prot_H-elongata_contig9876.17217.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9876.17217.1
Unique Nameprot_H-elongata_contig9876.17217.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length235
Homology
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Match: A0A6H5KTE1_9PHAE (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTE1_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 1.470e-118
Identity = 178/231 (77.06%), Postives = 201/231 (87.01%), Query Frame = 0
Query:    1 QVTSLSRRGAPSPENNPVSGVTFLQGDATDPAVLQRVIQDG--DYDGVVHAVGMLFASSLNRFVSGSGSIPESGTTYDKITRETAFAATAALDDLARGGPQ-RPFVFISAAEAKWNFDGIFSATPVAWLHDYLVAKRAAEDEAGRLLNNKPSLRGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAVAGLLDGSVSGVQDWRKMEELSSAYISNK 228
            +VTSLSRRG PSP+++P+ GV FL+GDATDPAV+++VI DG  DYDGVVHAVGMLFA SLNRF SGSGS+P+ GTTYDKITR+TAFAATAALD LA+GG Q RPFVFISAAEAKW FDGIF  +PV +LHDYLVAKRA EDE   LLNNKPSLRG+VLRPSLVWT +RPGALLPVAAFQIGSRLG+PFIDRPV+VETLA AAV  L D SV GVQDWR ME+L+ +Y +NK
Sbjct:   47 EVTSLSRRGTPSPDSDPLPGVNFLKGDATDPAVVRQVINDGKCDYDGVVHAVGMLFAGSLNRFASGSGSVPDPGTTYDKITRQTAFAATAALDALAQGGSQQRPFVFISAAEAKWGFDGIFEGSPVGFLHDYLVAKRAVEDE---LLNNKPSLRGVVLRPSLVWTKRRPGALLPVAAFQIGSRLGLPFIDRPVHVETLASAAVEALFDSSVRGVQDWRGMEKLAGSYKANK 274          
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Match: A0A835YPV7_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV7_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.000e-70
Identity = 121/220 (55.00%), Postives = 156/220 (70.91%), Query Frame = 0
Query:    2 VTSLSRRGAPSPENNPVSGVTFLQGDATDPAVLQRVIQDGDYDGVVHAVGMLFASSLNRFVSGSGSIPESGTTYDKITRETAFAAT-AALDDLARGGPQRPFVFISAAEAKWNFDGIFSATPVAWLHDYLVAKRAAEDEAGRLLNNKPSLRGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAVAGLLDGSVSGVQDWRKMEEL 220
            VTSLSRRG     ++    +T+L+GDA+D   + RV+Q+G++D VVHA+GML  +SLNRF SGSGS+P  G TYD++TR+T FAA  A + +   G P  PFVF+SAAEA W  D +F  TP+A+L  YLVAKRAAE+   RLL++  +LR  VLRPSLVWT +RP AL  V+AF   + +GIPFIDRPV+V TLA AAV  L D S SG Q+++ ME L
Sbjct:   61 VTSLSRRGRLDDADD---RITWLEGDASDAGTVARVVQEGEFDAVVHAIGMLLDNSLNRFASGSGSVPGEGATYDQVTRQTVFAAADAVVSNRKAGQPPTPFVFVSAAEAAWTKDALFEGTPLAFLRRYLVAKRAAEE---RLLSDARNLRATVLRPSLVWTKERPAALPAVSAFTAANAIGIPFIDRPVSVTTLAAAAVEALEDASCSGTQNYKGMERL 274          
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Match: L1I751_GUITC (Epimerase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I751_GUITC)

HSP 1 Score: 212 bits (540), Expect = 2.540e-65
Identity = 107/227 (47.14%), Postives = 151/227 (66.52%), Query Frame = 0
