prot_H-elongata_contig96673.17049.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96673.17049.1
Unique Nameprot_H-elongata_contig96673.17049.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
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BLAST of mRNA_H-elongata_contig96673.17049.1 vs. uniprot
Match: D8LQ04_ECTSI (USP7_ICP0_bdg domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ04_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 3.420e-8
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:    1 IAAGSSDGSIILWDIVTGKTLALLKGHTNDVECIDFSAVS 40
            IAAGSSD +I +WD+ TG  LAL KGH +DVE IDFSA++
Sbjct:  676 IAAGSSDKAIRVWDLATGVALALFKGHKDDVESIDFSAIA 715
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BLAST of mRNA_H-elongata_contig96673.17049.1 vs. uniprot
Match: A0A369GLQ1_9HYPO (ANAPC4_WD40 domain-containing protein n=2 Tax=Ophiocordyceps TaxID=474995 RepID=A0A369GLQ1_9HYPO)

HSP 1 Score: 50.8 bits (120), Expect = 9.300e-6
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:    1 IAAGSSDGSIILWDIVTGKTLALLKGHTNDVECIDFSAVSPTDRP 45
            IAAGS+DG++++W   TGK L  L GH   V C+DFS   PT+ P
Sbjct:  294 IAAGSADGTVLVWSTDTGKLLYKLPGHKGAVNCVDFS---PTEEP 335
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BLAST of mRNA_H-elongata_contig96673.17049.1 vs. uniprot
Match: A0A496A410_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A496A410_9BACT)

HSP 1 Score: 48.9 bits (115), Expect = 4.480e-5
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0 
Query:    2 AAGSSDGSIILWDIVTGKTLALLKGHTNDVECIDFSAVSPT 42
            ++GSSDG+I LWD+ TGK L  LKGHT  V  + FS  S T
Sbjct:  215 SSGSSDGTIQLWDVETGKQLRTLKGHTEMVNTLAFSPDSTT 255
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BLAST of mRNA_H-elongata_contig96673.17049.1 vs. uniprot
Match: A0A7R9XY20_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9XY20_9VIRI)

HSP 1 Score: 47.0 bits (110), Expect = 5.870e-5
Identity = 17/37 (45.95%), Postives = 27/37 (72.97%), Query Frame = 0 
Query:    1 IAAGSSDGSIILWDIVTGKTLALLKGHTNDVECIDFS 37
            +A GSSDGS++LWD+   + L L++ H + V C+DF+
Sbjct:    6 LATGSSDGSVVLWDVTRRERLLLIEAHADVVRCLDFA 42
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BLAST of mRNA_H-elongata_contig96673.17049.1 vs. uniprot
Match: A0A2W4WEI6_9CYAN (NB-ARC domain-containing protein n=2 Tax=Pseudanabaena TaxID=1152 RepID=A0A2W4WEI6_9CYAN)

HSP 1 Score: 48.5 bits (114), Expect = 6.340e-5
Identity = 17/37 (45.95%), Postives = 28/37 (75.68%), Query Frame = 0 
Query:    1 IAAGSSDGSIILWDIVTGKTLALLKGHTNDVECIDFS 37
            +A+GS D ++ LWD++TGK L  L+GHT  ++C+ F+
Sbjct:  964 LASGSEDQTVRLWDVLTGKCLQTLRGHTGPIQCVTFN 1000
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96673.17049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LQ04_ECTSI3.420e-865.00USP7_ICP0_bdg domain-containing protein n=1 Tax=Ec... [more]
A0A369GLQ1_9HYPO9.300e-651.11ANAPC4_WD40 domain-containing protein n=2 Tax=Ophi... [more]
A0A496A410_9BACT4.480e-556.10Uncharacterized protein n=1 Tax=Candidatus Poribac... [more]
A0A7R9XY20_9VIRI5.870e-545.95Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A2W4WEI6_9CYAN6.340e-545.95NB-ARC domain-containing protein n=2 Tax=Pseudanab... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..44
e-value: 7.0E-11
score: 43.3
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 1..15
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..37
score: 12.104
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..23
score: 11.177
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96673contigH-elongata_contig96673:2151..2339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96673.17049.1mRNA_H-elongata_contig96673.17049.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96673 2151..2339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96673.17049.1 ID=prot_H-elongata_contig96673.17049.1|Name=mRNA_H-elongata_contig96673.17049.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
IAAGSSDGSIILWDIVTGKTLALLKGHTNDVECIDFSAVSPTDRPTDWSG
WRNCRMCRSIAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
IPR036322WD40_repeat_dom_sf