mRNA_H-elongata_contig122430.1714.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig122430.1714.1
Unique NamemRNA_H-elongata_contig122430.1714.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5KAA3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA3_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 2.470e-45
Identity = 122/343 (35.57%), Postives = 177/343 (51.60%), Query Frame = 1
Query:    1 DVIGLQETRHSGHSAFTQAGYLVYCSSECGGKNGEKKGQGGAGLAIRTYITRAA----RLSEFIGDRLLKITLELRGRAKAVTFFVAYAPTEKQ------NASNKHAFWTSLDRAVEEVSRHEKLFVLMDANARTGRREK--------GQVRRPGRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAAVVR----FFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 963
            DVIGLQETR +G  +    GY++  S    G   +K+G  G G+AI+  +  +     R  E I  RL+K+ L++ GR   VTF V YAP+E        + + K +FWT+LD A+ EV   + L VLMDANARTGRR          G   R  RGW   +  + E+                 ++ +     ++      +K RS A  R    FFE +V  LEK+ R GDQ GF++++K + ++  +   +Q I+ E G +L D   IR+RW R+F  LLN KS  +D     ++ + P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:   13 DVIGLQETRRAGQGSIAHDGYVIIWSGARAGTK-DKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPSETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDWCCDAKIMGACARGQRGWY-TSEAQQEISXXXXXXXXXXXXXXGASKNSAFEATLKAMLKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVKGKRSFTSQNIKYEDGKVLWDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVRGMANRKAVGPDDLPAELIKLFL 352          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5J5Z5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Z5_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 4.480e-32
Identity = 111/324 (34.26%), Postives = 158/324 (48.77%), Query Frame = 1
Query:  163 RLSEFIGDRLLKITLELRGRAKAVTFFVAYAPTEKQ------NASNKHAFWTSLDRAVEEVSRHEKLFVLMDANARTGRREKGQVRRPGRG-WCRDART---EAELQAATD----------------VMHAAWQGLK--------------------------MDTRGAQ----LRKAVRKACNGLKKV-RSAAVVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 963
            R  E I  RL+K+ L++ GR   VTF V YAPT+        + + K +FWT++D A+ EV   + L VLMDANARTGRR  G       G + RD+     E  L  A+D                V H      K                          +D + +     L  A+ KA    + + R  A+ +FFE +V  LEK+ R GDQ GF++++K + +E  +   +Q I+DE G +LRD   IR+RW R+F  LLN KS  +D     ++ + P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:   10 RTVECISLRLMKVRLQI-GRTCGVTFVVGYAPTDTVRTTAGGDVNAKDSFWTAVDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDSMNNNGERLLGPASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKKYHLDFILMRQTNRRFVRNVSVKLVDFKDSDHNLVLTTAMLKAARKKRSIARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFL 332          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5KRJ3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ3_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 4.710e-25
Identity = 104/330 (31.52%), Postives = 151/330 (45.76%), Query Frame = 1
Query:    1 DVIGLQETRHSGHSAFTQAGYLVYCSSECGGKNGEKKGQGGAGLAIRTY----ITRAARLSEFIGDRLLKITLELRGRAKAVTFFVAYAPTEKQNASNKHAFWTSLDRAVEEVSRHEKLFVLMDANARTGRREKGQVRRPGRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAAVVR----FFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQ-HPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 963
