLEFDDVPIAAASIGQ-------VHRATLVNRDRVAIKIQYPGVADSIGSDLLNLKRLVTYTNILPRGLYIDEIIR--VGEEELTAECDYIKEAENQERFRELIEQSGMGEQYV-VPRVYPELSTARILTTQLISGVAVDKAVHLSQDVRNSIGRRLLELTIHELFNWRFMQTDPNWSNFMYNASTDKIGLVDFGAAREYPKSFVDEYFNVVWAAANEDEKTMIDSSIKLHFLTGDESPAMMRAHIAAGMVVGEPF----RSHEPFDFQKSQLTTRLGQHTEAFMHGRLTPPPQEAYSLHRKLAGAFLMCIKLRAVIPCRGVLEDVHRQH 579
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BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Match: K3WV13_GLOUD (ABC1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WV13_GLOUD)

HSP 1 Score: 510 bits (1314), Expect = 4.210e-168
Identity = 272/464 (58.62%), Postives = 338/464 (72.84%), Query Frame = 3 
Query:  645 RARTVPSSPLARVFGFGQLAAGLAMGTVAEAMRQSVAGGEGGSTGEKTGGRQGVNVKNYVVNDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLEKSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDYEKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVDQIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMTLIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQSMMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLTPPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRYV 2036
            + + VPSSPL+R+ GFG LAA LA+GT  E +R              +GG+QG    + +++D+N E+LAETLC MRGAALKLGQMLSIQDE++IPP LA ALDRVRQ A +MP  QLH+QL    G +WR     FD+ PIAAASIGQ       VHRA LL G  VA+KIQYPGVA+S+ESDL NL+ LV  TNILP GLYIDEII+  VG++EL+EEC+Y  EA +QERFR+L++       +  VPRV  E  +  VLTT L  GV +D+ M++ Q VR+ +AR +L  T++ELF+WRFMQTDPNW NF+++ AT K+ L+DFGA REY K FVD YF +VW AANRDE+ ++E S KLKFLTGDES +MM AH+ AG+VVGEPF       E FDF+ S +T RL+QH +TFM  RLTPPP+EAYSLHRKLAGAFLM IKL+AV+PCRD+LE VH +YV
Sbjct:  210 KEKHVPSSPLSRILGFGSLAAKLAVGTATEIVR--------------SGGKQGT--YSALISDSNVEKLAETLCTMRGAALKLGQMLSIQDENMIPPKLAVALDRVRQNAHVMPKAQLHQQLAAELGDNWREHFKEFDDVPIAAASIGQ-------VHRATLLSGERVAIKIQYPGVANSIESDLLNLKRLVTYTNILPKGLYIDEIIR--VGQQELTEECNYVAEADNQERFRQLIQESGMDGAYV-VPRVHREFSTARVLTTELISGVAIDKAMNLSQNVRNSIARRILELTIRELFDWRFMQTDPNWSNFMYNSATDKIGLVDFGAAREYDKSFVDPYFNIVWGAANRDEELMMEYSLKLKFLTGDESPAMMRAHMAAGMVVGEPFCTH----EPFDFHASELTKRLAQHTETFMHGRLTPPPQEAYSLHRKLAGAFLMCIKLRAVVPCRDVLEAVHAKYV 643
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BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Match: A0A2D4BCP6_PYTIN (Atypical/ABC1/ABC1-A protein kinase n=3 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BCP6_PYTIN)

HSP 1 Score: 509 bits (1312), Expect = 5.900e-168
Identity = 273/463 (58.96%), Postives = 337/463 (72.79%), Query Frame = 3 
Query:  645 RARTVPSSPLARVFGFGQLAAGLAMGTVAEAMRQSVAGGEGGSTGEKTGGRQGVNVKNYVVNDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLEKSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDYEKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVDQIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMTLIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQSMMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLTPPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRY 2033
            + R VPSSP++R+ GFG LAA LA+GT  E +R          TG K+G RQ       +++D+NAERLAETLC MRGAALKLGQMLSIQDE++IP  LA ALDRVRQ A +MP  QLH QL    G DWR+    FD+ PIAAASIGQ       VHR  L  G  VA+KIQYPGVA+S+ESDL NL+ LV  TNILP GLYIDEII+  VG+EEL+ EC+Y +EA +Q+RFR LV +      +  VP+V  E  +  +LTT L  GVPVD+++++PQ VRD +AR +L  TV+ELFEWRFMQTDPNW NF+++ +T K+ L+DFGA REY KEFVD YF +VWAAAN DE T+++ S ++KFLTGDES +MM AH+ AG+VVGEPF    R  E FDF+ S +T RL+Q+ +TFM  RLTPPP E YSLHRKLAGAFLM IKL+A +PCRD+LEEVH +Y
