prot_H-elongata_contig96564.17039.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96564.17039.1
Unique Nameprot_H-elongata_contig96564.17039.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length158
Homology
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Match: D7FKS5_ECTSI (WD repeat, SAM and U-box domain containing 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS5_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 2.150e-67
Identity = 118/158 (74.68%), Postives = 132/158 (83.54%), Query Frame = 0
Query:    1 QGSRFFVGRSGATLGRRQTNTIAFSHESNGSVMGIDASISGEHARVEYNEDGDYLYIMDGTPSKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTVRFSVALETMVVEKEITASNRDHFMSLAA-KERRSSPSLTMGAPRREGRGGGIFRVTSNSGR 157
            QGSRFFVGR GATLGRRQTNTIAFSHES G+VMGIDASISGEHAR+ Y+E+GD+L+IMDGTP+KPSTNGTW RLSGMH ES PY LSNGAEILIGTVRFSV LE+MVVEKE+T  NR+HFMSLA  ++RRSSP    GA R+ G  GG     + SGR
Sbjct:  446 QGSRFFVGREGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEEGDFLHIMDGTPTKPSTNGTWFRLSGMHTESRPYPLSNGAEILIGTVRFSVTLESMVVEKELTVDNRNHFMSLAKDQDRRSSP--PWGAGRQSGSRGGRVDQANRSGR 601          
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Match: A0A6H5KH40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH40_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.840e-48
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 0
Query:    2 GSRFFVGRSGATLGRRQTNTIAFSHESNGSVMGIDASISGEHARVEYNEDGDYLYIMDGTPSKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTVR 98
            GSRFFVGR GATLGRRQTNTIAFSHES G+VMGIDASISGEHAR+ Y+E+GD+L+IMDGTP+KPSTNGTW RLSGMH ES PY LSNGAEILIGTVR
Sbjct:  382 GSRFFVGREGATLGRRQTNTIAFSHESGGTVMGIDASISGEHARIVYDEEGDFLHIMDGTPTKPSTNGTWFRLSGMHTESRPYPLSNGAEILIGTVR 478          
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Match: A0A835Z8M7_9STRA (WD repeat, SAM and U-box domain-containing 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8M7_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.010e-40
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 0
Query:    1 QGSRFFVGRSGATLGRRQTNTIAFSHESNGSVMGIDASISGEHARVEYNEDGDYLYIMDGTPSKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTVRFSVALETMVVEKEI 112
            QG ++ VGR GATLGR+Q+N+IAFSH +NG +MGID+SISGEHARVEY+   D L ++DGTP+KPSTNGTW RLS MH  S P+ L +G E+L+GTVRFS A E MVVE E+
Sbjct:  364 QGRQYAVGRDGATLGRKQSNSIAFSHMANGQLMGIDSSISGEHARVEYSAARDCLLVLDGTPAKPSTNGTWFRLSQMHARSAPHALRDGMELLVGTVRFSAAHEMMVVEVEL 475          
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Match: D7FNJ7_ECTSI (Armadillo/beta-catenin repeat family protein / U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ7_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 2.920e-34
Identity = 69/103 (66.99%), Postives = 79/103 (76.70%), Query Frame = 0
Query:    1 QGSRFFVGRSGATLGRRQTNTIAFSHESNGSVMGIDASISGEHARVEYNEDGDYLYIMDGTPSKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTVRFSVAL 103
            QG RFFVGR GATLG R+TNTIAFS+ES G+VMGID  ISG HAR+ Y++ G + +I DG   K S NGTW+RLSG H ES PY LS+G EILIGTV FSV L
Sbjct: 1401 QGKRFFVGREGATLGGRKTNTIAFSYESGGTVMGIDDFISGVHARIVYDDGGGFFHITDGNSFKSSKNGTWVRLSGKHTESRPYPLSHGTEILIGTVPFSVTL 1503          
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Match: A0A7S2NWM2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWM2_9STRA)

HSP 1 Score: 128 bits (322), Expect = 9.930e-32
Identity = 62/113 (54.87%), Postives = 85/113 (75.22%), Query Frame = 0
Query:    1 QGSRFFVGRSGATLGRRQTNTIAFSHESNGSVMGIDASISGEHARVEYNEDGDYLYIMDGTP-SKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTVRFSVALETMVVEKEI 112
            Q   + + + GATLGR+Q+NTI+FSHE NG+ +GID+S+SGEHA ++YNE+     + DG    K STNGTW+RLSGMHKESG Y ++N  E+L GTVRF V+++  VVE+E+
Sbjct:  461 QNKEYPISKMGATLGRKQSNTISFSHEVNGNQVGIDSSVSGEHANLKYNENTKLFELSDGVGIGKCSTNGTWVRLSGMHKESGFYAIANQTELLFGTVRFQVSIDEQVVEREL 573          
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Match: A0A7S1U8M6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8M6_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.010e-29
Identity = 60/113 (53.10%), Postives = 83/113 (73.45%), Query Frame = 0
Query:    1 QGSRFFVGRSGATLGRRQTNTIAFSHESNGSV-MGIDASISGEHARVEYNEDGDYLYIMDGTPSKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTVRFSVALETMVVEKEI 112
            QG  F V R   TLGR+Q N ++FS   +  V +GID+S+SG H+RVEY+E+ D L ++DG+ SKPSTNGTW+RLS MH+ES  + L  G E+LIGTVRF  +++ ++VEK+I
Sbjct:   47 QGRTFEVPRKSVTLGRKQVNDVSFSQMGDDGVCLGIDSSVSGIHSRVEYDEERDALMLLDGSGSKPSTNGTWVRLSKMHEESKCFPLRAGVEVLIGTVRFVTSIDEVIVEKDI 159          
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Match: A0A7R9UA93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA93_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.600e-26
