prot_H-elongata_contig95014.16913.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI) HSP 1 Score: 219 bits (559), Expect = 5.490e-64 Identity = 114/144 (79.17%), Postives = 120/144 (83.33%), Query Frame = 0
Query: 1 NFQDFDLDDADGAFARFKTLKYSQHLTFSGRGAGITITPYAAGRMIGASVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLT--------EVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGESL 136
NFQ FDLDD D AFARFKTLK+SQHLTFSGRGAG+TITPYAAGRMIGA+VWRVSWQTEDNDIVYATAYN+ ERHLR SAL TLTRPSVLITDAHN+LT RK RE LISTVMDTVRGGGNVL+PTDTAG L
Sbjct: 236 NFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERHLRASALGTLTRPSVLITDAHNALTGGGMIRKDPSSKRKLREVELISTVMDTVRGGGNVLLPTDTAGRVL 379
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA) HSP 1 Score: 163 bits (413), Expect = 4.370e-44 Identity = 84/138 (60.87%), Postives = 100/138 (72.46%), Query Frame = 0
Query: 2 FQDFDLDDADGAFARFKTLKYSQHLTFS--GRGAGITITPYAAGRMIGASVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLT-EVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGESL 136
F+ F LDDAD AF RF+ LKYSQHL FS GRGAG+TITPYAAG +IG S+WR+ WQT+DNDIVYA +YNH+ E HL A+ TL+RPS++ITDAH LT + + R L V TVR GGNVL+P DTAG L
Sbjct: 161 FKAFTLDDADAAFERFQPLKYSQHLRFSEGGRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEHLNGGAVETLSRPSIMITDAHQVLTMQPKPPRKRASDLTEMVTATVRKGGNVLLPCDTAGRVL 298
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Match: L8GYA6_ACACA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYA6_ACACA) HSP 1 Score: 148 bits (374), Expect = 8.190e-39 Identity = 77/139 (55.40%), Postives = 99/139 (71.22%), Query Frame = 0
Query: 3 QDFD---LDDADGAF--ARFKTLKYSQHLTFSGRGAGITITPYAAGRMIGASVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGESL 136
+DFD LDD D AF RF+ LKYSQH+ +GRGAGI +TPY G MIG +VW+++ +TE+ I+YA YNHK ERHL P+ L TL RP++LITDA N L+ SR+ R+ L+ T M T++G GNVL+PTDTAG L
Sbjct: 71 EDFDVWNLDDVDAAFNEERFEQLKYSQHVRLTGRGAGIELTPYVGGHMIGGTVWKITKETEE--ILYAVDYNHKKERHLNPTVLETLNRPTLLITDAFNGLSTQSSRRSRDMDLLDTTMKTLKGDGNVLLPTDTAGRVL 207
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Match: A0A6B2L931_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L931_9EUKA) HSP 1 Score: 141 bits (356), Expect = 2.570e-38 Identity = 71/135 (52.59%), Postives = 93/135 (68.89%), Query Frame = 0
Query: 2 FQDFDLDDADGAFARFKTLKYSQHLTFSGRGAGITITPYAAGRMIGASVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGESL 136
F F+LDD D AF F LKYSQ T SG+G + ITPYAAG +IG ++W++ +T++ I+YA YNHK ERHL P+ L TLT+P++LITDA N+L SR R+ LI ++ T+R GGNVL+P DTAG L
Sbjct: 111 FTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNSQDSRGNRDSLLIESITSTLRAGGNVLLPVDTAGRVL 243
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Match: B3S6C6_TRIAD (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Trichoplax TaxID=10227 RepID=B3S6C6_TRIAD) HSP 1 Score: 144 bits (364), Expect = 1.670e-37 Identity = 73/139 (52.52%), Postives = 98/139 (70.50%), Query Frame = 0
Query: 1 NFQDFDL---DDADGAFARFKTLKYSQHLTFSGRGAGITITPYAAGRMIGASVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGESL 136
+++DFDL DD D AF+R LKYSQH+ +G+G G+TITPYAAG M+G ++W++ E+ DI+YA YNHK ERHL S L TLT PS+LITDA+N+ R+ R+ +LIS V++ +R GGNVL+ DTAG L
Sbjct: 107 DYEDFDLFSLDDIDDAFSRITALKYSQHVHLTGKGNGLTITPYAAGHMVGGTIWKIIKDGEE-DIIYAVDYNHKKERHLNGSVLETLTHPSLLITDAYNAQYNQAKRRDRDQKLISRVLNALRSGGNVLIAVDTAGRVL 244
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Match: A0A6B2KYM6_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM6_9EUKA) HSP 1 Score: 141 bits (356), Expect = 2.110e-36 Identity = 71/135 (52.59%), Postives = 93/135 (68.89%), Query Frame = 0