Sbjct:  199 KERHVPSSPISRILGFGSLAAKLAVGTATEIVR----------TGGKSGTRQA------LISDSNAERLAETLCTMRGAALKLGQMLSIQDENLIPSKLAIALDRVRQNAHVMPKAQLHAQLADELGEDWRSLFKEFDDVPIAAASIGQ-------VHRGTLATGERVAVKIQYPGVAESIESDLLNLKRLVTYTNILPKGLYIDEIIR--VGQEELTLECNYSQEADNQDRFRNLVHASAMSDAFV-VPKVHREASTSRILTTELISGVPVDKVVNLPQPVRDSIARRILELTVRELFEWRFMQTDPNWSNFMYNSSTDKIGLVDFGAAREYPKEFVDDYFNIVWAAANEDEKTMMDYSIRMKFLTGDESPAMMRAHMMAGMVVGEPF----RTHEPFDFHASQLTKRLAQYTETFMHSRLTPPPPEVYSLHRKLAGAFLMCIKLRARVPCRDVLEEVHAKY 631
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BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Match: A0A329T3W1_9STRA (Protein ABC transporter 1 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A329T3W1_9STRA)

HSP 1 Score: 507 bits (1305), Expect = 1.030e-167
Identity = 273/459 (59.48%), Postives = 333/459 (72.55%), Query Frame = 3 
Query:  657 VPSSPLARVFGFGQLAAGLAMGTVAEAMRQSVAGGEGGSTGEKTGGRQGVNVKNYVVNDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLEKSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDYEKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVDQIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMTLIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQSMMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLTPPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRY 2033
            VPSSPL+R+ GFG LAA LA+GT AE +R              +GG+ G    N +V+DANAE+LAETLC MRGAALKLGQMLSIQDE++IP  LA ALDRVR+ A +MP +QLH QL+   G DWR++   FD+ PIAAASIGQ       VHRA LL+G  VA+KIQYPGVA+S+ SDL NL+ LV  TNILP GLYIDEII+  VG+EEL+ ECDY  EA +QERF+KL+E +    K+  VPRV  EL +  +LTT L  GV VD+ + + Q+VRD +AR +L  T+ ELF WRFMQTDPNW NF+++ +T  + L+DFGA REY K FVD YF +VWAAAN DE T+++ S K+ FLTGDES SMM AHV AG+VVGEPF    R  E FDF  S +T RL QH + FM  RLTPPP+E YSLHRKLAGAFLM IKL+AV+PCRD+LE+V  +Y
Sbjct:  152 VPSSPLSRILGFGGLAARLAVGTAAEIVR--------------SGGKNGT--YNALVSDANAEKLAETLCTMRGAALKLGQMLSIQDEAMIPSKLAVALDRVRENAHVMPKDQLHHQLKTELGDDWRSRFQEFDDVPIAAASIGQ-------VHRATLLNGDRVAIKIQYPGVAESIGSDLLNLKRLVTYTNILPRGLYIDEIIR--VGKEELTAECDYLTEADNQERFKKLIEQNGMGEKYV-VPRVYRELSTARILTTQLISGVAVDKAVHLSQDVRDSIARRILELTIHELFNWRFMQTDPNWSNFMYNASTDTIGLVDFGAAREYPKSFVDDYFNIVWAAANEDEKTLVDYSIKMHFLTGDESPSMMRAHVAAGMVVGEPF----RSHEPFDFQKSKLTTRLGQHTEVFMHGRLTPPPQEVYSLHRKLAGAFLMCIKLRAVVPCRDVLEDVQRQY 580
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BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Match: H3GJS1_PHYRM (ABC1 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GJS1_PHYRM)

HSP 1 Score: 503 bits (1294), Expect = 2.010e-166
Identity = 270/459 (58.82%), Postives = 331/459 (72.11%), Query Frame = 3 
Query:  657 VPSSPLARVFGFGQLAAGLAMGTVAEAMRQSVAGGEGGSTGEKTGGRQGVNVKNYVVNDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLEKSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQYPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDYEKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVDQIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMTLIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQSMMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLTPPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRY 2033
            VPSSPL+R+ GFG LAA LA+GT AE +R              +GG+ G    N +V+DANAE+LAETLC MRGAALKLGQMLSIQDE++IP  LA ALDRVR+ A +MP +QLH+QLE   G DWR+K   FD+ PIAAASIGQ       VHRA LL+G  VA+KIQYPGVA+S+ SDL NL+ LV  TNILP GLYIDEII+  VG+EEL+ EC+Y  EA +QERF+KL+       K+  VPRV  EL +  +LTT L  GV VD+ + + Q+VR+ + R +L  T+ ELF WRFMQTDPNW NF+++ +T  + L+DFGA REY K FVD YF +VWAAAN DE T+++ S K+ FLTGDES +MM AH+ AG+VVGEPF    R  E FDF  S +T RL QH + FM  RLTPPP+E YSLHRKLAGAFLM IKL+AV+PCRD+LEEV  +Y