Query:    1 QVTSLSRRGAPS--PENNPVSGVTFLQGDATDPAVLQRVIQDGDYDGVVHAVGMLFASSLNRFVSGSGSIPESGTTYDKITRETAF-AATAALDDLARGGPQRPFVFISAAEAKWNFDGIFSATPVAWLHDYLVAKRAAEDEAGRLLNNKPSLRGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAVAGLLDGSVSGVQDWRKMEELSSAY 224
            +V +LSRRG P+    +   S + + +GDAT  A +++V+++G +  VVHA+GMLF + LN++ SGSGS+P +G+TYD+ITR+TAF A  AA    +      PF F+SAAE +W FD  F  TP+ WL  YL+AKRA E E   +      L+ I++RPSL+WT  RPGALLPVAAF  G+RLG+PF+D+PV V TL++A + GL   S  GV ++  ME L+  +
Sbjct:   41 EVVALSRRGEPTGASRSGAASKIAWRKGDATKKADIEKVMEEGGFTAVVHAIGMLFETELNKYASGSGSVPRAGSTYDEITRQTAFNAMEAAASSSSASSDPIPFAFVSAAEVRWTFDKSFEGTPLDWLRRYLIAKRAVESELIDVYGAGGLLKPIIVRPSLIWTWDRPGALLPVAAFTFGNRLGLPFVDKPVQVSTLSKAILKGLESKSEKGVYNFEGMERLAKEF 267          
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Match: A0A7S0QX38_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QX38_9CHLO)

HSP 1 Score: 183 bits (464), Expect = 4.730e-53
Identity = 107/229 (46.72%), Postives = 147/229 (64.19%), Query Frame = 0
Query:    2 VTSLSRRGAPSPENNPVSGVTFLQGDAT-DPAVLQRVIQDGDYDGVVHAVGMLFASSLNRFVSGSGSIPESGTTYDKITRETAFAATAALDDLARG---GPQRPFVFISAAEAKWNFDGIFSATPVAWLHDYLVAKRAAEDEAGRLLNN---KPSLRGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAVAGLLDGSVSGVQDWRKMEELSSA 223
            V S+SRRG     +  + GV + +GD   DPA++  ++ +G +DGV+HA+GML  S  N+F SGSGS+P  G+TYD++TR+TA AA +A      G       PFVF+SAAEA W  D      PV +L  YL AKRA EDE   LLNN       R ++LRPSLV+++ R  +L  V AF +G+ L +P IDRPV VETLA+AA+  + D SV+GVQ++  ME+L++A
Sbjct:  114 VVSVSRRGLVEGSDQ-LKGVDWRKGDVVADPAIVAHILSEGGFDGVMHAIGMLLESDANKFASGSGSVPTPGSTYDQVTRQTALAAASAFSAACEGTDASSPPPFVFVSAAEAGWTQD-----PPVPFLVSYLKAKRAVEDE---LLNNYGASNKFRPVILRPSLVYSMDRTASLPAVGAFFLGNMLKLPGIDRPVLVETLAKAALKAMEDESVAGVQNFEAMEDLAAA 333          
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Match: C1N367_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N367_MICPC)

HSP 1 Score: 182 bits (463), Expect = 6.170e-53
Identity = 105/241 (43.57%), Postives = 146/241 (60.58%), Query Frame = 0
Query:    2 VTSLSRRGAPS-----PENNPVSGVTFLQGDATDPAVLQRVIQDGDYDGVVHAVGMLFASSLNRFVSGSGSIPESGTTYDKITRETAFAATAALDDLAR----------------GGPQRPFVFISAAEAKWNFDGIFSATPVAWLHDYLVAKRAAEDEAGRLLNNKPSLRGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAVAGLLDGSVSGVQDWRKMEELS 221
            V S+SRRGAPS     P ++    V +  GD T P+ ++ V+ +G + G VHAVGML AS LN + SGSGS+P +G+TYD +TR++AF A  A+ +L +                     PFVF+SAAEAKW+F       PV WL +YLVAKRA E++ G +     +LR  +LRPSLV+   +P +   VAAF IG+ +G+PF+DRPV    LA AAV  + + +V G+ D+  +EELS
