mRNA_H-elongata_contig9894.17239.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Match: A0A2E1VUF3_9BACT (DUF218 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E1VUF3_9BACT) HSP 1 Score: 93.2 bits (230), Expect = 7.600e-21 Identity = 54/128 (42.19%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 1 FALEHLISNWENLGNFKEAFAEMDLEEMRKAVEPTFVTEGEFLRLRSKNTRQELIEAGRLFRKGRCDRIILVSSPTHLPRCLRDACRAGDRWR-RQWRPVVLASPSDTSFVDFGPDDVAIIEPPHRPD 381
+ L++L+ +++ L +F AF ++DLE +R+ +E T V E RS+NTR+E++EA F + +R+ILVSSPTH+ RC+RDA A + R + R + A+PSD+S++ +DV I EPPHR D
Sbjct: 73 YTLDYLLQHFDELADFP-AFGKVDLEALRRQIESTAVAES-----RSQNTREEVVEAAEHFLERGVERMILVSSPTHISRCVRDAYSALESARFARLRHQLFATPSDSSYLGSRAEDVVIFEPPHRAD 194
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Match: A0A7S0Y436_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y436_HEMAN) HSP 1 Score: 92.0 bits (227), Expect = 5.430e-20 Identity = 58/130 (44.62%), Postives = 73/130 (56.15%), Query Frame = 1
Query: 1 FALEHLISNWENLGNFKEAFAEMDLEEMRKAVEPTFVTEGEFLRLRSKNTRQELIEAGRLFRKGRCDRIILVSSPTHLPRCLRDACRAGDRWRRQ---WRPVVLASPSDTSFVDFGPDDVAIIEPPHRPD 381
F ++ N++ L F + FA DLE + + + V E SKNT +EL AG + RK +R+ILVSSPTHLPRCLRDAC R + W VL SPS TS+ DVA+IEPPHR D
Sbjct: 115 FTRDYFFENFQKLARF-DVFAGADLERLERLMRERSVAETV-----SKNTVEELELAGEILRKHNVERLILVSSPTHLPRCLRDACVVYGTVRSEKCPWGARVLVSPSGTSYEGASAGDVAVIEPPHRGD 238
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Match: A0A7V7MMY6_9BACT (DUF218 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V7MMY6_9BACT) HSP 1 Score: 87.4 bits (215), Expect = 1.250e-18 Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 1 FALEHLISNWENLGNFKEAFAEMDLEEMRKAVEPTFVTEGEFLRLRSKNTRQELIEAGRLFRKGRCDRIILVSSPTHLPRCLRDACRA--GDRWRRQWRPVVLASPSDTSFVDFGPDDVAIIEPPHRPD 381
+ L L+ +E L FK AF +DL +RK VE V + + S NT QE+ A R+F + + ++LVSSPTHLPRCLRDAC A G+ +R R +LA+PSD+ ++ ++V I EPPHR D
Sbjct: 73 YTLGFLLRRFEELAEFK-AFEGVDLAALRKRVEGIAVADVD-----SMNTEQEVRNAARMFLRQGIEGMVLVSSPTHLPRCLRDACAALVGEEFR-SLRQHLLATPSDSCYLGSRAENVVIFEPPHRAD 194
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Match: A0A7S0HX73_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HX73_9CRYP) HSP 1 Score: 86.3 bits (212), Expect = 1.880e-18 Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 7 LEHLISNWENLGNFKEAFAEMDLEEMRKAVEPTFVTEGEFLRLRSKNTRQELIEAGRLFRKGRCDRIILVSSPTHLPRCLRDACRAGDRWRRQWRPVVLASPSDTSFVDFGPDDVAIIEPPHRPD 381
++ + N+E L NFK+ F ++DL +R+ + E +S NT QEL G + + +IILVSSPTHLPRC+RDA + D + + + A PSDT +++ +DVAI+EPPHR D
Sbjct: 46 MQFMFENFERLKNFKQ-FQDIDLGRLRERMAEICKVE-----TKSLNTLQELEMCGEIMHNQQVQKIILVSSPTHLPRCIRDAKKVFDGSKFSFANAIFACPSDTCYMNSTVEDVAIVEPPHRGD 164
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Match: A0A7S0V9E4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V9E4_9CRYP) HSP 1 Score: 88.2 bits (217), Expect = 2.320e-18 Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 1 FALEHLISNWENLGNFKEAFAEMDLEEMRKAVEPTFVTEGEFLRLRSKNTRQELIEAGRLFRKGRCDRIILVSSPTHLPRCLRDACRAGDRWRRQ---WRPVVLASPSDTSFVDFGPDDVAIIEPPHRPD 381
F ++L+ N++ L F FA +DL + + + V E S+NT +EL + R+ R +R+ILVSSPTHLPRCLRDAC R + W +L PS TS+ P+DVA++EPPHR D
Sbjct: 149 FTRDYLLENFQRLALFN-VFAGIDLGRLERLMRERSVAE-----TTSRNTVEELERGADILREHRIERLILVSSPTHLPRCLRDACVVYGTARSERFPWAARLLVCPSGTSYTGAKPEDVAVVEPPHRGD 272
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Match: A0A7S0YME2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YME2_9CRYP) HSP 1 Score: 87.4 bits (215), Expect = 7.000e-18 Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 1
