prot_H-elongata_contig12672.1984.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig12672.1984.1
Unique Name	prot_H-elongata_contig12672.1984.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	146

Homology

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BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Match: D7FH74_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH74_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 7.410e-34
Identity = 58/93 (62.37%), Postives = 75/93 (80.65%), Query Frame = 0

Query:    2 ARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRYQAIL 94
            ARVPLL  TW+P++ C LLLASK+WQDL SWN EFS  YP+Y +K+I++LE+ FL A++WD+++SSSLYAKYYFALRS +    FRRRY  +L
Sbjct:  208 ARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVL 300

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BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Match: A0A6H5JJI4_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI4_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 6.940e-33
Identity = 59/93 (63.44%), Postives = 75/93 (80.65%), Query Frame = 0

Query:    2 ARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRYQAIL 94
            ARVPLL  TW+P++ C LLLASK+WQDL SWN EFS  YP+Y +KSI++LE+ FL A++WD+++SSSLYAKYYFALRS +    FRRRY  +L
Sbjct:  456 ARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVL 548

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BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Match: A0A1E7FWS6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWS6_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.460e-30
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    2 ARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRYQAIL 94
            A+VPLL  TWRPI  CALLLASK+WQDL SWN EFS+ YP + ++SI+KLE+ FL  ++WDL +SSS YAKYYFALRS      FR+RY  ++
Sbjct:  181 AKVPLLACTWRPIFMCALLLASKVWQDLSSWNIEFSSVYPQFSLESINKLELNFLRNVKWDLYISSSSYAKYYFALRSLVEKQDFRQRYNRMV 273

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BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 122 bits (305), Expect = 9.830e-30
Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 0

Query:    2 ARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRYQAILLQVERDALLCDGVAKDKL 112
            A VPLL +TW+P++ C LLLASK+WQDL SWN EFS  YP++ ++SI++LE  +L  ++WDL +S+SLYAKYYFALRS +    FRRRY  +   V+ DA   D V +  L
Sbjct:  393 AAVPLLATTWKPVVLCGLLLASKVWQDLSSWNVEFSTVYPEFSLRSINRLEHVYLAQVQWDLYISASLYAKYYFALRSLAEGRDFRRRYNCV---VQIDAPRADRVQERSL 500

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BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Match: A0A7S1G1W2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G1W2_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.330e-29
Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 0

Query:    6 LLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRYQAIL 94
            LL + WRPI+ C +L+ASK+WQDL SWN EFS  YP Y + S+++LE  FL+ L WDL +S S+YAKYYFALRS S    FRRRY +++
Sbjct:   50 LLGTNWRPILLCGMLMASKVWQDLSSWNVEFSTVYPQYSLASVNRLERAFLQTLRWDLYISGSVYAKYYFALRSMSEKKNFRRRYISMM 138

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BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Match: A0A6U3CS23_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3CS23_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.750e-29
Identity = 53/96 (55.21%), Postives = 73/96 (76.04%), Query Frame = 0

Query:    3 RVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRYQAILLQVE 98
            +VPLL +TWRPI+   LLLASK+WQDL SWN EF+  YP Y ++++ +LE++FL  L+WDL +SSSLYAKYYFALR+      FR+RY  +++ V+
Sbjct:  159 KVPLLANTWRPIVMTGLLLASKVWQDLSSWNIEFTNVYPQYSLEAVHRLEIKFLRILQWDLYISSSLYAKYYFALRALVEKPDFRQRYNRMVVGVD 254

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BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Match: A0A7S4J8M4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J8M4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.020e-29
Identity = 55/93 (59.14%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    2 ARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRYQAIL 94
            ARVPL+ STWRP+  C LLLASK+WQDL SWN EF++ YP + +++I++LE  FL  ++WDL +SSSLYAKYYFALRS      FRRRY  ++
Sbjct:  982 ARVPLVSSTWRPVFMCGLLLASKVWQDLSSWNIEFASVYPQFSLEAINRLEATFLRTVKWDLYISSSLYAKYYFALRSLLEKQDFRRRYNRMV 1074

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BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Match: A0A7S3P0N5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P0N5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 7.210e-29
Identity = 54/93 (58.06%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    2 ARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRYQAIL 94
            A+VPLL STWRPI+ C LLLASK+WQDL SWN EF+  YP Y + +I +LE++FL  ++WDL +SS+LYAKYYFALR+      FR+RY  ++
Sbjct:  556 AKVPLLASTWRPIVMCGLLLASKVWQDLSSWNIEFATVYPQYSLNAIHRLELQFLRMVKWDLYISSTLYAKYYFALRALVSKQDFRQRYNRMV 648

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BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Match: A0A812XPB8_SYMMI (CCNY protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XPB8_SYMMI)

HSP 1 Score: 115 bits (289), Expect = 2.310e-28
Identity = 58/122 (47.54%), Postives = 81/122 (66.39%), Query Frame = 0

Query:    2 ARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRYQAILLQV---ERDALLCDGVAKDKLLPSRIFPS 120
            A VPL   TWRP++ C LLLASK+WQDL SWN E +  YP + +++I++LE  F   ++WDL +SSSLYAKYYFALRS +    FRR Y  ++LQ    E+ A+  + V K+ +L + +  S
Sbjct:  220 ANVPLTSKTWRPVVMCGLLLASKVWQDLSSWNIEIAQIYPQFTLQNINRLERTFCHHIKWDLYISSSLYAKYYFALRSLTEKSDFRRNYNTMVLQAPGAEQVAIRSENV-KETMLHTTLSKS 340

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BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Match: A0A484E3M4_BRELC (Cyclin N-terminal domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3M4_BRELC)

HSP 1 Score: 116 bits (291), Expect = 2.390e-28
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0

Query:    2 ARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDKLEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRY 90
            A VPLL +TWRPI+ C LLLASK+WQDL SWN E S  YP + ++SI++LE  FL  ++WDL +S+S+YAKYYFALRS +    FRRRY
Sbjct:  268 ANVPLLAATWRPIVVCGLLLASKVWQDLSSWNVEISNIYPQFSLQSINRLERLFLHHIQWDLYISASVYAKYYFALRSLTEKKDFRRRY 356

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot

BLAST of mRNA_H-elongata_contig12672.1984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FH74_ECTSI	7.410e-34	62.37	Cyclin N-terminal domain-containing protein n=1 Ta...	[more]
A0A6H5JJI4_9PHAE	6.940e-33	63.44	Cyclin N-terminal domain-containing protein n=1 Ta...	[more]
A0A1E7FWS6_9STRA	1.460e-30	61.29	Uncharacterized protein n=1 Tax=Fragilariopsis cyl...	[more]
A0A835YNR4_9STRA	9.830e-30	53.15	Cyclin N-terminal domain-containing protein n=1 Ta...	[more]
A0A7S1G1W2_9STRA	2.330e-29	57.30	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]
A0A6U3CS23_9STRA	2.750e-29	55.21	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A7S4J8M4_9STRA	6.020e-29	59.14	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S3P0N5_9STRA	7.210e-29	58.06	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A812XPB8_SYMMI	2.310e-28	47.54	CCNY protein n=1 Tax=Symbiodinium microadriaticum ...	[more]
A0A484E3M4_BRELC	2.390e-28	60.67	Cyclin N-terminal domain-containing protein n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14248	FAMILY NOT NAMED	coord: 2..94
None	No IPR available	PANTHER	PTHR14248:SF37		coord: 2..94
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..30 score: 0.468
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 3..65

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig12672	contig	H-elongata_contig12672:2046..3120 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig12672.1984.1	mRNA_H-elongata_contig12672.1984.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig12672 2046..3520 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig12672.1984.1 ID=prot_H-elongata_contig12672.1984.1|Name=mRNA_H-elongata_contig12672.1984.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MARVPLLESTWRPIIFCALLLASKMWQDLGSWNGEFSAAYPDYKVKSIDK
LEMRFLEALEWDLNVSSSLYAKYYFALRSKSGAIPFRRRYQAILLQVERD
ALLCDGVAKDKLLPSRIFPSTHSENDDPWTSRAQDGNGAMLSRSL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036915	Cyclin-like_sf