Sbjct:   85 VVSISRRGAPSASARGPTSSLDGRVDWRVGDVTLPSTVRDVLAEGGFVGCVHAVGMLLASDLNAYASGSGSVPSAGSTYDDVTRKSAFHAADAVAELVKPVDFTSASDGTRIYTTSKRSPPFVFVSAAEAKWDF-----RAPVEWLEEYLVAKRAVEEKLGAM-TAAGALRATILRPSLVYAFDKPASFPAVAAFVIGNAIGLPFVDRPVTAGALATAAVRAVKEEAVEGILDYVGIEELS 319          
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Match: C1E365_MICCC (Epimerase domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E365_MICCC)

HSP 1 Score: 171 bits (432), Expect = 1.710e-48
Identity = 103/241 (42.74%), Postives = 133/241 (55.19%), Query Frame = 0
Query:    2 VTSLSRRGAP--SPENNPV---SGVTFLQGDATDPAVLQRVIQDGDYDGVVHAVGMLFASSLNRFVSGSGSIPESGTTYDKITRETAFAATAALDDLARGGPQR-----------------PFVFISAAEAKWNFDGIFSATPVAWLHDYLVAKRAAEDEAGRLLNNKPSLRGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAVAGLLDGSVSGVQDWRKMEEL 220
            V S+SRRG P   P   P    + V + +GD   P  +  V+ +G +   +HAVGML AS +N   SGSGS P  G TYD +TR TA  A  A   L    P                   PFVF+SAAEA+W F       PVAWL DYL+AKRA E    R + +   +R   LRPSLV+ + +P A+  V AF +G+ LG+PF+DRPV V+TLA AAV  + DG  +G  D+R+ME L
Sbjct:   76 VVSISRRGDPPGDPHRYPDGVWNRVDWRKGDCVQPDTIATVLGEGGFVACIHAVGMLLASDINALASGSGSKPSPGATYDDVTRVTALNAADAAARLCTAVPNADTAGGGGTGGTTSKAPVPFVFVSAAEARWTFKA-----PVAWLEDYLIAKRAVEARL-REMTDAGEVRAACLRPSLVYCLDKPAAMPAVGAFYLGNLLGLPFVDRPVTVDTLASAAVRCVEDGRSTGALDYREMERL 310          
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Match: A0A7S3QJZ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJZ9_9STRA)

HSP 1 Score: 166 bits (421), Expect = 7.340e-47
Identity = 102/235 (43.40%), Postives = 148/235 (62.98%), Query Frame = 0
Query:    2 VTSLSRRGAPS--PENNPVSGVTFLQGDATDPAVLQRVIQDGDYDGVVHAVGMLFAS-----SLNRFVSGSGSIPESGTTYDKITRETAFAATAALDDLA--RGGPQRPFVFISAAEAKWNF--DGIF---SATPVAWLHDYLVAKRAAEDEAGRLLNNKPSL-RGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAVAGLLDGSVSGVQDWRKMEELS 221
            VTSLSRRG P   P++     + +  GDA +  V++ ++ +GDY  + H +G+L        S NRFVSGSGS+PE   TYD+ITR TAF A AA +     RGG   PF+F SAAEA W     G F   + TP  WL  YL AKR+ E+   RL+N+  +L R ++ RPSL++++ +  +L P  AF +G+R+G+PF+DRPV+V+TL+ AAV  +    V GVQ ++++++LS
Sbjct:   83 VTSLSRRGKPEKDPKDFTNDKIDYRIGDARESLVIENILDEGDYTAIFHCIGILLDGDSGLRSFNRFVSGSGSVPEENATYDEITRLTAFNAIAAAESYVSKRGGGPLPFIFTSAAEAGWPDVRGGKFVERTLTP-RWLKRYLEAKRSVEN---RLMNSPQTLLRPVIFRPSLIYSLDKIASLPPWGAFFVGNRVGLPFVDRPVSVQTLSTAAVRSI-SKEVRGVQRFKEIDQLS 312          
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Match: B8CE04_THAPS (NAD(P)-bd_dom domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE04_THAPS)

HSP 1 Score: 165 bits (417), Expect = 1.280e-46
Identity = 97/235 (41.28%), Postives = 140/235 (59.57%), Query Frame = 0
Query:    1 QVTSLSRRGA-PSPENNPVSGVTFLQGDATDPAVLQRVIQDGDYDGVVHAVGMLF-----ASSLNRFVSGSGSIPESGTTYDKITRETAFAATAALD-----DLARGGPQRPFVFISAAEAKWN---FDGIFSATPVAWLHDYLVAKRAAEDEAGRLLNNKPSLRGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAVAGLLDGSVSGVQDWRKMEELS 221
            QVT++SRRG  P PE+  +S V ++QGDAT+  +++ V++D D    VHA+G+LF       +LN+ VSGSGSIP+S +TYD ITR TAF     ++     ++ +G  + P  F+SAAEA W              +WL+ YL AKRA E+        K ++R  + RPSL+W   +   L  +  F + S +GIPF+D+ V VETLA + VAG+  G V GVQ + +ME+LS
Sbjct:   46 QVTAVSRRGVNPKPESTELSQVNWVQGDATNVKLVEDVLKDAD--AAVHAIGLLFDVDSGLQNLNKIVSGSGSIPDSKSTYDAITRTTAFNVIDTIEKKQARNIFKGDKRFPLCFVSAAEAGWPEVPLGNTVDKLAPSWLNKYLTAKRAVEERLKESNATKGTIRSCIYRPSLIWDWTKFDVLPVIPVFNLASAVGIPFVDKTVRVETLADSIVAGVEGGDVEGVQRFGEMEKLS 278          
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Match: A0A1Q9D6C4_SYMMI (NAD(P)-bd_dom domain-containing protein n=6 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9D6C4_SYMMI)

HSP 1 Score: 165 bits (418), Expect = 3.760e-46
Identity = 100/231 (43.29%), Postives = 141/231 (61.04%), Query Frame = 0
Query:    1 QVTSLSRRGA-PSPENNPVSGVTFLQGDATDPAVLQRVIQDGDYDGVVHAVGMLF-----ASSLNRFVSGSGSIPESGTTYDKITRETAFAATAALDDLARG--GPQRPFVFISAAEAKWNFDGI---FSATPVAWLHDYLVAKRAAEDEAGRLLNNKPSLRGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAVAGLLDGSVSGVQDWRKMEEL 220
            QVTSLSRRG  P P N  +  V +++G+A D + +Q V+  G+ D VVHA+G+LF      ++LN  VSGSGS P+  +TYDKITR+TAF    A+    R    P  P +F+SAAEA W    +         AWL +YLVAKRA E   G L ++  ++R  + RPSL+W+  +   L  +  F + + +G+PF+D+ V V TL++A VA L D  V+GVQ +R+MEEL
Sbjct:  107 QVTSLSRRGENPEPGNAELDQVKWVKGNAADSSTVQNVV--GEADAVVHAIGLLFDVNSGLTNLNLVVSGSGSTPDDTSTYDKITRQTAFNVINAIKGRIRMPFSPPMPMMFVSAAEAGWPDVALGPEVEKVAPAWLKEYLVAKRAVE---GELASSTDTIRSAIFRPSLIWSWTKFDVLPVIPVFNLLNAVGVPFVDKTVTVFTLSKAIVAALEDEGVAGVQRFREMEEL 332          
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Match: A0A7S2QBZ4_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QBZ4_9DINO)

HSP 1 Score: 162 bits (410), Expect = 1.470e-45
Identity = 103/237 (43.46%), Postives = 137/237 (57.81%), Query Frame = 0
Query:    2 VTSLSRRGA-PSPENNPVSGVTFLQGDATDPAVLQRVIQDGDYDGVVHAVGMLF-----ASSLNRFVSGSGSIPESGTTYDKITRETAFAATAALDDLARGGPQRPF------VFISAAEAKWN---FDGIFSATPVAWLHDYLVAKRAAEDEAGRLLNNKPSLRGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAVAGLLDGSVSGVQDWRKMEELSSA 223
            VTSLSRRG  P P N  +  V +  GDATD   ++ ++ D D   VVHA+G+LF      ++LN  VSGSGS+P   +TYD+ITR+TAF       D  RG  + PF      +F+SAAEA W    F     A   AWL  YL AKRA E     +  +  ++R ++ RPSL+W+  +   L  +  F + S LG+PF+D+ V V TL++A VAGL D SVSGVQ +  MEEL  A
Sbjct:   55 VTSLSRRGENPEPGNTELDQVVWRAGDATDAGAVRDLVADAD--AVVHAIGLLFDANSGLTNLNLVVSGSGSVPTEESTYDRITRQTAFNVI----DAVRGRLRMPFSAPTPVMFVSAAEAGWPDVAFGEQVEARAPAWLQQYLAAKRAVE---ANIQASPDTIRPVIFRPSLIWSWTKFDVLPVIPVFNVLSFLGVPFVDKTVTVSTLSKAIVAGLQDPSVSGVQRFMDMEELEQA 282          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9876.17217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTE1_9PHAE1.470e-11877.06NAD(P)-bd_dom domain-containing protein n=2 Tax=Ec... [more]
A0A835YPV7_9STRA1.000e-7055.00NAD(P)-bd_dom domain-containing protein n=1 Tax=Tr... [more]
L1I751_GUITC2.540e-6547.14Epimerase domain-containing protein n=1 Tax=Guilla... [more]
A0A7S0QX38_9CHLO4.730e-5346.72Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
C1N367_MICPC6.170e-5343.57Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
C1E365_MICCC1.710e-4842.74Epimerase domain-containing protein n=1 Tax=Microm... [more]
A0A7S3QJZ9_9STRA7.340e-4743.40Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B8CE04_THAPS1.280e-4641.28NAD(P)-bd_dom domain-containing protein n=1 Tax=Th... [more]
A0A1Q9D6C4_SYMMI3.760e-4643.29NAD(P)-bd_dom domain-containing protein n=6 Tax=Sy... [more]
A0A7S2QBZ4_9DINO1.470e-4543.46Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016040NAD(P)-binding domainPFAMPF13460NAD_binding_10coord: 1..202
e-value: 2.6E-7
score: 30.7
NoneNo IPR availableGENE3D3.40.50.720coord: 1..176
e-value: 3.9E-16
score: 61.0
NoneNo IPR availablePANTHERPTHR12126NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATEDcoord: 2..218
NoneNo IPR availablePANTHERPTHR12126:SF11MIOREX COMPLEX COMPONENT 2coord: 2..218
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9876contigH-elongata_contig9876:3173..5491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9876.17217.1mRNA_H-elongata_contig9876.17217.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9876 3173..5491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9876.17217.1 ID=prot_H-elongata_contig9876.17217.1|Name=mRNA_H-elongata_contig9876.17217.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
QVTSLSRRGAPSPENNPVSGVTFLQGDATDPAVLQRVIQDGDYDGVVHAV
GMLFASSLNRFVSGSGSIPESGTTYDKITRETAFAATAALDDLARGGPQR
PFVFISAAEAKWNFDGIFSATPVAWLHDYLVAKRAAEDEAGRLLNNKPSL
RGIVLRPSLVWTIKRPGALLPVAAFQIGSRLGIPFIDRPVNVETLARAAV
AGLLDGSVSGVQDWRKMEELSSAYISNKGTKASAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR036291NAD(P)-bd_dom_sf