Query: 2 FQDFDLDDADGAFARFKTLKYSQHLTFSGRGAGITITPYAAGRMIGASVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGESL 136
F F+LDD D AF F LKYSQ T SG+G + ITPYAAG +IG ++W++ +T++ I+YA YNHK ERHL P+ L TLT+P++LITDA N+L SR R+ LI ++ T+R GGNVL+P DTAG L
Sbjct: 111 FTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNSQDSRGNRDSLLIESITSTLRAGGNVLLPVDTAGRVL 243
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Match: A0A6U9RRA8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RRA8_9CHLO) HSP 1 Score: 140 bits (354), Expect = 3.780e-36 Identity = 67/131 (51.15%), Postives = 93/131 (70.99%), Query Frame = 0
Query: 2 FQDFDLDDADGAFARFKTLKYSQHLTFSGRGAGITITPYAAGRMIGASVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTA 132
++ F+L+D D AF F ++Y+Q + +G+G GITITP+ AG +G + WR++ + ED I+YA YNH+ ERHL +AL T RP+VLITDA+N LTE SRK R+ L++ VM T+R GGNVL+P DTA
Sbjct: 122 YETFNLNDVDRAFGMFNPMRYAQQINLTGKGEGITITPFPAGHSVGGTTWRITKEAED--ILYAVDYNHRKERHLNGAALHTFNRPAVLITDAYNGLTEQTSRKLRDRTLVAGVMQTLRSGGNVLIPVDTA 250
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Match: A0A7D9DXS7_PARCT (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Alcyonacea TaxID=40677 RepID=A0A7D9DXS7_PARCT) HSP 1 Score: 140 bits (352), Expect = 7.430e-36 Identity = 71/139 (51.08%), Postives = 97/139 (69.78%), Query Frame = 0
Query: 1 NFQDFDL---DDADGAFARFKTLKYSQHLTFSGRGAGITITPYAAGRMIGASVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGESL 136
N++DF+L DD D AF + LKYSQH++ G+G G+TITPYAAG MIG ++W++ E+ DI+YA YNHK ERHL + L TL+RPS+LITD++N L R+ R+ +L+S ++ T R GGNVL+ DTAG L
Sbjct: 107 NYEDFELFSLDDVDAAFDKIIQLKYSQHVSLKGKGHGLTITPYAAGHMIGGTMWKIVKDGEE-DIIYAVDYNHKKERHLNGAVLETLSRPSLLITDSYNVLNMQARRRDRDTQLMSQILKTTRRGGNVLLTVDTAGRIL 244
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Match: UPI001F043033 (cleavage and polyadenylation specificity factor subunit 2-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F043033) HSP 1 Score: 139 bits (351), Expect = 1.020e-35 Identity = 72/139 (51.80%), Postives = 95/139 (68.35%), Query Frame = 0
Query: 1 NFQDFDL---DDADGAFARFKTLKYSQHLTFSGRGAGITITPYAAGRMIGASVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGESL 136
N++DF+L DD D AF LKYSQH+ G+G G+TITPYAAG MIG ++W++ E+ DIVYA YNHK ERHL + L TL+RPS+LITD++N L R+ R+ +L+S ++ T R GGNVL+ DTAG L
Sbjct: 107 NYEDFELFSLDDVDAAFENIVQLKYSQHVNLKGKGHGLTITPYAAGHMIGGTMWKIVKDGEE-DIVYAVDYNHKKERHLNGAVLETLSRPSLLITDSYNVLNMQARRRDRDTQLMSQILKTTRRGGNVLLAIDTAGRVL 244
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Match: A0A2R6XNT6_MARPO (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XNT6_MARPO) HSP 1 Score: 139 bits (349), Expect = 1.880e-35 Identity = 68/136 (50.00%), Postives = 91/136 (66.91%), Query Frame = 0
Query: 1 NFQDFDLDDADGAFARFKTLKYSQHLTFSGRGAGITITPYAAGRMIGASVWRVSWQTEDNDIVYATAYNHKTERHLRPSALSTLTRPSVLITDAHNSLTEVMSRKYREGRLISTVMDTVRGGGNVLMPTDTAGESL 136
NF F+LDD D AF LKYSQH G+G GITITPYAAGR++G +VW+++ TED I+YA +NH+ ERHL + L + RP+VLITD++N+L +K R+ + VM +R GGNVL+P +TAG L
Sbjct: 127 NFDLFNLDDVDTAFGNSVQLKYSQHHLLQGKGEGITITPYAAGRLLGGTVWKITVDTED--IIYAVDFNHRKERHLNGTVLQSFVRPAVLITDSYNALNNQPLQKQRDAEFLDVVMKALRAGGNVLLPVETAGRVL 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95014.16913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig95014.16913.1 ID=prot_H-elongata_contig95014.16913.1|Name=mRNA_H-elongata_contig95014.16913.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bpback to top |