prot_H-elongata_contig97619.17113.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97619.17113.1
Unique Nameprot_H-elongata_contig97619.17113.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length206
Homology
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BLAST of mRNA_H-elongata_contig97619.17113.1 vs. uniprot
Match: A0A6H5L7Y5_9PHAE (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y5_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 8.710e-11
Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 0 
Query:    1 MPWLELLHVWIHDVASRDERLRRAVPLAPLFSASRAGR 38
            +PWL+LLH+W+HDVASRD RLR+AVPLAPLFSAS  GR
Sbjct:  327 VPWLQLLHLWVHDVASRDARLRKAVPLAPLFSASSEGR 364
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BLAST of mRNA_H-elongata_contig97619.17113.1 vs. uniprot
Match: D7G4T0_ECTSI (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4T0_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 5.530e-10
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0 
Query:    1 MPWLELLHVWIHDVASRDERLRRAVPLAPLFSASRAGR 38
            +PWL+LLH+W+HDVASRD RLR+AVPLAPLF AS  GR
Sbjct:  373 IPWLQLLHLWVHDVASRDARLRKAVPLAPLFFASSEGR 410
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97619.17113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7Y5_9PHAE8.710e-1178.95Bifunctional lysine-specific demethylase and histi... [more]
D7G4T0_ECTSI5.530e-1076.32Bifunctional lysine-specific demethylase and histi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97619contigH-elongata_contig97619:165..1956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97619.17113.1mRNA_H-elongata_contig97619.17113.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97619 91..2450 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97619.17113.1 ID=prot_H-elongata_contig97619.17113.1|Name=mRNA_H-elongata_contig97619.17113.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
MPWLELLHVWIHDVASRDERLRRAVPLAPLFSASRAGRSGSEEAVHPPIV
SREFQEALEACVPRGGGADASSALKRLDSLLRSGGDLQRVRDMYELKSED
GEWWFDEQSEATNGSDTDDEKEECSARSSLARARRQGEWSREMLTAFDRG
SFSSSMRERFKGFQEVASVERALRRMVSVATARARERVATTERDLARCGQ
SRRVN*
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