prot_H-elongata_contig99459.17278.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99459.17278.1
Unique Nameprot_H-elongata_contig99459.17278.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length94
Homology
BLAST of mRNA_H-elongata_contig99459.17278.1 vs. uniprot
Match: D8LDF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF5_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 2.050e-33
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    1 RITLSARWKVNFLDGTSLLYRGDVVQDTA--GTPVIFDADSGAVSMGAPASQLPDAHIRGEVLLPTTNVQGTLSERQIGEFEADLVELPTDDDRM 93
            RITLSARW VNF DGT+LLYRGDVVQD    GT +  D  SGA +MG PA + PDAHIRGEVL P  N+QG+L+E++IGEFEADL+ELP+DDD++
Sbjct:  257 RITLSARWSVNFTDGTTLLYRGDVVQDAEAQGTALTVDT-SGAAAMGGPAFERPDAHIRGEVLRPVKNIQGSLTEKKIGEFEADLIELPSDDDKL 350          
BLAST of mRNA_H-elongata_contig99459.17278.1 vs. uniprot
Match: A0A835Z999_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z999_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 4.620e-14
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    1 RITLSARWKVNFLDGT-SLLYRGDVVQDTAGTPVIFDADSGAVSMGAPASQLPDAHIRGEVLLPTTNVQGTLSERQIGEFEADLVELPTDDDRM 93
            +I  SARWKV +  G  S LYRGDVV D+  T            + A  +  PDAHIRGEVL P     G+L E+ IGEFEADL+++  D+D++
Sbjct:  121 KILFSARWKVTYKGGGGSFLYRGDVVLDSTET------------LHAAGNPHPDAHIRGEVLKPFKGRTGSLQEKHIGEFEADLLQVDKDEDKL 202          
BLAST of mRNA_H-elongata_contig99459.17278.1 vs. uniprot
Match: W7TK28_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TK28_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 6.160e-10
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 0
Query:    1 RITLSARWKVNFLDGTSLLYRGDVVQDTAGTPVIFDADSGAVSMGAPASQLPDAHIRGEVLLPTTNVQGTLSERQIGEFEADLVELPTDDDRM 93
            +I  SARWKV F DG SL+YRGDV+             +G     A AS + D    GE+L P T + G LSE+++G FEADL+++  D++++
Sbjct:  191 QIRFSARWKVRFSDGESLIYRGDVL-------------AGGNYAKASAS-ITD----GEILKPFTGITGNLSEKKVGTFEADLIQVSDDEEKL 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99459.17278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDF5_ECTSI2.050e-3367.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z999_9STRA4.620e-1445.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TK28_9STRA6.160e-1040.86Uncharacterized protein n=4 Tax=Monodopsidaceae Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99459contigH-elongata_contig99459:2006..2287 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99459.17278.1mRNA_H-elongata_contig99459.17278.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99459 2006..2287 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99459.17278.1 ID=prot_H-elongata_contig99459.17278.1|Name=mRNA_H-elongata_contig99459.17278.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=94bp
RITLSARWKVNFLDGTSLLYRGDVVQDTAGTPVIFDADSGAVSMGAPASQ
LPDAHIRGEVLLPTTNVQGTLSERQIGEFEADLVELPTDDDRM*
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