Sbjct:  127 VPSSPLSRILGFGGLAARLAVGTAAEIVR--------------SGGKNGT--YNALVSDANAEKLAETLCTMRGAALKLGQMLSIQDEAMIPSKLAVALDRVRENAHVMPKDQLHQQLESELGEDWRSKFQEFDDVPIAAASIGQ-------VHRATLLNGDRVAIKIQYPGVAESIGSDLLNLKRLVTYTNILPRGLYIDEIIR--VGKEELTAECNYANEAENQERFKKLIAQHGMGEKYV-VPRVYRELSTSRILTTQLISGVAVDKAVHLSQDVRNSIGRRILDLTIHELFNWRFMQTDPNWSNFMYNASTDTIGLVDFGAAREYPKSFVDDYFNVVWAAANEDEKTLVDSSIKMHFLTGDESPAMMRAHIAAGMVVGEPF----RSHEPFDFQKSKLTTRLGQHTEVFMHGRLTPPPQEVYSLHRKLAGAFLMCIKLRAVVPCRDVLEEVQRQY 555
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12717.2016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPB9_9PHAE7.540e-25579.66ABC1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YMK7_9STRA2.240e-18361.68Protein required for ubiquinone biosynthesis and f... [more]
A0A4D9DI78_9STRA7.890e-17258.58ABC1 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A8K1CGC3_PYTOL1.630e-17059.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1AZD8_PLAHL1.120e-16959.00Atypical abc1 abc1-a protein kinase n=1 Tax=Plasmo... [more]
A0A3M6VPM4_9STRA1.250e-16859.44ABC1 domain-containing protein n=1 Tax=Peronospora... [more]
K3WV13_GLOUD4.210e-16858.62ABC1 domain-containing protein n=1 Tax=Globisporan... [more]
A0A2D4BCP6_PYTIN5.900e-16858.96Atypical/ABC1/ABC1-A protein kinase n=3 Tax=Pythiu... [more]
A0A329T3W1_9STRA1.030e-16759.48Protein ABC transporter 1 n=12 Tax=Phytophthora Ta... [more]
H3GJS1_PHYRM2.010e-16658.82ABC1 domain-containing protein n=6 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12717contigH-elongata_contig12717:1495..7209 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score742.7
Seed ortholog evalue1.4e-211
Seed eggNOG ortholog2880.D8LRI9
Preferred nameADCK3
KEGG koko:K08869
GOsGO:0000166,GO:0001655,GO:0001822,GO:0002064,GO:0003674,GO:0003824,GO:0004672,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0006119,GO:0006122,GO:0006139,GO:0006163,GO:0006464,GO:0006468,GO:0006725,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006753,GO:0006778,GO:0006787,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009888,GO:0009987,GO:0010224,GO:0015980,GO:0015994,GO:0015996,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0019866,GO:0019898,GO:0021549,GO:0021575,GO:0021587,GO:0021680,GO:0021692,GO:0021695,GO:0021696,GO:0022037,GO:0022900,GO:0022904,GO:0030154,GO:0030198,GO:0030554,GO:0030855,GO:0030902,GO:0031090,GO:0031312,GO:0031314,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032194,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032835,GO:0032836,GO:0033013,GO:0033015,GO:0034641,GO:0035850,GO:0036094,GO:0036211,GO:0042180,GO:0042181,GO:0042440,GO:0042773,GO:0042775,GO:0043062,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045333,GO:0046034,GO:0046149,GO:0046483,GO:0046700,GO:0046777,GO:0048468,GO:0048513,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0051186,GO:0051187,GO:0051188,GO:0055086,GO:0055114,GO:0060322,GO:0060429,GO:0061005,GO:0061318,GO:0070013,GO:0071704,GO:0071840,GO:0072001,GO:0072006,GO:0072009,GO:0072010,GO:0072015,GO:0072073,GO:0072112,GO:0072310,GO:0072311,GO:0072521,GO:0097159,GO:0097367,GO:0140096,GO:1901004,GO:1901006,GO:1901135,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.ubiquinone biosynthetic process