            DVIGLQETR +G  A T  GY++  S    G   +K+G  G G+AI+      +    R  E I  RL+K      GR +        +P  +                                 A   R  +GQ     RGW   +  + E+  A+  + AA Q L+  ++       ++      +K RS A  R    FFE +V  LEK+ R GDQ GF +++K + +E  +   +Q I+DE G + RD   IR+RW R+F  L N KS  +D     ++ + H  V   GI P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:  127 DVIGLQETRRAGQGAITHDGYVIIWSGARAGTK-DKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKAA---NGRDRRRADATVMSPASE--------------------------------TAPLARCARGQ-----RGWY-TSEAQHEISEASTEIKAAHQQLRGASKNNAFEATLKAMLKAARKNRSIARWRALETFFEGYVRQLEKKSREGDQAGFNRHLKMIDVEGKRSFTSQNIKDEDGKVFRDPTFIRQRWARWFHKLPNTKSPTIDLHATDKVKRCHTCVPLEGI-PSLLEVEEAVREMANRKAVGPDDLPAELIKLFL 413          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5JGC2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC2_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 9.240e-24
Identity = 81/236 (34.32%), Postives = 123/236 (52.12%), Query Frame = 1
Query:  268 QNASNKHAFWTSLDRAVEEVSRHEKLFVLMDANARTGRREKGQVRRPGRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAAVVR----FFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 963
            QN ++     T+L R   E +  E    +M A A T      +  R  RGW   +  + E+  A+  + AA Q L+  ++ +     ++      +K RS A  R    FFE +V  LEK+ R GDQ GF++++K + +E  +   +Q I+DE G +LRD   IR+RW R+F  LLN KS  +D     ++ + P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:   87 QNRASSRPPPTALRRPTGETAA-ELTATVMSAAAETA--PLARCARGQRGWY-TSEAQHEISEASKEIKAAQQQLRGVSKNSAFEATLKAMLKAARKKRSIARWRALETFFEGYVRQLEKKRRAGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDNLPAELIKLFL 318          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5K8Z5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z5_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.080e-23
Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 1
Query:  409 GRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAA----VVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 963
            G+G    +  + E+  A+  +  A Q L+  ++ + L   ++      +K RS+A    + +FFE +V  LEK+ R GDQ GF++++K + +E  + + +Q I+DE G +LRD    R+RW R+F  LLN KS  +D     R+ Q P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:  191 GKGGWYTSEAQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL 379          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.210e-23
Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 1
Query:  409 GRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAA----VVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 963
            G+G    +  + E+  A+  +  A Q L+  ++ + L   ++      +K RS+A    + +FFE +V  LEK+ R GDQ GF++++K + +E  + + +Q I+DE G +LRD    R+RW R+F  LLN KS  +D     R+ Q P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:  329 GKGGWYTSEAQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL 517          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.290e-23
Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 1
Query:  409 GRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAA----VVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 963
