prot_H-elongata_contig126653.1982.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig126653.1982.1
Unique Name	prot_H-elongata_contig126653.1982.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	99

Homology

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BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Match: D7FKE1_ECTSI (AP-1 complex subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE1_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 9.390e-49
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0

Query:    1 EPNIRYLGLEVMSRLARLEGNETAKKHRTTVVMSLKDADISIRRRALDLLFVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW 98
            EPNIRYLGLEVMSRLARLEGNETAKKH+ TV+MSLKDADISIRRRALDLLFVMADE+N  EIVEELVTYLAAS AAIREEMVLKIAILAEKFTDDLNW
Sbjct:  350 EPNIRYLGLEVMSRLARLEGNETAKKHQATVLMSLKDADISIRRRALDLLFVMADETNGAEIVEELVTYLAASGAAIREEMVLKIAILAEKFTDDLNW 447

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BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Match: A0A6H5L7E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E0_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 4.480e-48
Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0

Query:    1 EPNIRYLGLEVMSRLARLEGNETAKKHRTTVVMSLKDADISIRRRALDLLFVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW 98
            EPNIRYLGLEVMSRLARLEGNETAKKH+ TV+MSLKDADISIRRRALDLLFVMADE+N  EIVEELVTYLAAS AAIREEMVLKIAILAEKFTDDLNW
Sbjct:  354 EPNIRYLGLEVMSRLARLEGNETAKKHQATVLMSLKDADISIRRRALDLLFVMADETNGAEIVEELVTYLAASGAAIREEMVLKIAILAEKFTDDLNW 451

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BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Match: A0A836C8G3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G3_9STRA)

HSP 1 Score: 154 bits (390), Expect = 6.880e-42
Identity = 79/98 (80.61%), Postives = 89/98 (90.82%), Query Frame = 0

Query:    1 EPNIRYLGLEVMSRLARLEGNETAKKHRTTVVMSLKDADISIRRRALDLLFVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW 98
            EPNIRYLGLE MSRLARLEGNE+ K+H+ TV++SLKDADIS+RRRALDLLFV++D  NA EIVEEL+ YLA SDAAIREEMVLKIAILAEKFT+DL W
Sbjct:  376 EPNIRYLGLETMSRLARLEGNESIKRHKATVMVSLKDADISMRRRALDLLFVISDRDNAVEIVEELMAYLALSDAAIREEMVLKIAILAEKFTNDLRW 473

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BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Match: A0A7S1BCA8_9STRA (AP-2 complex subunit alpha n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCA8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.860e-35
Identity = 72/99 (72.73%), Postives = 83/99 (83.84%), Query Frame = 0

Query:    1 EPNIRYLGLEVMSRLARLEGN-ETAKKHRTTVVMSLKDADISIRRRALDLLFVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW 98
            EPNIRYLGL  M+RLA+LEG+ E+ KKH+ TV++SLKDADIS+RRRALDLLFVM D  NA +IV ELV YL  +DAAIREEMVLKIAILAEK+  DL W
Sbjct:  343 EPNIRYLGLMTMARLAQLEGSAESVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAEKIVNELVVYLTVADAAIREEMVLKIAILAEKYATDLKW 441

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BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Match: A0A7S2PNC4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PNC4_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.010e-34
Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0

Query:    1 EPNIRYLGLEVMSRLARLEGN-ETAKKHRTTVVMSLKDADISIRRRALDLLFVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW 98
            EPNIRYLGL  M+RLA+LEG+ ++ KKH+ TV++SLKDADIS+RRRALDLLFVM D  NA +IV+ELV +L  +DAAIREEMVLKIAILAEK+  DL W
Sbjct:   72 EPNIRYLGLMTMARLAQLEGSGQSVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAEQIVDELVAHLVNADAAIREEMVLKIAILAEKYATDLRW 170

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BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Match: A0A1Z5K119_FISSO (AP-2 complex subunit alpha n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K119_FISSO)

HSP 1 Score: 133 bits (334), Expect = 4.700e-34
Identity = 70/99 (70.71%), Postives = 83/99 (83.84%), Query Frame = 0

Query:    1 EPNIRYLGLEVMSRLARLEGN-ETAKKHRTTVVMSLKDADISIRRRALDLLFVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW 98
            EPNIRYLGL  M++LA+LEG+ E+ KKH+ TV++SLKDADIS+RRRALDLLFVM D  NA  IV+ELV +L  +DAAIREEMVLKIAILAEK+  DL W
Sbjct:  421 EPNIRYLGLMTMAKLAQLEGSGESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVIADAAIREEMVLKIAILAEKYATDLRW 519

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BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Match: B7FY75_PHATC (AP-2 complex subunit alpha n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY75_PHATC)

HSP 1 Score: 132 bits (332), Expect = 8.730e-34
Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0

