prot_H-elongata_contig127084.2010.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig127084.2010.1
Unique Name	prot_H-elongata_contig127084.2010.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	101

Homology

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BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.660e-18
Identity = 49/81 (60.49%), Postives = 59/81 (72.84%), Query Frame = 0

Query:   21 GKGKLTVGQRLQIIKEVTDGKQRSKVAQQYKVSTSYISKLMKPDNIAALEKVRDQQLNQEVLRRTKAKHEDLEARLHTWIK 101
            G+ KLT GQRLQ++++V  GKQRSKVA  Y V+TSYISKLMKPD +A L K RD +LN + LR     H+DLE RL  WIK
Sbjct:  166 GQNKLTTGQRLQLVRDVQAGKQRSKVAATYGVTTSYISKLMKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIK 246

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BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Match: A0A6H5JYC6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC6_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.920e-18
Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 0

Query:   11 GKTSKPRTETGKGKLTVGQRLQIIKEVTDGKQRSKVAQQYKVSTSYISKLMKPDNIAALEKVRDQQLNQEVLRRTKAKHEDLEARLHTWIK 101
            G+ +KP ++ GK KLTVGQRLQI++ V  G+QRSKVA  + V  +YI+KLMKP+ IA+LEK RD +LN +  R     H  LEARL+ WIK
Sbjct:  188 GRKAKPGSDHGKNKLTVGQRLQIVRAVQGGQQRSKVAGDFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIK 278

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BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Match: A0A6H5K0Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y4_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 3.690e-17
Identity = 47/99 (47.47%), Postives = 67/99 (67.68%), Query Frame = 0

Query:    3 GDAAPAKKGKTSKPRTETGKGKLTVGQRLQIIKEVTDGKQRSKVAQQYKVSTSYISKLMKPDNIAALEKVRDQQLNQEVLRRTKAKHEDLEARLHTWIK 101
            G  + AK+ + SKP   TGK KL++ QRL+I+KEV  G +RS VA ++ V T Y SK M P+ IA L+K+RD +LNQ+ LR  +  H+++E +L  WIK
Sbjct:   72 GTGSVAKEVRVSKPGRNTGKNKLSMTQRLRIVKEVQGGTKRSMVAAKWSVGTWYTSKFMNPEKIAELKKIRDMELNQDALRAPRPVHDEVEEKLRKWIK 170

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BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Match: A0A6H5LC91_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC91_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.120e-15
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 0

Query:   14 SKPRTETGKGKLTVGQRLQIIKEVTDGKQRSKVAQQYKVSTSYISKLMKPDNIAALEKVRDQQLNQEVLRRTKAKHEDLEARLHTWIK 101
            +KP ++ GK K TV QR +I++ V  G+QRSKVA  Y V  +Y+S LMKP  IAALEK  D +LN    R     H +LEARL+ WIK
Sbjct:  109 AKPGSDHGKNKPTVAQRWKIVEAVRGGRQRSKVAADYNVGKAYVSNLMKPPMIAALEKAHDMELNMGAKRAPTLVHAELEARLNQWIK 196

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BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 9.980e-15
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 0

Query:   29 QRLQIIKEVTDGKQRSKVAQQYKVSTSYISKLMKPDNIAALEKVRDQQLNQEVLRRTKAKHEDLEARLHTWIK 101
            QRL I+KEV  G +RS VA ++ V TSYISKLM P+ IA LEKVRD +LNQ+ LR  K  H+++E +L  WIK
Sbjct:    3 QRLHIVKEVQGGAKRSMVAAKWNVGTSYISKLMNPEKIAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIK 75

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BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Match: A0A6H5JPF0_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPF0_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.130e-14
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0

Query:   29 QRLQIIKEVTDGKQRSKVAQQYKVSTSYISKLMKPDNIAALEKVRDQQLNQEVLRRTKAKHEDLEARLHTWIK 101
            QRLQI+KEV  G  RS VA +  V TSYI KLM P+ +A LEKVRD +LNQ+ LR  K  H+++E +L  WIK
Sbjct:    3 QRLQIVKEVQGGATRSMVAAKRNVGTSYIGKLMMPEKVAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIK 75