            G+G    +  + E+  A+  +  A Q L+  ++ + L   ++      +K RS+A    + +FFE +V  LEK+ R GDQ GF++++K + +E  + + +Q I+DE G +LRD    R+RW R+F  LLN KS  +D     R+ Q P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:  441 GKGGWYTSEAQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL 629          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.360e-23
Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 1
Query:  409 GRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAA----VVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 963
            G+G    +  + E+  A+  +  A Q L+  ++ + L   ++      +K RS+A    + +FFE +V  LEK+ R GDQ GF++++K + +E  + + +Q I+DE G +LRD    R+RW R+F  LLN KS  +D     R+ Q P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:  562 GKGGWYTSEAQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL 750          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5KTM0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTM0_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.820e-22
Identity = 92/282 (32.62%), Postives = 136/282 (48.23%), Query Frame = 1
Query:    1 DVIGLQETRHSGHSAFTQAGYLVYCSSECGGKNGEKKGQGGAGLAIR----TYITRAARLSEFIGDRLLKITLELRGRAKAVTFFVAYAPTEK------QNASNKHAFWTSLDRAVEEVSRHEKLFVLMDANARTGRREKGQVRRPGRGWCRDARTEAELQAATDVMHAAWQ---GLKMDTRGAQLRKAVRKACNGLKKVRSAAVVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLD 807
            DVIGLQ TR  G  +    GY++  S          +G  G G+A++      +    R  E I  RL+K+ L++ GR   VT  V YAPTE        + + K +FWT+LD A+ EV   + L VLMDANARTGRR  G         C DA+         D+M+   +   GL  D + +      R    G++    ++  +  E++ +D    +R  D+  F  ++K + +E  +   +Q I DE G +LRD    R+RW R+F  LLN KS  +D
Sbjct:   27 DVIGLQGTRREGQGSIAHDGYVIIWSGA--------QGVHGVGIAMKGAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTLVVGYAPTETIRTIAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG---------CCDAKIMGAY--GRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSN-KGKEKYRLDFIL-MRQTDRR-FRAHLKMIDVEGKRSFTSQNINDEDGEVLRDPTFTRQRWARWFHKLLNTKSPTID 285          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5L012_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L012_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 2.760e-22
Identity = 65/167 (38.92%), Postives = 95/167 (56.89%), Query Frame = 1
Query:  475 AAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAAVVR----FFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 963
            AA Q L+  ++ +     +R      +K RS A  R    FFE +V  LEK+ R GDQ GF++++K + +E  +   +Q I+DE G +LRD   IR+RW R+F  LLN KS  +D     ++ + P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:    2 AAQQQLRGASKNSAFEAILRAMLKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLREVEEAVREMANRKAVGPDDLPAELIKLFL 168          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAA3_9PHAE2.470e-4535.57Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J5Z5_9PHAE4.480e-3234.26Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KRJ3_9PHAE4.710e-2531.52Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JGC2_9PHAE9.240e-2434.32Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K8Z5_9PHAE3.080e-2335.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KC90_9PHAE3.210e-2335.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE3.290e-2335.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDI8_9PHAE3.360e-2335.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KTM0_9PHAE1.820e-2232.62Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L012_9PHAE2.760e-2238.92Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122430contigH-elongata_contig122430:8..1504 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score71.2
