prot_H-elongata_contig97949.17144.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 177 bits (450), Expect = 6.420e-48 Identity = 110/321 (34.27%), Postives = 148/321 (46.11%), Query Frame = 0
Query: 4 GLAVIDFHPLKSDLCVYIYEDETGFVILTLYVDDILFLSASKTLLNKLKNKLMDRFEMTITISQKDYTEDVVQRYGIKSCNPAYTPGIGPELSLNQPEEKLLNEEEKRRYQVITEAAMYLAQ----------------------------------------------------------------------------------------------STMEAELVTAALTMKEAVFCSNMILEIGLDESFGSVPLYIDNKTALHVTDNRTYSPRAKHIALRYFFVQELIDEGKISIHYVKTEDQLADLGTKHLSKHRHRNLI 230
L I F PLKSD CVYIY+ V+LTLYVDD+L + +YT ++ R+G+ SC P T G GPELS+ QPEE LLN E K+RYQ I + MYLAQ ST+EAELV +AL MKE +FC+NM+ E+G F S PL+ID+ L+V N+T+S KH+ALR+F++++++ EG+ISIHY+ TED LAD+GT++L+K RH+ LI
Sbjct: 468 SLVEIGFFPLKSDTCVYIYDHNNTVVVLTLYVDDLLIIRGGAH------------------HQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLI 770
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Match: A0A6H5J6N1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6N1_9PHAE) HSP 1 Score: 163 bits (413), Expect = 4.990e-44 Identity = 103/293 (35.15%), Postives = 146/293 (49.83%), Query Frame = 0
Query: 1 MGVGLAVIDFHPLKSDLCVYIYEDETGFVILTLYVDDILFLSASKTLLNKLKNKLMDRFEM---------------------TITISQKDYTEDVVQRYGIKSCNPAYTPGIGPELSLNQPEEKLLNEEEKRRY--QVITEAAM-----------------------------------------------YL------------------AQSTMEAELVTAALTMKEAVFCSNMILEIGLDESFGSVPLYIDNKTALHVTDNRTYSPRAKHIALRYFFVQELIDEGKISIH 205
+ + L + +PLKSD CVYIY+ VI+TLYVDD++ + + ++ +K KLM++F+M T+TI+Q DYT ++ R+G++ C P P +G ELS QP E +LN+E+ + +V+++AA Y+ STMEAEL+ AALTMKEAVFCSNM+ E+G + FG VPLYI+N LHV N+ YS R KHIAL +F V+EL+ EG I+IH
Sbjct: 208 IDLKLIELGCNPLKSDSCVYIYKRNHTIVIITLYVDDLVVIGGNIEVIEAIKTKLMEQFQMSVLGNVSLVLGMQVTRDGEHGTLTITQADYTRSILARFGMEECKPTSIPSVGSELSTEQPTETVLNKEKTQSQLARVMSKAAKAHMGAAKHLLRGTQDFCITYKRGGFKLTAFSDANWESNPDNARSTSSYMIMMSKAPVSFKTGLQDLTVMSTMEAELLAAALTMKEAVFCSNMMTELGFGQQFGQVPLYINNTATLHVIGNQAYSSRTKHIALLFFCVRELVKEGAITIH 500
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE) HSP 1 Score: 150 bits (379), Expect = 5.250e-38 Identity = 96/247 (38.87%), Postives = 134/247 (54.25%), Query Frame = 0
Query: 10 FHPLKSDLCVYIYEDETGFVILTLYVDDILFLSASKTLLNKLKNKLMDRFEMTITISQK---------DYTEDVVQ---------RYGIKSCNPAYTPGIGPELSLNQPEEKLLNEEEKRRYQVITEAAMYL--------AQSTMEAELVTAALTMKEAVFCSNMILEIGLDESFGSVPLYIDNKTALHVTDNRTYSPRAKHIALRYFFVQELIDEGKISIHYVKTEDQLADLGTKHLSKHRHRNLI 230
F PLKSD CVY+Y+ + V LTLYV ++L S ++ +K KL RF+ T K T+ +V RY I + +G N + + ++ A + L A STMEAEL+ +AL MKEAVFCSNM+ E+G + F VPLY DN LH NR++S R HIALR+F+++EL+ EG+ISIHYV T+ LAD+GTK+L+KH ++L+
Sbjct: 941 FVPLKSDTCVYLYDHDDVQVYLTLYVYELLLASNKSNAISMIKKKLKQRFKSTDIGEAKLVLGMEIKGTATKGIVGCLMYIAQVLRYDIIITYKSEGFKLGTFSDTNWANNPDNGKSTSCYWTMLEHAPVSLKSGIQGPAAISTMEAELIASALAMKEAVFCSNMLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTKYLNKHWLKHLL 1187
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE) HSP 1 Score: 139 bits (350), Expect = 2.340e-37 Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = 0
Query: 124 AQSTMEAELVTAALTMKEAVFCSNMILEIGLDESFGSVPLYIDNKTALHVTDNRTYSPRAKHIALRYFFVQELIDEGKISIHYVKTEDQLADLGTKHLSKHRHRNLI 230
A STMEAELV +AL MKEAVFCSNM+ E+G + F +P+Y DN LH NR++S R KHIALR+FF++EL+ EGKISIHY TED LA +GTKH +KHR ++L+
Sbjct: 98 AMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTKHFNKHRFKHLM 204
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Match: A0A6H5J9N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N2_9PHAE) HSP 1 Score: 142 bits (359), Expect = 3.190e-37 Identity = 79/159 (49.69%), Postives = 98/159 (61.64%), Query Frame = 0
Query: 101 EEKLLNEEEKRRYQVITEAAMYLAQ-----------------------------STMEAELVTAALTMKEAVFCSNMILEIGLDESFGSVPLYIDNKTALHVTDNRTYSPRAKHIALRYFFVQELIDEGKISIHYVKTEDQLADLGTKHLSKHRHRNLI 230
EE LLN+EE RRYQ I MYLAQ STMEAELV AAL MKEAVFCSN++ E+G + F VPLY DN LH NR++S R KHIALR+FF+++L+ EGKI IH+V T+ AD+GTKHL+K R ++L+
Sbjct: 189 EETLLNQEETRRYQGIVGCLMYLAQILRYDIIHRTMLYDALMAFKSGLQSLTAQSTMEAELVAAALAMKEAVFCSNILTELGFGKEFAQVPLYCDNTATLHSLGNRSHSSRTKHIALRFFFIRDLVSEGKIFIHFVPTDSNPADIGTKHLNKDRFQHLL 347
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE) HSP 1 Score: 140 bits (354), Expect = 7.710e-36 Identity = 66/107 (61.68%), Postives = 82/107 (76.64%), Query Frame = 0
Query: 124 AQSTMEAELVTAALTMKEAVFCSNMILEIGLDESFGSVPLYIDNKTALHVTDNRTYSPRAKHIALRYFFVQELIDEGKISIHYVKTEDQLADLGTKHLSKHRHRNLI 230
A STMEAELV +AL MKEAVFCSNM+ E+G + F +P+Y DN LH NR++S R KHIALR+FF++EL+ EGKISIHY TED LAD+GTKH +KHR +L+
Sbjct: 323 AMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLM 429
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 142 bits (359), Expect = 1.360e-35 Identity = 67/107 (62.62%), Postives = 84/107 (78.50%), Query Frame = 0
Query: 124 AQSTMEAELVTAALTMKEAVFCSNMILEIGLDESFGSVPLYIDNKTALHVTDNRTYSPRAKHIALRYFFVQELIDEGKISIHYVKTEDQLADLGTKHLSKHRHRNLI 230
A STMEAELV +AL MKEAVFCSNM+ E+G + F +P+Y DN LH NR++S R KHIALR+FF++EL+ EGKISIHYV TED LAD+GTKH +KHR ++L+
Sbjct: 544 AMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLM 650
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE) HSP 1 Score: 142 bits (359), Expect = 2.410e-35 Identity = 66/107 (61.68%), Postives = 84/107 (78.50%), Query Frame = 0
Query: 124 AQSTMEAELVTAALTMKEAVFCSNMILEIGLDESFGSVPLYIDNKTALHVTDNRTYSPRAKHIALRYFFVQELIDEGKISIHYVKTEDQLADLGTKHLSKHRHRNLI 230
A STMEAELV +AL MKEAVFCSNM+ E+G + F +P+Y DN LH NR++S R KHIALR+FF++EL+ EGKISIHYV+TED LAD+GTKH + HR ++L+
Sbjct: 883 AMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLM 989
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE) HSP 1 Score: 140 bits (354), Expect = 1.160e-34 Identity = 64/107 (59.81%), Postives = 85/107 (79.44%), Query Frame = 0
Query: 124 AQSTMEAELVTAALTMKEAVFCSNMILEIGLDESFGSVPLYIDNKTALHVTDNRTYSPRAKHIALRYFFVQELIDEGKISIHYVKTEDQLADLGTKHLSKHRHRNLI 230
A STMEAEL+ +AL MKEAVFCSN++ E+GL + F VPLY DN LH NR++S R KHIALR+F+++ELI EG+ISIHY+ T+ +AD+GTKHL+KHR ++L+
Sbjct: 1053 AMSTMEAELIASALAMKEAVFCSNILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTKHLNKHRLKHLL 1159
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 137 bits (345), Expect = 1.940e-33 Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = 0
Query: 124 AQSTMEAELVTAALTMKEAVFCSNMILEIGLDESFGSVPLYIDNKTALHVTDNRTYSPRAKHIALRYFFVQELIDEGKISIHYVKTEDQLADLGTKHLSKHRHRNLI 230
A STMEAELV +AL M EAVF SNM+ E+G + F +P+Y DN LH NR++S R KHIALR+FF++EL+ EGKISIHYV TED LAD+GTKH +KHR ++L+
Sbjct: 1552 AMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLM 1658 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97949.17144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig97949.17144.1 ID=prot_H-elongata_contig97949.17144.1|Name=mRNA_H-elongata_contig97949.17144.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bpback to top |