Query: 1 FALEHLISNWENLGNFKEAFAEMDLEEMRKAVEPTFVTEGEFLRLRSKNTRQELIEAGRLFRKGRCDRIILVSSPTHLPRCLRDACRAGDRWRRQ---WRPVVLASPSDTSFVDFGPDDVAIIEPPHR 375
F ++L+ N++ L F FA +DL + + + V E S+NT +EL + R+ R +R+ILVSSPTHLPRCLRDAC R + W +L PS TS+ P+DVA++EPPHR
Sbjct: 149 FTRDYLLENFQRLALFN-VFAGIDLGRLERLMRERSVAE-----TTSRNTVEELERGADILREHRIERLILVSSPTHLPRCLRDACVVYGTARSERFPWAARLLVCPSGTSYTGAKPEDVAVVEPPHR 270
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Match: A0A7S0MPU1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MPU1_9CRYP) HSP 1 Score: 82.0 bits (201), Expect = 1.610e-17 Identity = 51/121 (42.15%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 1 FALEHLISNWENLGNFKEAFAEMDLEEMRKAVEPTFVTEGEFLRLRSKNTRQELIEAGRLFRKGRCDRIILVSSPTHLPRCLRDACRAGDRWRRQWRPVVLASPSDTSFVDFGPDDVAIIE 363
+ L L N+ L F+ FA++DLE+ + + E E S NT EL++ G + + CDR+ILVSSPTHLPRCLRDAC + R ++ VLA SDT + P DVAI+E
Sbjct: 17 YTLRFLQRNFRRLKEFR-LFADIDLEQAEARMRRYAMAEVE-----SANTTDELLKCGDVLSRAGCDRVILVSSPTHLPRCLRDACCIFQKARFRFSGWVLACASDTCYAGAVPGDVAIVE 131
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Match: A0A6L8DJG4_9BACT (DUF218 domain-containing protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6L8DJG4_9BACT) HSP 1 Score: 81.3 bits (199), Expect = 3.870e-16 Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 139 SKNTRQELIEAGRLFRKGRCDRIILVSSPTHLPRCLRDACR--AGDRWRRQWRPVVLASPSDTSFVDFGPDDVAIIEPPHRPD 381
SKNTR E+ AGR+F +R++LVSSPTHLPRCLRDAC D + A+PS T + + DDVAI EPPHRPD
Sbjct: 132 SKNTRDEIAHAGRVFVDRNVERVVLVSSPTHLPRCLRDACAIYGEDGDLSGLLRELYAAPSVTGYPGYTADDVAIFEPPHRPD 214
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Match: A0A800IHU9_9BACT (DUF218 domain-containing protein n=2 Tax=FCB group TaxID=1783270 RepID=A0A800IHU9_9BACT) HSP 1 Score: 80.9 bits (198), Expect = 4.690e-16 Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 139 SKNTRQELIEAGRLFRKGRCDRIILVSSPTHLPRCLRDACRA--GDRWRRQWRPVVLASPSDTSFVDFGPDDVAIIEPPHRPD 381
S+NT E+ AG +F+ ++IILVSSPTHLPRCLRDAC A DR +R + ASPS T ++ DVAI EPPHRPD
Sbjct: 123 SQNTVDEVTRAGHIFKDHDVEQIILVSSPTHLPRCLRDACVAFDNDRELSHFRYWLSASPSITGYMGRSAADVAIFEPPHRPD 205
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Match: A0A7X3WAK7_9BACT (DUF218 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3WAK7_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 1.490e-15 Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 136 RSKNTRQELIEAGRLFRKGRCDRIILVSSPTHLPRCLRDACR--AGDRWRRQWRPVVLASPSDTSFVDFGPDDVAIIEPPHRPD 381
+SKNTR E+ AGR+F +R+ILVSSPTHLPRCLRDAC D + A+PS T + + +DVAI EPPHRPD
Sbjct: 131 KSKNTRDEIAYAGRVFVDRDVERVILVSSPTHLPRCLRDACAIYGEDGGMSGLLRELYAAPSVTGYPGYTAEDVAIFEPPHRPD 214 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9894.17239.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9894.17239.1 >prot_H-elongata_contig9894.17239.1 ID=prot_H-elongata_contig9894.17239.1|Name=mRNA_H-elongata_contig9894.17239.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp FALEHLISNWENLGNFKEAFAEMDLEEMRKAVEPTFVTEGEFLRLRSKNTback to top mRNA from alignment at H-elongata_contig9894:7386..8368- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9894.17239.1 ID=mRNA_H-elongata_contig9894.17239.1|Name=mRNA_H-elongata_contig9894.17239.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=983bp|location=Sequence derived from alignment at H-elongata_contig9894:7386..8368- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9894:7386..8368- >mRNA_H-elongata_contig9894.17239.1 ID=mRNA_H-elongata_contig9894.17239.1|Name=mRNA_H-elongata_contig9894.17239.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig9894:7386..8368- (Himanthalia elongata Himel1 dioecious)back to top |