Identity = 58/113 (51.33%), Postives = 80/113 (70.80%), Query Frame = 0
Query:    1 QGSRFFVGRSGATLGRRQTNTIAFSH-ESNGSVMGIDASISGEHARVEYNEDGDYLYIMDGTPSKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTVRFSVALETMVVEKEI 112
            QG  F V R   +LGR+Q N ++FS    +G  +GID+S+SG H+R+EY+E+ D L +MDG+ SKPSTNGTW+RLS MH  S  + L  G E+LIGTVRF  +++ ++VEK I
Sbjct:  336 QGKTFEVERRSVSLGRKQINDVSFSQLGDDGVCLGIDSSVSGIHSRIEYDEEEDALQLMDGSASKPSTNGTWVRLSKMHTRSKFFPLRPGVELLIGTVRFITSVDEVIVEKAI 448          
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Match: A0A482RQD8_9ARCH (FHA domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RQD8_9ARCH)

HSP 1 Score: 107 bits (266), Expect = 3.080e-26
Identity = 55/118 (46.61%), Postives = 72/118 (61.02%), Query Frame = 0
Query:    1 QGSRFFVGRSGATLGRRQTNTIAF------SHESNGSVMGIDASISGEHARVEYNEDGDYLYIMDGTPSKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTVRFSVALETMVVEKEI 112
            QG  F +G  GATLGR+ TN IA       +      +  +D +IS EHARV Y++     +I DGT  KPSTNGTW RLSG H+ES P+ +  GAEIL+GTVRF V     + E+++
Sbjct:   60 QGKAFVIGPEGATLGRKATNQIALYMKVMDTQTGEERIANVDTAISSEHARVIYDDSTSCFFISDGTSGKPSTNGTWFRLSGPHQESPPHLIEGGAEILVGTVRFVVKESMTISERKL 177          
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Match: A0A7S3MFD7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFD7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 9.900e-24
Identity = 60/131 (45.80%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    1 QGSRFFVGRSGATLGRRQTNTIAFSHE---SNGS--VMGIDASISGEHARVEYNEDGDYLYIMDGTPSKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTVRFSVALETMVVEKEITASNRDHFMSLAAK 126
            QG  F V + GA +GR+ TNTI    +    NG   VM +D +IS EHAR+E+       +I DGT  KPSTNGTW RLSG H+ES  + LS G E+LIGTVRF V+    + E  + +    +  S AAK
Sbjct:  453 QGHSFIVDKEGAMMGRKATNTIPLLMKIEMENGEERVMNVDTAISSEHARIEFEPATGQFFICDGTVDKPSTNGTWFRLSGPHQESSSHVLSAGVEVLIGTVRFLVSESMTISEHGLDSKGISNSFSEAAK 583          
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Match: W7U452_9STRA (SMAD/FHA domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U452_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.150e-20
Identity = 49/111 (44.14%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    5 FFVGRSGATLGRRQTNTIAFSHESNGSVMGIDASISGEHARVEYNEDGDYLYIMDGT--PSKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTV-RFSVALETMVVEKEI 112
            F VG  GA++GR+Q+NT++ S E  G V+G+D+++SGEH R+EY+ +     ++DG     KPSTNGTW RLS +H  S    +    EIL+G + RFSV+ ET ++E  +
Sbjct:  355 FAVGVEGASIGRKQSNTVSLSQEKGGEVLGLDSAVSGEHCRIEYHHEKGGFVLVDGGLGGDKPSTNGTWTRLSYIHMTSARQKVERDDEILVGGILRFSVSFETFLMESVV 465          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96564.17039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FKS5_ECTSI2.150e-6774.68WD repeat, SAM and U-box domain containing 1 n=1 T... [more]
A0A6H5KH40_9PHAE2.840e-4885.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8M7_9STRA2.010e-4065.18WD repeat, SAM and U-box domain-containing 1 n=1 T... [more]
D7FNJ7_ECTSI2.920e-3466.99Armadillo/beta-catenin repeat family protein / U-b... [more]
A0A7S2NWM2_9STRA9.930e-3254.87Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S1U8M6_9STRA1.010e-2953.10Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UA93_9STRA1.600e-2651.33Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A482RQD8_9ARCH3.080e-2646.61FHA domain-containing protein (Fragment) n=1 Tax=a... [more]
A0A7S3MFD7_9STRA9.900e-2445.80Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W7U452_9STRA1.150e-2044.14SMAD/FHA domain protein n=2 Tax=Monodopsidaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 13..95
e-value: 1.4E-9
score: 38.1
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 12..77
score: 9.3
NoneNo IPR availableGENE3D2.60.200.20coord: 1..112
e-value: 4.2E-14
score: 54.3
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 2..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96564contigH-elongata_contig96564:230..1377 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96564.17039.1mRNA_H-elongata_contig96564.17039.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96564 230..1377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96564.17039.1 ID=prot_H-elongata_contig96564.17039.1|Name=mRNA_H-elongata_contig96564.17039.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=158bp
QGSRFFVGRSGATLGRRQTNTIAFSHESNGSVMGIDASISGEHARVEYNE
DGDYLYIMDGTPSKPSTNGTWLRLSGMHKESGPYTLSNGAEILIGTVRFS
VALETMVVEKEITASNRDHFMSLAAKERRSSPSLTMGAPRREGRGGGIFR
VTSNSGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000253FHA_dom
IPR008984SMAD_FHA_dom_sf