[Close]

BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Match: A0A6H5L5J7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J7_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 5.360e-13
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 0

Query:   29 QRLQIIKEVTDGKQRSKVAQQYKVSTSYISKLMKPDNIAALEKVRDQQLNQEVLRRTKAKHEDLEARLHTWIK 101
            QRLQI+KEV  G +RS V   + V TS ISKLM P+ IA LEKVRD + NQ+ LR  K  H+++E +L  WIK
Sbjct:    3 QRLQIVKEVQGGAKRSMVTALWNVGTSDISKLMNPEKIAELEKVRDMEFNQDALRAPKPVHDEVEEKLRKWIK 75

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BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Match: A0A6H5K3I0_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I0_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 6.820e-13
Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 0

Query:    5 AAPAKKGKTSKPRTETGKGKLTVGQRLQIIKEVTDGKQRSKVAQQYKVSTSYISKLMKPDNIAALEKVRDQQLNQEVLRRTKAKHEDLEARLHTWI 100
            AA  KK K S P  +TGK KL + QR +++KEV DG  R+KVA +Y VS  Y++KLM PDNIA L K    +LN E     +    +LE R+  WI
Sbjct:   20 AAATKKRKASTPGPDTGKNKLNLRQRHELVKEVQDGGVRAKVAVKYGVSKGYVAKLMMPDNIAKLSKAVQTELNPEARHVLEPVEAELEQRVLKWI 115

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BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.580e-10
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 0

Query:   14 SKPRTETGKGKLTVGQRLQIIKEVTDGKQRSKVAQQYKVSTSYISKLMKPDNIAALEKVRDQQLNQEVLRRTKAKHEDLE 93
            +K  ++ G+ KLT+ QR +I++ V  G+QRSKVA  Y V  +Y+SKLMKP  IAALEK RD +LN    R     H +LE
Sbjct:  113 AKSGSDHGENKLTIAQRWKIVEAVRGGRQRSKVAADYNVGKAYVSKLMKPPMIAALEKARDIELNMGAKRTPTPIHAELE 192

[Close]

BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Match: A0A6H5KH51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH51_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.790e-8
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0

Query:    3 GDAAPAKKGKTSKPRTETGKGKLTVGQRLQIIKEVTDGKQRSKVAQQYKVSTSYISKLMKP 63
            G  + AKK + SKP  +TGK KL++ QRLQI+KEV    +RS VA +  V TSYISKLM P
Sbjct:   38 GTGSVAKKVRVSKPGRDTGKNKLSMTQRLQIVKEVQGEGKRSMVAAKRNVGTSYISKLMNP 98

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot

BLAST of mRNA_H-elongata_contig127084.2010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
A0A6H5JV64_9PHAE	1.660e-18	60.49	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JYC6_9PHAE	1.920e-18	54.95	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5K0Y4_9PHAE	3.690e-17	47.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5LC91_9PHAE	1.120e-15	51.14	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JNS8_9PHAE	9.980e-15	57.53	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5JPF0_9PHAE	2.130e-14	56.16	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5L5J7_9PHAE	5.360e-13	54.79	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5K3I0_9PHAE	6.820e-13	46.88	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KA74_9PHAE	1.580e-10	48.75	HTH CENPB-type domain-containing protein n=1 Tax=E...	[more]
A0A6H5KH51_9PHAE	1.790e-8	55.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..101
None	No IPR available	GENE3D	1.10.10.60		coord: 22..66 e-value: 8.5E-6 score: 27.2
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 24..64

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig127084	contig	H-elongata_contig127084:1430..1732 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig127084.2010.1	mRNA_H-elongata_contig127084.2010.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig127084 1430..1732 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig127084.2010.1 ID=prot_H-elongata_contig127084.2010.1|Name=mRNA_H-elongata_contig127084.2010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
NGGDAAPAKKGKTSKPRTETGKGKLTVGQRLQIIKEVTDGKQRSKVAQQY
KVSTSYISKLMKPDNIAALEKVRDQQLNQEVLRRTKAKHEDLEARLHTWI
K

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf