prot_H-elongata_contig98730.17213.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98730.17213.1
Unique Nameprot_H-elongata_contig98730.17213.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length220
Homology
BLAST of mRNA_H-elongata_contig98730.17213.1 vs. uniprot
Match: A0A6H5LA68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA68_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 6.040e-51
Identity = 115/235 (48.94%), Postives = 134/235 (57.02%), Query Frame = 0
Query:    1 MRGGETWKYERAQELLYDGAGIALQGLVNAPDT--AASRGVETRAMT-DEACAATSTARPSGDGGKANPCTPEAEVLDRAYREGSPIEKYLDLPSSDFEEAFVLLPHDANFLHPRLMGANFMNERVQFRLPEEI----GGRAGRG---DWLDDLLNRGREALLRGGAEGEMGMGRDDGGWLRGPGRRRRR------AGGNLDPRAPLAQLFWQTLLPWNVFPTPSRPPXXXPGWL 219
             RGGE WK+ERA+ELLYDGAGIALQGL + P T  AA  G E   +   + C                P   E EV+ RAY EGSPI+KYLDL  SDF+E+F LLP DAN L PRLMG NFMNERV+ R+P  +    GG  G G   + LD++L    + + R  A   M              RR+ R      A GNL P +PLAQLFWQTLLPWNVFPTP RP    P WL
Sbjct:  346 QRGGELWKHERAEELLYDGAGIALQGLPSTPATREAAGAGAEEAGIIYADFC----------------PSAAEVEVVQRAYGEGSPIQKYLDLALSDFDESFALLPQDANILDPRLMGPNFMNERVRLRVPPGVVPGGGGERGWGGGQEVLDEVLAMAMQVIGRQDAAARM--------------RRQGRXXXXXAADGNLSPSSPLAQLFWQTLLPWNVFPTPLRPTPPPPRWL 550          
BLAST of mRNA_H-elongata_contig98730.17213.1 vs. uniprot
Match: D7FK35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK35_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.610e-50
Identity = 116/226 (51.33%), Postives = 133/226 (58.85%), Query Frame = 0
Query:    1 MRGGETWKYERAQELLYDGAGIALQGLVNAPDTAASRGVETRAMTDEACAATSTARPSGDGGKANPCTPEAEVLDRAYREGSPIEKYLDLPSSDFEEAFVLLPHDANFLHPRLMGANFMNERVQFRLPEEI----GGRAGRG---DWLDDLLNRGREALLRGGAEGEMGMGRDDGGWLRGPGRRRRRAGGNLDPRAPLAQLFWQTLLPWNVFPTPSRPPXXXPGWL 219
             RGGE WK+ERA+ELLYDGAGIALQGL + P T  + G           A T        G    P   E EV+ RAY EGSPI+KYLDL  SDF+E+F LLP DAN L PRLMG NFMNERV+ R+P  +    GG  G G   + LD++L    + + R  A   M   R  GG  RG G     A GNL P +PLAQLFWQTLLPWNVFPT  RP    P WL
Sbjct:  548 QRGGELWKHERAEELLYDGAGIALQGLPSTPATREAAGXXXXXXXXXXXAGTI-------GADFCPSAAEVEVVQRAYGEGSPIQKYLDLSLSDFDESFALLPQDANILDPRLMGPNFMNERVRLRVPPGVVPGGGGERGWGGGQEVLDEVLAMAMQVIGRQDAAARM---RRQGG-RRGQGE----AEGNLSPSSPLAQLFWQTLLPWNVFPTHLRPTPPPPRWL 758          
BLAST of mRNA_H-elongata_contig98730.17213.1 vs. uniprot
Match: A0A835ZGE8_9STRA (Transcriptional repressor TCF25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE8_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.470e-16
Identity = 74/219 (33.79%), Postives = 91/219 (41.55%), Query Frame = 0
Query:    2 RGGETWKYERAQELLYDGAGIALQGLVNAPDTAASRGVETR-----AMTDEACAATSTARPSGDGGKANPCTPEAEVLDRAYR-EGSPIEKYLDLPSSDFEEA--FVLLPHDANFLHPRLMGANFMNERVQFRLPEEIGGRAGRGDWLDDLLNRGREALLRGGAEGEMGMGRDDGGWLRGPGRRRRRAGGNLDPRAPLAQLFWQTLLPWNVFPTPSRPP 212
            R GE W+ +  QELLYDGAG+ALQG                     A  D+AC                 C  E EVL RAYR + SP+ KYL L  +DF +A  +  LPHD N L+P L     +    + R         G G  LD  L +     +R  A G                         LDP APLA+L W++LLPWN   TP  PP
Sbjct:  585 RAGELWRRDDTQELLYDGAGLALQGAGGXXXXXXXXXXXXXXXXXDAGADDAC-----------------CEEEREVLARAYRLKDSPLLKYLALSPADFSDAAAYQQLPHDVNILNPALAAPQMLPPGRRLR---------GAGAALDAQLRQ--HGAMRAFAAGXXXXXXXX--------------XXTLDPSAPLAELLWRSLLPWNTMETPRNPP 761          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98730.17213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LA68_9PHAE6.040e-5148.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK35_ECTSI1.610e-5051.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZGE8_9STRA1.470e-1633.79Transcriptional repressor TCF25-domain-containing ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98730contigH-elongata_contig98730:1222..1881 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98730.17213.1mRNA_H-elongata_contig98730.17213.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98730 1222..1899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98730.17213.1 ID=prot_H-elongata_contig98730.17213.1|Name=mRNA_H-elongata_contig98730.17213.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=220bp
MRGGETWKYERAQELLYDGAGIALQGLVNAPDTAASRGVETRAMTDEACA
ATSTARPSGDGGKANPCTPEAEVLDRAYREGSPIEKYLDLPSSDFEEAFV
LLPHDANFLHPRLMGANFMNERVQFRLPEEIGGRAGRGDWLDDLLNRGRE
ALLRGGAEGEMGMGRDDGGWLRGPGRRRRRAGGNLDPRAPLAQLFWQTLL
PWNVFPTPSRPPPPPPGWL*
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