EggNOG OGsCOG0661@1,KOG1234@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein required for ubiquinone (coenzyme Q) biosynthesis and for respiratory growth
Ec32 orthologEc-18_004710.1
Exons13
Model size2477
Cds size1782
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929754.3423696-UTR-H-elongata_contig12717:1494..15741622929754.3423696-UTR-H-elongata_contig12717:1494..1574Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12717 1495..1574 +
1691679144.926535-UTR-H-elongata_contig12717:1494..15741691679144.926535-UTR-H-elongata_contig12717:1494..1574Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12717 1495..1574 +
1622929754.3592784-UTR-H-elongata_contig12717:1789..19721622929754.3592784-UTR-H-elongata_contig12717:1789..1972Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12717 1790..1972 +
1691679144.9360034-UTR-H-elongata_contig12717:1789..19721691679144.9360034-UTR-H-elongata_contig12717:1789..1972Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12717 1790..1972 +
1622929754.5639086-UTR-H-elongata_contig12717:6777..72091622929754.5639086-UTR-H-elongata_contig12717:6777..7209Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12717 6778..7209 +
1691679145.0537395-UTR-H-elongata_contig12717:6777..72091691679145.0537395-UTR-H-elongata_contig12717:6777..7209Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12717 6778..7209 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929754.3755565-CDS-H-elongata_contig12717:1972..23051622929754.3755565-CDS-H-elongata_contig12717:1972..2305Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 1973..2305 +
1691679144.9469788-CDS-H-elongata_contig12717:1972..23051691679144.9469788-CDS-H-elongata_contig12717:1972..2305Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 1973..2305 +
1622929754.3900132-CDS-H-elongata_contig12717:2829..31471622929754.3900132-CDS-H-elongata_contig12717:2829..3147Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 2830..3147 +
1691679144.9559135-CDS-H-elongata_contig12717:2829..31471691679144.9559135-CDS-H-elongata_contig12717:2829..3147Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 2830..3147 +
1622929754.4063241-CDS-H-elongata_contig12717:3345..35431622929754.4063241-CDS-H-elongata_contig12717:3345..3543Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 3346..3543 +
1691679144.9668353-CDS-H-elongata_contig12717:3345..35431691679144.9668353-CDS-H-elongata_contig12717:3345..3543Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 3346..3543 +
1622929754.421413-CDS-H-elongata_contig12717:3636..38011622929754.421413-CDS-H-elongata_contig12717:3636..3801Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 3637..3801 +
1691679144.9777575-CDS-H-elongata_contig12717:3636..38011691679144.9777575-CDS-H-elongata_contig12717:3636..3801Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 3637..3801 +
1622929754.4363117-CDS-H-elongata_contig12717:4163..42201622929754.4363117-CDS-H-elongata_contig12717:4163..4220Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 4164..4220 +
1691679144.9859064-CDS-H-elongata_contig12717:4163..42201691679144.9859064-CDS-H-elongata_contig12717:4163..4220Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 4164..4220 +
1622929754.4511683-CDS-H-elongata_contig12717:4397..44871622929754.4511683-CDS-H-elongata_contig12717:4397..4487Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 4398..4487 +