Query:    1 EPNIRYLGLEVMSRLARLEGN-ETAKKHRTTVVMSLKDADISIRRRALDLLFVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW 98
            EPNIRYLGL  M++LA+LEG+ E+ KKH+ TV++SLKDADIS+RRRALDLLFVM D  NA  IV+EL+ +LA +DAAIREEMVLKIAILAEK+  DL W
Sbjct:  399 EPNIRYLGLMTMAKLAQLEGSAESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAELIVDELIGHLALADAAIREEMVLKIAILAEKYATDLRW 497

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BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Match: A0A7S1Y9P9_9STRA (AP-2 complex subunit alpha n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9P9_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.190e-33
Identity = 69/99 (69.70%), Postives = 83/99 (83.84%), Query Frame = 0

Query:    1 EPNIRYLGLEVMSRLARLEGN-ETAKKHRTTVVMSLKDADISIRRRALDLLFVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW 98
            EPNIRYLGL  M++LA+L+G+ E+ KKH+ TV++SLKDADIS+RRRALDLLFVM D  NA  IV+ELV +L  +DAAIREEMVLKIAILAEK+  DL W
Sbjct:  314 EPNIRYLGLMTMAKLAQLDGSAESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVLADAAIREEMVLKIAILAEKYATDLRW 412

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BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Match: A0A1E7FR64_9STRA (AP-2 complex subunit alpha n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FR64_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.620e-33
Identity = 70/99 (70.71%), Postives = 83/99 (83.84%), Query Frame = 0

Query:    1 EPNIRYLGLEVMSRLARLEGN-ETAKKHRTTVVMSLKDADISIRRRALDLLFVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW 98
            EPNIRYLGL  M++LA+LEG  E+ KKH++TV++SLKDADIS+RRRAL LLFVM D  NA  IV+ELV +LA +DAAIREEMVLKIAILAEK+  DL W
Sbjct:  366 EPNIRYLGLLTMAKLAQLEGTAESIKKHQSTVLVSLKDADISVRRRALGLLFVMCDTDNAERIVDELVAHLALADAAIREEMVLKIAILAEKYATDLRW 464

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BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Match: A0A7S2ULM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULM5_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.890e-33
Identity = 69/99 (69.70%), Postives = 80/99 (80.81%), Query Frame = 0

Query:    1 EPNIRYLGLEVMSRLARLE-GNETAKKHRTTVVMSLKDADISIRRRALDLLFVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW 98
            EPNIRYLGL  M+RLA++E   E  KKH+ TV++SLKDADIS+RRRALDLLFVM D  NA  IV+ELV +L  +DAAIREEMVLKIAILAEK+  DL W
Sbjct:  369 EPNIRYLGLMTMARLAQIETSGEGIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVVADAAIREEMVLKIAILAEKYATDLRW 467

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot

BLAST of mRNA_H-elongata_contig126653.1982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKE1_ECTSI	9.390e-49	92.86	AP-1 complex subunit gamma n=1 Tax=Ectocarpus sili...	[more]
A0A6H5L7E0_9PHAE	4.480e-48	92.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836C8G3_9STRA	6.880e-42	80.61	AP-1 complex subunit gamma n=1 Tax=Tribonema minus...	[more]
A0A7S1BCA8_9STRA	2.860e-35	72.73	AP-2 complex subunit alpha n=1 Tax=Corethron hystr...	[more]
A0A7S2PNC4_9STRA	2.010e-34	70.71	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
A0A1Z5K119_FISSO	4.700e-34	70.71	AP-2 complex subunit alpha n=2 Tax=Fistulifera sol...	[more]
B7FY75_PHATC	8.730e-34	70.71	AP-2 complex subunit alpha n=3 Tax=Phaeodactylum t...	[more]
A0A7S1Y9P9_9STRA	1.190e-33	69.70	AP-2 complex subunit alpha n=1 Tax=Grammatophora o...	[more]
A0A1E7FR64_9STRA	1.620e-33	70.71	AP-2 complex subunit alpha n=2 Tax=Bacillariaceae ...	[more]
A0A7S2ULM5_9STRA	1.890e-33	69.70	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 2..98 e-value: 1.4E-22 score: 80.0
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..98 e-value: 9.6E-35 score: 121.9
None	No IPR available	PANTHER	PTHR22780	ADAPTIN, ALPHA/GAMMA/EPSILON	coord: 1..98
None	No IPR available	PANTHER	PTHR22780:SF4	AP-2 COMPLEX SUBUNIT ALPHA	coord: 1..98
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 2..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig126653	contig	H-elongata_contig126653:160..1690 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig126653.1982.1	mRNA_H-elongata_contig126653.1982.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig126653 160..1690 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig126653.1982.1 ID=prot_H-elongata_contig126653.1982.1|Name=mRNA_H-elongata_contig126653.1982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
EPNIRYLGLEVMSRLARLEGNETAKKHRTTVVMSLKDADISIRRRALDLL
FVMADESNATEIVEELVTYLAASDAAIREEMVLKIAILAEKFTDDLNW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002553	Clathrin/coatomer_adapt-like_N
IPR011989	ARM-like
IPR016024	ARM-type_fold