Seed ortholog evalue9.7e-10
Seed eggNOG ortholog6500.XP_005096957.1
EggNOG free text desc.protein kinase activity
EggNOG OGs39TZY@33154,3BI15@33208,KOG1075@1,KOG1075@2759
COG Functional cat.J
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size966
Cds size966
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929720.5753262-CDS-H-elongata_contig122430:7..5751622929720.5753262-CDS-H-elongata_contig122430:7..575Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122430 8..575 -
1691679132.046171-CDS-H-elongata_contig122430:7..5751691679132.046171-CDS-H-elongata_contig122430:7..575Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122430 8..575 -
1622929720.5887296-CDS-H-elongata_contig122430:1106..15041622929720.5887296-CDS-H-elongata_contig122430:1106..1504Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122430 1107..1504 -
1691679132.0609736-CDS-H-elongata_contig122430:1106..15041691679132.0609736-CDS-H-elongata_contig122430:1106..1504Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig122430 1107..1504 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122430.1714.1prot_H-elongata_contig122430.1714.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig122430 8..1504 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig122430.1714.1

>prot_H-elongata_contig122430.1714.1 ID=prot_H-elongata_contig122430.1714.1|Name=mRNA_H-elongata_contig122430.1714.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=322bp
DVIGLQETRHSGHSAFTQAGYLVYCSSECGGKNGEKKGQGGAGLAIRTYI
TRAARLSEFIGDRLLKITLELRGRAKAVTFFVAYAPTEKQNASNKHAFWT
SLDRAVEEVSRHEKLFVLMDANARTGRREKGQVRRPGRGWCRDARTEAEL
QAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAAVVRFFERHV
VDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIR
ERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKA
MSNAKAVGPDGLPVELLKLGL*
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mRNA from alignment at H-elongata_contig122430:8..1504-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig122430.1714.1 ID=mRNA_H-elongata_contig122430.1714.1|Name=mRNA_H-elongata_contig122430.1714.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1497bp|location=Sequence derived from alignment at H-elongata_contig122430:8..1504- (Himanthalia elongata Himel1 dioecious)
GACGTTATCGGTCTCCAGGAGACCCGCCACAGTGGACATTCAGCCTTCAC TCAGGCTGGCTACTTGGTGTACTGCAGCAGTGAGTGCGGTGGTAAAAATG GTGAGAAGAAAGGGCAAGGTGGAGCAGGGCTAGCTATTAGAACCTACATC ACACGTGCTGCACGCCTATCGGAGTTTATCGGTGATCGCTTGCTAAAGAT TACACTTGAACTACGGGGTCGAGCCAAGGCCGTTACGTTTTTTGTGGCGT ATGCCCCCACTGAAAAACAAAATGCTAGTAATAAACATGCATTCTGGACG AGCTTGGATAGAGCTGTGGAGGAGGTATCTAGACACGAAAAGCTGTTCGT GTTGATGGATGCCAACGCCCGCACGGGGAGGAGGGAGAAGGGACAGGTGT GGAGCAAGGATATAAAAATTCTCGGTGCCTACGGCCGAGATACCCTCAAC GATAACGGAGAGCTACTGCTGTCCTTCGCTAACAGCCATGACCTAGCTCT TGTGAACACGTTCTGTAGCACATCCAAGGGCGGCGTACCACATACTTTCA ACGGGCTAGGAAACAAACGTATCGGGAAAAAACGTATCGACTACATCTTA ACGAGACAACGTGATCGCAAACTCGTACGGAACGTTACGGTGCACCGTCA GCCCTCCTTCCTTCCAATTTCGAACCACAATATTGTATCCGCACCCGTCA