1691679144.9934764-CDS-H-elongata_contig12717:4397..44871691679144.9934764-CDS-H-elongata_contig12717:4397..4487Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 4398..4487 +
1622929754.4713483-CDS-H-elongata_contig12717:4646..47061622929754.4713483-CDS-H-elongata_contig12717:4646..4706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 4647..4706 +
1691679145.0014157-CDS-H-elongata_contig12717:4646..47061691679145.0014157-CDS-H-elongata_contig12717:4646..4706Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 4647..4706 +
1622929754.4839633-CDS-H-elongata_contig12717:4894..50121622929754.4839633-CDS-H-elongata_contig12717:4894..5012Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 4895..5012 +
1691679145.0093648-CDS-H-elongata_contig12717:4894..50121691679145.0093648-CDS-H-elongata_contig12717:4894..5012Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 4895..5012 +
1622929754.499367-CDS-H-elongata_contig12717:5195..53111622929754.499367-CDS-H-elongata_contig12717:5195..5311Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 5196..5311 +
1691679145.0177858-CDS-H-elongata_contig12717:5195..53111691679145.0177858-CDS-H-elongata_contig12717:5195..5311Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 5196..5311 +
1622929754.5131238-CDS-H-elongata_contig12717:5577..56781622929754.5131238-CDS-H-elongata_contig12717:5577..5678Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 5578..5678 +
1691679145.0268292-CDS-H-elongata_contig12717:5577..56781691679145.0268292-CDS-H-elongata_contig12717:5577..5678Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 5578..5678 +
1622929754.526117-CDS-H-elongata_contig12717:6020..61071622929754.526117-CDS-H-elongata_contig12717:6020..6107Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 6021..6107 +
1691679145.0357258-CDS-H-elongata_contig12717:6020..61071691679145.0357258-CDS-H-elongata_contig12717:6020..6107Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 6021..6107 +
1622929754.5441148-CDS-H-elongata_contig12717:6638..67771622929754.5441148-CDS-H-elongata_contig12717:6638..6777Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 6639..6777 +
1691679145.0442972-CDS-H-elongata_contig12717:6638..67771691679145.0442972-CDS-H-elongata_contig12717:6638..6777Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12717 6639..6777 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12717.2016.1prot_H-elongata_contig12717.2016.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12717 1973..6777 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12717.2016.1

>prot_H-elongata_contig12717.2016.1 ID=prot_H-elongata_contig12717.2016.1|Name=mRNA_H-elongata_contig12717.2016.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=594bp
MPTTTTQDFRSQQGTLPKEQPSLLPLSATEKETVEDPKKADGAKQEIEAL
AGVLRAEAEATTIPAATGESSGAETVSLKVATGSRVADESEAWPFAEAST
AADSAGTSAKNGDGSDGGVGRDGMINSRARTVPSSPLARVFGFGQLAAGL
AMGTVAEAMRQSVAGGEGGSTGEKTGGRQGVNVKNYVVNDANAERLAETL
CRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADIMPLNQLHRQLE
KSFGRDWRNKLSSFDETPIAAASIGQAGPFSLPVHRARLLDGTEVAMKIQ
YPGVADSVESDLRNLQLLVKLTNILPPGLYIDEIIKASVGREELSEECDY
EKEAAHQERFRKLVESDEHLRKWASVPRVVPELLSKEVLTTHLAPGVPVD
QIMDVPQEVRDHVARLMLRCTVKELFEWRFMQTDPNWGNFLFDRATGKMT
LIDFGACREYKKEFVDGYFRLVWAAANRDEDTILEVSQKLKFLTGDESQS
MMGAHVKAGLVVGEPFIDRGRGGELFDFNGSNITARLSQHGDTFMKHRLT
PPPREAYSLHRKLAGAFLMNIKLKAVIPCRDILEEVHDRYVFG*
