prot_H-elongata_contig98111.17160.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98111.17160.1
Unique Nameprot_H-elongata_contig98111.17160.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig98111.17160.1 vs. uniprot
Match: D7FKF3_ECTSI (HSCB_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF3_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.410e-8
Identity = 27/43 (62.79%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    5 DLFATKSPEEQVISAGNSATVNKAYQTLLRPMSRVAYLVSHVG 47
            DL+A+KS +E+ ISA NSAT NKAYQTL++PM+RV YL+  +G
Sbjct:  169 DLYASKSEDEREISAANSATANKAYQTLVQPMARVKYLMRLLG 211          
BLAST of mRNA_H-elongata_contig98111.17160.1 vs. uniprot
Match: A0A2G8KKW3_STIJA (Putative iron-sulfur cluster co-chaperone protein HscB, mitochondrial-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KKW3_STIJA)

HSP 1 Score: 50.8 bits (120), Expect = 4.490e-6
Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    5 DLFATKSPEEQVISAGNSATVNKAYQTLLRPMSRVAYLVSHVG-PVRQ 51
            D F+ KS  EQ  SAG S+ VNKAY+TLLRP+SR  Y++   G PV +
Sbjct:   83 DRFSQKSEREQSFSAGQSSAVNKAYRTLLRPLSRGLYMLELAGYPVEE 130          
BLAST of mRNA_H-elongata_contig98111.17160.1 vs. uniprot
Match: A0A6M2VHY7_STIJA (DNAJC20 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A6M2VHY7_STIJA)

HSP 1 Score: 50.8 bits (120), Expect = 4.810e-6
Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    5 DLFATKSPEEQVISAGNSATVNKAYQTLLRPMSRVAYLVSHVG-PVRQ 51
            D F+ KS  EQ  SAG S+ VNKAY+TLLRP+SR  Y++   G PV +
Sbjct:  109 DRFSQKSEREQSFSAGQSSAVNKAYRTLLRPLSRGLYMLELAGYPVEE 156          
BLAST of mRNA_H-elongata_contig98111.17160.1 vs. uniprot
Match: UPI000A2A759A (iron-sulfur cluster co-chaperone protein HscB n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A759A)

HSP 1 Score: 47.8 bits (112), Expect = 6.670e-5
Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 RILQDLFATKSPEEQVISAGNSATVNKAYQTLLRPMSRVAYLVSHVG 47
            R+  D F+  +PEEQ +SA +S+ +NKAY TLL+P+SR  YL+   G
Sbjct:  117 RLHPDRFSKCTPEEQNLSALHSSIINKAYNTLLKPLSRGKYLLKQHG 163          
BLAST of mRNA_H-elongata_contig98111.17160.1 vs. uniprot
Match: UPI001C723460 (iron-sulfur cluster co-chaperone protein HscB isoform X1 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C723460)

HSP 1 Score: 47.8 bits (112), Expect = 6.900e-5
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    5 DLFATKSPEEQVISAGNSATVNKAYQTLLRPMSRVAYLV 43
            D FAT+S +E+  SA  SA VNKAYQTLLRP+ R  YL+
Sbjct:  138 DKFATRSDKEKKYSAEQSALVNKAYQTLLRPIDRGLYLL 176          
BLAST of mRNA_H-elongata_contig98111.17160.1 vs. uniprot
Match: A0A3Q2YBC4_HIPCM (HscB mitochondrial iron-sulfur cluster cochaperone n=3 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2YBC4_HIPCM)

HSP 1 Score: 47.8 bits (112), Expect = 6.940e-5
Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    5 DLFATKSPEEQVISAGNSATVNKAYQTLLRPMSRVAYLVSHVG 47
            D F+ KS EEQ  SA  SA VNKAY TLL+P+SR  YL+   G
Sbjct:  146 DNFSQKSAEEQEYSAHQSALVNKAYSTLLKPLSRGLYLLELKG 188          
BLAST of mRNA_H-elongata_contig98111.17160.1 vs. uniprot
Match: A0A852LWR9_9AVES (HSC20 protein (Fragment) n=3 Tax=Cuculiformes TaxID=8940 RepID=A0A852LWR9_9AVES)

HSP 1 Score: 47.0 bits (110), Expect = 7.640e-5
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    5 DLFATKSPEEQVISAGNSATVNKAYQTLLRPMSRVAYL--VSHVGPVRQ 51
            D F  + PEEQ  S  +S+ +NKAYQTLL P+SR  YL  VS V P ++
Sbjct:   40 DRFGQRPPEEQRYSEQHSSLINKAYQTLLHPLSRGLYLLEVSGVEPAKE 88          
BLAST of mRNA_H-elongata_contig98111.17160.1 vs. uniprot
Match: A0A803V486_FICAL (HscB mitochondrial iron-sulfur cluster cochaperone n=1 Tax=Ficedula albicollis TaxID=59894 RepID=A0A803V486_FICAL)

HSP 1 Score: 47.0 bits (110), Expect = 9.770e-5
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    5 DLFATKSPEEQVISAGNSATVNKAYQTLLRPMSRVAYLV--SHVGPVRQ 51
            D F  ++P+EQ  S  +S+ +NKAYQTLL P+SR  YL+  S V PV++
Sbjct:   68 DRFGRRTPKEQYYSEQHSSLINKAYQTLLNPLSRGLYLLELSGVEPVQE 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98111.17160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FKF3_ECTSI1.410e-862.79HSCB_C domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A2G8KKW3_STIJA4.490e-654.17Putative iron-sulfur cluster co-chaperone protein ... [more]
A0A6M2VHY7_STIJA4.810e-654.17DNAJC20 n=1 Tax=Stichopus japonicus TaxID=307972 R... [more]
UPI000A2A759A6.670e-548.94iron-sulfur cluster co-chaperone protein HscB n=1 ... [more]
UPI001C7234606.900e-561.54iron-sulfur cluster co-chaperone protein HscB isof... [more]
A0A3Q2YBC4_HIPCM6.940e-558.14HscB mitochondrial iron-sulfur cluster cochaperone... [more]
A0A852LWR9_9AVES7.640e-551.02HSC20 protein (Fragment) n=3 Tax=Cuculiformes TaxI... [more]
A0A803V486_FICAL9.770e-548.98HscB mitochondrial iron-sulfur cluster cochaperone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110coord: 4..43
e-value: 1.3E-6
score: 30.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98111contigH-elongata_contig98111:2131..2286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98111.17160.1mRNA_H-elongata_contig98111.17160.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98111 2131..2286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98111.17160.1 ID=prot_H-elongata_contig98111.17160.1|Name=mRNA_H-elongata_contig98111.17160.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
RILQDLFATKSPEEQVISAGNSATVNKAYQTLLRPMSRVAYLVSHVGPVR
Q*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036869J_dom_sf