AGCTCTTCGGCCATTTTGCTCGTAATCGCCGGTTGAGGGCTCCAACTAAG CCACCAGTGGACCGTAGGCGCCTGGTAACTGACCCCCAACTTCGACACGA GGTGGCCACGGCGGTTGGAAGGCACCTTAGGGCAAACCCTCCTAGAAACA GCAGTGTGGACGACTTGGAAGCCGCATTCACCGCAGCCATCATGCGGACC GCTGAATTCGTGATCCCACCCCAGGAAAGAAGGAGACCGGGGCGAGGTTG GTGTAGAGACGCACGAACGGAAGCTGAACTGCAGGCTGCAACTGATGTGA TGCACGCAGCGTGGCAGGGCCTGAAAATGGACACAAGGGGTGCGCAGCTG CGGAAGGCCGTCAGGAAAGCATGTAACGGGCTGAAGAAAGTGCGAAGTGC AGCAGTCGTTCGTTTCTTCGAGCGCCACGTCGTTGATTTGGAGAAGCAGC TGCGCGTGGGAGACCAGCACGGATTCTTCCAAAACATCAAATCGGTGCAA CTGGAGGAGACGAAGAAGGTCAAAGCACAGTGCATCCGCGACGAGGGAGG AATACTGCTACGCGACGAAGGGCGAATCCGCGAGAGGTGGGTGCGATTCT TCCGCGCGCTGTTGAACTTGAAATCCGACATGCTCGATCCCGACATCCAG AAAAGGCTGCCACAGCATCCAGTTGTGAGCTCCCTCGGGATCGAGCCCAC GGAAGAGGAGATTGCTACAGCGATGAAGGCAATGTCAAACGCGAAAGCAG TGGGGCCGGATGGCCTTCCCGTGGAACTGTTGAAACTCGGACTTTAA
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Coding sequence (CDS) from alignment at H-elongata_contig122430:8..1504-

>mRNA_H-elongata_contig122430.1714.1 ID=mRNA_H-elongata_contig122430.1714.1|Name=mRNA_H-elongata_contig122430.1714.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1932bp|location=Sequence derived from alignment at H-elongata_contig122430:8..1504- (Himanthalia elongata Himel1 dioecious)
GACGTTATCGGTCTCCAGGAGACCCGCCACAGTGGACATTCAGCCTTCAC
TCAGGCTGGCTACTTGGTGTACTGCAGCAGTGAGTGCGGTGGTAAAAATG
GTGAGAAGAAAGGGCAAGGTGGAGCAGGGCTAGCTATTAGAACCTACATC
ACACGTGCTGCACGCCTATCGGAGTTTATCGGTGATCGCTTGCTAAAGAT
TACACTTGAACTACGGGGTCGAGCCAAGGCCGTTACGTTTTTTGTGGCGT
ATGCCCCCACTGAAAAACAAAATGCTAGTAATAAACATGCATTCTGGACG
AGCTTGGATAGAGCTGTGGAGGAGGTATCTAGACACGAAAAGCTGTTCGT
GTTGATGGATGCCAACGCCCGCACGGGGAGGAGGGAGAAGGGACAGGTGA
CGTTATCGGTCTCCAGGAGACCCGCCACAGTGGACATTCAGCCTTCACTC
AGGCTGGCTACTTGGTGTACTGCAGCAGTGAGTGCGGTGGTAAAAATGGT
GAGAAGAAAGGGCAAGGTGGAGCAGGGCTAGCTATTAGAACCTACATCAC
ACGTGCTGCACGCCTATCGGAGTTTATCGGTGATCGCTTGCTAAAGATTA
CACTTGAACTACGGGGTCGAGCCAAGGCCGTTACGTTTTTTGTGGCGTAT
GCCCCCACTGAAAAACAAAATGCTAGTAATAAACATGCATTCTGGACGAG
CTTGGATAGAGCTGTGGAGGAGGTATCTAGACACGAAAAGCTGTTCGTGT
TGATGGATGCCAACGCCCGCACGGGGAGGAGGGAGAAGGGACAGGTAAGG
AGACCGGGGCGAGGTTGGTGTAGAGACGCACGAACGGAAGCTGAACTGCA
GGCTGCAACTGATGTGATGCACGCAGCGTGGCAGGGCCTGAAAATGGACA
CAAGGGGTGCGCAGCTGCGGAAGGCCGTCAGGAAAGCATGTAACGGGCTG
AAGAAAGTGCGAAGTGCAGCAGTCGTTCGTTTCTTCGAGCGCCACGTCGT
TGATTTGGAGAAGCAGCTGCGCGTGGGAGACCAGCACGGATTCTTCCAAA
ACATCAAATCGGTGCAACTGGAGGAGACGAAGAAGGTCAAAGCACAGTGC
ATCCGCGACGAGGGAGGAATACTGCTACGCGACGAAGGGCGAATCCGCGA
GAGGTGGGTGCGATTCTTCCGCGCGCTGTTGAACTTGAAATCCGACATGC
TCGATCCCGACATCCAGAAAAGGCTGCCACAGCATCCAGTTGTGAGCTCC
CTCGGGATCGAGCCCACGGAAGAGGAGATTGCTACAGCGATGAAGGCAAT
GTCAAACGCGAAAGCAGTGGGGCCGGATGGCCTTCCCGTGGAACTGTTGA
AACTCGGACTTTAAAAGGAGACCGGGGCGAGGTTGGTGTAGAGACGCACG
AACGGAAGCTGAACTGCAGGCTGCAACTGATGTGATGCACGCAGCGTGGC
AGGGCCTGAAAATGGACACAAGGGGTGCGCAGCTGCGGAAGGCCGTCAGG
AAAGCATGTAACGGGCTGAAGAAAGTGCGAAGTGCAGCAGTCGTTCGTTT
CTTCGAGCGCCACGTCGTTGATTTGGAGAAGCAGCTGCGCGTGGGAGACC
AGCACGGATTCTTCCAAAACATCAAATCGGTGCAACTGGAGGAGACGAAG
AAGGTCAAAGCACAGTGCATCCGCGACGAGGGAGGAATACTGCTACGCGA
CGAAGGGCGAATCCGCGAGAGGTGGGTGCGATTCTTCCGCGCGCTGTTGA
ACTTGAAATCCGACATGCTCGATCCCGACATCCAGAAAAGGCTGCCACAG
CATCCAGTTGTGAGCTCCCTCGGGATCGAGCCCACGGAAGAGGAGATTGC
TACAGCGATGAAGGCAATGTCAAACGCGAAAGCAGTGGGGCCGGATGGCC
TTCCCGTGGAACTGTTGAAACTCGGACTTTAA
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