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mRNA from alignment at H-elongata_contig12717:1495..7209+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12717.2016.1 ID=mRNA_H-elongata_contig12717.2016.1|Name=mRNA_H-elongata_contig12717.2016.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5715bp|location=Sequence derived from alignment at H-elongata_contig12717:1495..7209+ (Himanthalia elongata Himel1 dioecious)
ACGCGGAAGCACCGGCCGCAGCTCAACGGCTGCTACGCATCAGAGAGCAC
GGAGTGGGGCTGGCTTGCAGCCTCAAGGATGTGAGTCACGAGGTCGCTTA
AGCCGTATATGCTTCTCCGGTGGCGTCGCTTTTTGTTGGTGATACACTCA
ATTATACGAGCTAGAGTCAATACTGAACCGTCCGGTAGACTCTACAGTCA
GCATCGCCAGCACAGACATCTAGTTGGAATGAGTTTAAGGTTTTTCTAAT
AAAAATAAAGTTTGTTACAGTCCTGTACGCTTGGCTTCCTTCCAGGCGGT
CTCCTCGGCGACTTCTTCTGCGGCGCAACGAGGCCCACTCCCTTCTGATT
CCTCCAGCAAGACATCTACTCACGTCGCTCCCCCGCTTAGAGTGACCTCT
GCTTCTAATGTCCGCGATCCTGCAGTGTCCCCTTCTACTGTTACTAACGG
CAACGTCGCCGGCTTCGCTGCGACTGAAATGCCTACAACGACAACCCAAG
ATTTCAGATCTCAACAAGGGACACTTCCGAAGGAGCAACCCTCTCTCCTA
CCACTGTCGGCCACCGAGAAGGAAACCGTCGAAGATCCAAAAAAGGCTGA
TGGAGCCAAGCAGGAAATCGAGGCACTAGCCGGAGTACTTAGAGCAGAAG
CGGAAGCGACCACAATACCCGCTGCCACTGGCGAGTCGTCGGGCGCGGAA
ACGGTTTCCCTCAAGGTGGCCACGGGTTCAAGGGTCGCAGATGAGTCAGA
AGCCTGGCCCTTCGCCGAGGCTTCCACTGCCGCTGACTCAGCAGGCACCA
GCGCAAAGAATGTGAGATACCCCTGAAGATGTCGGTGTTGTTTAGGGTAG
GTCCGGTGCTTCAACGCAAAGTAAGCAGTTATTGTTGGTGTTGGTCACAC
ATTTAGCAGTATAGAGTAAGACCAACCGGATTTGGTTGCCTTCTGCTCGT
GGTCAGCTGAACAGGGAAAATAATTTTCCCCTAAACAGTATGAGCCCTCG
GAAGATTTCCGTTGCCTTCGTCTTCGCCATATTTTTGTTGTGGTACTTGA
AGGCATGTGTGCGCCCACGACCGAAGAGTGCGAAGAGCCTAAACATCTTC
TGGAGCCACGCCACCGAATGGCGCTTAGCTCTCAATGGGCTGCCACCCAC
GGTGTGGGTGGGGTCCTCCTGAAAGTAGATTCAGCGAACGAAGGAGGTGC
ATCGAGCGCTGTAAACGCGCAATTCCGTGACCAAGAGGAACAGAGCATAA
CACAGCGCCATCAAATTGGACTGATATTAACCTGCGCGATCCACATCACT
CATTCTACCTCGGGTCGTGCGCACGCGTGTTGCAGGGTGACGGCAGCGAC
GGTGGGGTCGGGAGAGACGGCATGATCAACTCCCGAGCGCGCACGGTCCC
CTCCTCCCCGCTTGCGCGCGTCTTCGGATTTGGCCAGCTCGCGGCGGGGC
TGGCTATGGGAACCGTGGCAGAGGCTATGCGGCAGTCAGTGGCGGGCGGG
GAGGGGGGAAGTACGGGAGAGAAGACGGGGGGGCGGCAAGGGGTAAATGT
GAAGAACTACGTGGTGAACGACGCGAACGCGGAGCGCCTCGCGGAGACGC
TTTGTCGTATGCGAGGAGCGGCGCTGAAGCTTGGGCAGATGCTCTCCATC
CAGGTGCGCCAAGGACGAGCGGTTCGTGACCCTCTCCCTTGAGGCGGTGC
TTCTCGTAGAATGCTGCTAGGCACTTGGGGCGTCTTGGGACGCTGGTGTT
AGCATGAGTTGAACCCATACCGAAGGTATTGTGTAGGCTGATTTTTTCTT
GTCCCTTCCTCTTGGATGCTCCGTCTCTCGTTAAATGCTGCTACGTCGCA
GGACGAGAGCGTTATCCCTCCGTCCCTCGCAAAGGCGCTCGACAGGGTTC
GACAGGGCGCAGACATCATGCCCTTGAACCAGCTACACAGACAGCTGGAG
AAGAGCTTTGGGAGAGATTGGAGGAACAAGCTGTCCTCATTCGACGAGAC
ACCGATCGCGGCTGCAAGCATTGGACAGGCGGGTCCTTTTAGCCTTCCTG
TTGCGCAGCGACACGCACTGATACCCGATGCCCTCAACATCGTCAAGTTG
TCCTCCGCTCAAGCTCGGCCTCCCCATGATCTCACGCCACAGGTACACAG
AGCCCGTTTGCTAGACGGAACGGAGGTGGCGATGAAGATTCAGTATCCTG
GGGTGGCGGACAGCGTAGAGTCCGACCTTCGCAACTTGCAGCTGCTGGTG
AAATTGACCAACATTCTCCCGCCTGGACTCTACATCGACGAAATCATCAA
GGCGAGCGTTACGACCACGCGCCCAATATACACATCCCATACCACGCGTG
ATTGCTCTGTCCGCGCGCGTCTCCTTCGCTCCTCGCTCATGACGCGATCC
ACCGCCAACACTTAAGACGTAAGCAGACGGCAGACGGCTGTCAAGGGAAC
TGGATGATGATACATTTCGATACCACCCTCTTGCCGGAGGGCATCGCTTA
CAATCCCGAAGGCGTTCGCGTCGCGCTGAACGATTTCGTGCGGGCTTGAA
CTTGTGACAACTTGTGATACGTAGAGTATTGAAAGATAATCAGATCGCAG
CTTCACACCCTGCGTGCTCTGGGCTAACCCTCGATGCATGTTCCCGCCTT
TACTGTTAACGCTACCAAGGTCGGCCGAGAAGAGCTTAGCGAAGAGTGTG
ACTACGAGAAGGAAGCAGCTCATCAGGTGCAGAATCGCGTCGCTCGCGTC
TGATAAGGCGTACAGTTTCGAAATTCTGGATCAACGCGAGGGTGCGGGGG
GGTGGGGGGGTCACTTCTCCGCTTTCTTGCCTCTTGAAGCTGGAGGAGGG
CATTGGCGTAGATGAAATAATTCCTCAGCGCGTGACTCCCTCTCGCTCTG
CAGGAGCGATTCAGAAAATTGGTCGAATCGGACGAGCACCTACGGAAATG
GGCGAGCGTGCCGAGGGTCGTTCCTGAACTCCTAAGCAAAGAGGTGAGCA
AAACGATGCCGAACGCGACAAGAATGCGTGGCGTCGAAGACGGTGGCATT
TACTTTTTTCGAAGGTTCCTCTGGTGTATCATGAAAGCCCCGAGATCAAG
GGAACCACAAGTTTTTAGCGATCTTGGTTACCCCGTCGATCGTTACGCAC
AGGTCCTGACGACGCACTTGGCGCCTGGCGTGCCCGTGGATCAGATCATG
GATGTACCTCAGGTCAGCCGTGGTATATATCGTATATATGCCTTTACACT
CGCCTTGTGTCGCCATGTACGTGACCACCGAAATAACGCGCGGTAATAGC
GCAAGTGGGTTGTCGAGGAGGCATGGCGCAAGCGTCGCTCGCTGTGAGGT
TATTCGGAGACCGTTGGCCTCTCTCGACTCAAACCGATTCGTCGAGGCAG
GAGGTACGAGATCACGTGGCGAGATTGATGCTACGCTGCACGGTGAAAGA
GCTGTTCGAGTGGCGCTTCATGCAGACGGACCCCAACTGGGGCAACTTCC
TCTTCGACCGCGCCACTGGTGAGCGCGCTGTATTCAATCCACCCGTCTAC
CCAGATTTCGCATGAGAGTTGCGTTGTCATGGACGACGAATTGCTCGTCT
GAAAAAAACAATTACGTTTATCGTTGACGAGGCTACATGAGATAGTGTTA
CAGGATGTCCCTTGAAGCTGCGTCCTGCGTCCGCGGGGCCGTCATCACTA
GGCAAGATGACCCTGATCGACTTCGGGGCATGTCGGGAGTACAAGAAGGA
GTTCGTCGACGGATATTTCCGTCTTGTTTGGGCTGCTGCCAATCGCGACG
AGGACACCATCTTAGAGGCACGTTCCCTCGAAAGCATTCAATTCGCTTTA
CGTATTTTATCTAGGTTCGGTTCGACGACGAGTGTTGCGGCGTTTCAGTC
GCTGAGTTTGACTGCAGAGATGTCCCCTGAGTCGACACGCTGGCATCGCC
GGTCATTTGTATGTCGTGTACAGCGGAAGCACGATGTGGAAGGATTCCGC
CAACCGCATCCGTAAATCTCCCACGTCACCGCAGTACCGTAATTTCATTG
TTGTCTTTTTTTCGTTGATTTTTAATCAAACAGGTGAGCCAAAAGCTCAA
GTTTTTGACGGGAGACGAGTCCCAGTCGATGATGGGCGCACACGTGAAAG
CAGGGCTCGTCGTAGGAGAACCCTTCATAGACAGGTATGCCGCGGGTAGT
CGTCGGGGATGTGTTGCCTCTTGCAGCGTTATAGTTCCTCCTCACCAGGA
CCCTAAGTGTGTAAGGATCTCATAATTCGTGTTACAACCGAAAGATTGGC
GAGCAGTGCCTGTTGTATCTGACAATAACGTGTGAAAAAAACGCCTCCGC
ATGTACGTGATTTTATTTTCATATTGGTCATGCTTTAACGGGTCGTCCAA
GCCCTATCCTTGTCGAAAAACACGCCTTGCGGTGCGCCAGAGCACTCTAC
GCTGCGTGCCGATTCACGAGGCCGAGCCCCTCGCTTGTCTGTTTGGTTTT
GGCCACATTACGACTCTTGTCTGCAGAGGACGAGGAGGAGAGCTGTTCGA
CTTCAACGGGAGCAACATCACCGCCAGGCTGAGCCAACATGGAGACACTT
TCATGAAACACAGGTATGATTCGAGCGGTGACATTACACCCAGCTCCAGA
ACGCACCCCACCCGGCCCCATAAAAACAAAGGTTGGTTACTATAGTTGCC
ATTATTGCGATATACAAATTTGTATTGTATTGCAAGAGCTGTTGTCGAAC
GAACGAAGGCGCTATCGCCGGTATTCATATATGTATTGCTATCCTAGTAG
AGTGCTAATATAGTAGCTGTTGGCAAAAGCCATCGCCGCCGCTGCTACCT
TCTTCCCAGCTTTTGCAACCCCCCAGCCGTCGGTTTTAGCGGCAGCCCTG
ACGAGGGGGCGATGTCCGATTGGCGGGGCGGGAGCGAGATGCACGATCTG
GGCCCCCAAGCGTTTTGTCCTACCCCCGTTTGGCCCCTCAGATTAATTAC
ATTGAAAGCCAAAGAGGCAAGAGACATGAAGCTATACTTTGTAGCTTGAC
CATGAGGAACCAATATGTGTACTATTCTGGTATGTGTGCTTAGAGAAAAT
ATATCGATATATATATATATATATTGTGTGTGCCGCCGCTCCAGGTTAAC
GCCACCACCTCGAGAGGCGTACAGCCTGCACCGCAAACTGGCAGGGGCGT
TCCTAATGAATATTAAGCTGAAGGCTGTGATACCCTGCAGAGATATCTTG
GAAGAAGTTCACGACCGGTATGTATTTGGATGACAGACGATGTTCGTGCC
GGGTATGCTTAATTCAGCAGGGGGCGGAAAAAAACGCCATGGACCGGGGA
CCGGGGATGGCTGGACCGAGGCGGGAGATAATATTGGGTTCTTTCGAGAA
TTCTTTAAATTCCGAAAACAACTTTCGTTACTTTACTATTTGTGTTGTGT
CAACGGAAAGTGGAATGAAGGAGGCGTTCGTTCTTGAAGGAGGCGGGGGG
ATAATATTGGGTTCTTTCGAGAATTCTTTAACTGCCGAAAACAATTTTAA
TTACTGTATGTATGTATGTATTATTGTATCAACTATCAACGGAAAGTGGA
GCGAAAAGTGTTCGTTCGTCGAATTGCGTATGTTGTTGTGGAAATGGTTG
AAGTACCACGATAGGTTTGTGCGGGCTAGACCAAGCTTGAAAATGTTTCA
AACCTTAGAGCTATG
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Coding sequence (CDS) from alignment at H-elongata_contig12717:1495..7209+

>mRNA_H-elongata_contig12717.2016.1 ID=mRNA_H-elongata_contig12717.2016.1|Name=mRNA_H-elongata_contig12717.2016.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3564bp|location=Sequence derived from alignment at H-elongata_contig12717:1495..7209+ (Himanthalia elongata Himel1 dioecious)
ATGCCTACAACGACAACCCAAGATTTCAGATCTCAACAAGGGACACTTCC
GAAGGAGCAACCCTCTCTCCTACCACTGTCGGCCACCGAGAAGGAAACCG
TCGAAGATCCAAAAAAGGCTGATGGAGCCAAGCAGGAAATCGAGGCACTA
GCCGGAGTACTTAGAGCAGAAGCGGAAGCGACCACAATACCCGCTGCCAC
TGGCGAGTCGTCGGGCGCGGAAACGGTTTCCCTCAAGGTGGCCACGGGTT
CAAGGGTCGCAGATGAGTCAGAAGCCTGGCCCTTCGCCGAGGCTTCCACT
GCCGCTGACTCAGCAGGCACCAGCGCAAAGAATATGCCTACAACGACAAC
CCAAGATTTCAGATCTCAACAAGGGACACTTCCGAAGGAGCAACCCTCTC
TCCTACCACTGTCGGCCACCGAGAAGGAAACCGTCGAAGATCCAAAAAAG
GCTGATGGAGCCAAGCAGGAAATCGAGGCACTAGCCGGAGTACTTAGAGC
AGAAGCGGAAGCGACCACAATACCCGCTGCCACTGGCGAGTCGTCGGGCG
CGGAAACGGTTTCCCTCAAGGTGGCCACGGGTTCAAGGGTCGCAGATGAG
TCAGAAGCCTGGCCCTTCGCCGAGGCTTCCACTGCCGCTGACTCAGCAGG
CACCAGCGCAAAGAATGGTGACGGCAGCGACGGTGGGGTCGGGAGAGACG
GCATGATCAACTCCCGAGCGCGCACGGTCCCCTCCTCCCCGCTTGCGCGC
GTCTTCGGATTTGGCCAGCTCGCGGCGGGGCTGGCTATGGGAACCGTGGC
AGAGGCTATGCGGCAGTCAGTGGCGGGCGGGGAGGGGGGAAGTACGGGAG
AGAAGACGGGGGGGCGGCAAGGGGTAAATGTGAAGAACTACGTGGTGAAC
GACGCGAACGCGGAGCGCCTCGCGGAGACGCTTTGTCGTATGCGAGGAGC
GGCGCTGAAGCTTGGGCAGATGCTCTCCATCCAGGGTGACGGCAGCGACG
GTGGGGTCGGGAGAGACGGCATGATCAACTCCCGAGCGCGCACGGTCCCC
TCCTCCCCGCTTGCGCGCGTCTTCGGATTTGGCCAGCTCGCGGCGGGGCT
GGCTATGGGAACCGTGGCAGAGGCTATGCGGCAGTCAGTGGCGGGCGGGG
AGGGGGGAAGTACGGGAGAGAAGACGGGGGGGCGGCAAGGGGTAAATGTG
AAGAACTACGTGGTGAACGACGCGAACGCGGAGCGCCTCGCGGAGACGCT
TTGTCGTATGCGAGGAGCGGCGCTGAAGCTTGGGCAGATGCTCTCCATCC
AGGACGAGAGCGTTATCCCTCCGTCCCTCGCAAAGGCGCTCGACAGGGTT
CGACAGGGCGCAGACATCATGCCCTTGAACCAGCTACACAGACAGCTGGA
GAAGAGCTTTGGGAGAGATTGGAGGAACAAGCTGTCCTCATTCGACGAGA
CACCGATCGCGGCTGCAAGCATTGGACAGGCGGGTCCTTTTAGCCTTCCT
GACGAGAGCGTTATCCCTCCGTCCCTCGCAAAGGCGCTCGACAGGGTTCG
ACAGGGCGCAGACATCATGCCCTTGAACCAGCTACACAGACAGCTGGAGA
AGAGCTTTGGGAGAGATTGGAGGAACAAGCTGTCCTCATTCGACGAGACA
CCGATCGCGGCTGCAAGCATTGGACAGGCGGGTCCTTTTAGCCTTCCTGT
ACACAGAGCCCGTTTGCTAGACGGAACGGAGGTGGCGATGAAGATTCAGT
ATCCTGGGGTGGCGGACAGCGTAGAGTCCGACCTTCGCAACTTGCAGCTG
CTGGTGAAATTGACCAACATTCTCCCGCCTGGACTCTACATCGACGAAAT
CATCAAGGCGAGCGTACACAGAGCCCGTTTGCTAGACGGAACGGAGGTGG
CGATGAAGATTCAGTATCCTGGGGTGGCGGACAGCGTAGAGTCCGACCTT
CGCAACTTGCAGCTGCTGGTGAAATTGACCAACATTCTCCCGCCTGGACT
CTACATCGACGAAATCATCAAGGCGAGCGTCGGCCGAGAAGAGCTTAGCG
AAGAGTGTGACTACGAGAAGGAAGCAGCTCATCAGGTCGGCCGAGAAGAG
CTTAGCGAAGAGTGTGACTACGAGAAGGAAGCAGCTCATCAGGAGCGATT
CAGAAAATTGGTCGAATCGGACGAGCACCTACGGAAATGGGCGAGCGTGC
CGAGGGTCGTTCCTGAACTCCTAAGCAAAGAGGAGCGATTCAGAAAATTG
GTCGAATCGGACGAGCACCTACGGAAATGGGCGAGCGTGCCGAGGGTCGT
TCCTGAACTCCTAAGCAAAGAGGTCCTGACGACGCACTTGGCGCCTGGCG
TGCCCGTGGATCAGATCATGGATGTACCTCAGGTCCTGACGACGCACTTG
GCGCCTGGCGTGCCCGTGGATCAGATCATGGATGTACCTCAGGAGGTACG
AGATCACGTGGCGAGATTGATGCTACGCTGCACGGTGAAAGAGCTGTTCG
AGTGGCGCTTCATGCAGACGGACCCCAACTGGGGCAACTTCCTCTTCGAC
CGCGCCACTGGAGGTACGAGATCACGTGGCGAGATTGATGCTACGCTGCA
CGGTGAAAGAGCTGTTCGAGTGGCGCTTCATGCAGACGGACCCCAACTGG
GGCAACTTCCTCTTCGACCGCGCCACTGGCAAGATGACCCTGATCGACTT
CGGGGCATGTCGGGAGTACAAGAAGGAGTTCGTCGACGGATATTTCCGTC
TTGTTTGGGCTGCTGCCAATCGCGACGAGGACACCATCTTAGAGGCAAGA
TGACCCTGATCGACTTCGGGGCATGTCGGGAGTACAAGAAGGAGTTCGTC
GACGGATATTTCCGTCTTGTTTGGGCTGCTGCCAATCGCGACGAGGACAC
CATCTTAGAGGTGAGCCAAAAGCTCAAGTTTTTGACGGGAGACGAGTCCC
AGTCGATGATGGGCGCACACGTGAAAGCAGGGCTCGTCGTAGGAGAACCC
TTCATAGACAGGTGAGCCAAAAGCTCAAGTTTTTGACGGGAGACGAGTCC
CAGTCGATGATGGGCGCACACGTGAAAGCAGGGCTCGTCGTAGGAGAACC
CTTCATAGACAGAGGACGAGGAGGAGAGCTGTTCGACTTCAACGGGAGCA
ACATCACCGCCAGGCTGAGCCAACATGGAGACACTTTCATGAAACACAGA
GGACGAGGAGGAGAGCTGTTCGACTTCAACGGGAGCAACATCACCGCCAG
GCTGAGCCAACATGGAGACACTTTCATGAAACACAGGTTAACGCCACCAC
CTCGAGAGGCGTACAGCCTGCACCGCAAACTGGCAGGGGCGTTCCTAATG
AATATTAAGCTGAAGGCTGTGATACCCTGCAGAGATATCTTGGAAGAAGT
TCACGACCGGTATGTATTTGGATGAGTTAACGCCACCACCTCGAGAGGCG
TACAGCCTGCACCGCAAACTGGCAGGGGCGTTCCTAATGAATATTAAGCT
GAAGGCTGTGATACCCTGCAGAGATATCTTGGAAGAAGTTCACGACCGGT
ATGTATTTGGATGA
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