mRNA_H-elongata_contig94837.16897.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Match: A0A7S3QLF0_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QLF0_DUNTE) HSP 1 Score: 154 bits (390), Expect = 4.180e-45 Identity = 70/143 (48.95%), Postives = 90/143 (62.94%), Query Frame = 1
Query: 1 QQAIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLSL-PVCQRCECRGFDFVPSRPEEIGEWWLLRRPDFDASEWRAKCRCGHSHDAHHPVRRSCGSCNCGEFLSSYGCVVCDS----HQVLFNLMTYKRVAG 414
+QAI TG+YVT+RS +DC RVG S+CFCG Y H F S+ P C CEC GF F+P RPEE+G+WWL+RR F+ WRAKC+CGHSH+ HHP R+ C C C +F S++ C+ CD H+ F + AG
Sbjct: 35 EQAISTGMYVTFRS-SPRMDCTRVGPHSKCFCGHLYSEHSFISKKSVYPRCHNCECTGFQFIPRRPEEVGDWWLVRRKGFNVHTWRAKCKCGHSHEEHHPTRKRC-QCGCPQFQSNFACLACDKKWEDHETFFETTADRMAAG 175
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Match: A0A7S3VH60_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VH60_DUNTE) HSP 1 Score: 154 bits (390), Expect = 1.420e-42 Identity = 70/143 (48.95%), Postives = 90/143 (62.94%), Query Frame = 1
Query: 1 QQAIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLSL-PVCQRCECRGFDFVPSRPEEIGEWWLLRRPDFDASEWRAKCRCGHSHDAHHPVRRSCGSCNCGEFLSSYGCVVCDS----HQVLFNLMTYKRVAG 414
+QAI TG+YVT+RS +DC RVG S+CFCG Y H F S+ P C CEC GF F+P RPEE+G+WWL+RR F+ WRAKC+CGHSH+ HHP R+ C C C +F S++ C+ CD H+ F + AG
Sbjct: 35 EQAISTGMYVTFRS-SPRMDCTRVGPHSKCFCGHLYSEHSFISKKSVYPRCHNCECTGFQFIPRRPEEVGDWWLVRRKGFNVHTWRAKCKCGHSHEEHHPTRKRC-QCGCPQFQSNFACLACDKKWEDHETFFETTADRMAAG 175
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Match: A0A150FWK8_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FWK8_GONPE) HSP 1 Score: 149 bits (377), Expect = 1.650e-42 Identity = 70/143 (48.95%), Postives = 86/143 (60.14%), Query Frame = 1
Query: 1 QQAIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLS-LPVCQRCECRGFDFVPSRPEEIGEWWLLRRPDFDASEWRAKCRCGHSHDAHHPVRRSCGSCNCGEFLSSYGCVVCD----SHQVLFNLMTYKRVAG 414
Q A++TG+Y WRS K DC R+ SRCFC SY H F S PVC+ C CR F F+PSRPEE+GEWWL RR F+ WRAKCRCGH HD H P R C C C F+S++ C+ CD H+ +F + +AG
Sbjct: 35 QMAMETGIYGVWRSSK-GTDCTRIAPTSRCFCNHSYAEHFFVSPKSPYPVCKGCSCRAFAFIPSRPEEVGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPTHRRC-RCGCPAFISNFACLACDLKWEDHETVFETAQERLIAG 175
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Match: A0A835SDR5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SDR5_9CHLO) HSP 1 Score: 146 bits (368), Expect = 8.460e-42 Identity = 70/143 (48.95%), Postives = 86/143 (60.14%), Query Frame = 1
Query: 1 QQAIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLS-LPVCQRCECRGFDFVPSRPEEIGEWWLLRRPDFDASEWRAKCRCGHSHDAHHPVRRSCGSCNCGEFLSSYGCVVCD----SHQVLFNLMTYKRVAG 414
Q A++TG+Y WRS K DC R+G +RCFC + H F S P+C+ C CRGF F+PSRPEEIGEWWL RR F+ WRAKCRCGH HD H P R C C C F S++ C+ CD H+ +F + VAG
Sbjct: 10 QLAMQTGIYGVWRSAKGG-DCTRIGPKARCFCDHPFADHFFVSPKSPYPICKSCNCRGFAFIPSRPEEIGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPHTRRC-RCGCPAFTSNFACLACDLKWEDHETVFETARERLVAG 150
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Match: A0A7S0WIW7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WIW7_9CHLO) HSP 1 Score: 142 bits (358), Expect = 3.180e-40 Identity = 67/143 (46.85%), Postives = 86/143 (60.14%), Query Frame = 1
Query: 1 QQAIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLSL-PVCQRCECRGFDFVPSRPEEIGEWWLLRRPDFDASEWRAKCRCGHSHDAHHPVRRSCGSCNCGEFLSSYGCVVCDS----HQVLFNLMTYKRVAG 414
QQAI+TG+YV +R+ DC RVG S+CFCG Y H F S+ P C C CR F FVP RPEE+G+WWL+RR F+ WRAKCRCGH H+ H P + C C C F+S++ C+ CD H+ +F + AG
Sbjct: 36 QQAIETGLYVVYRN-NNGQDCTRVGPSSKCFCGHYYRDHAFATRKSVYPHCASCACRAFAFVPQRPEEVGDWWLVRRKGFNVHTWRAKCRCGHPHEEHDPNTKRC-RCGCAVFVSNFACLACDKKWEDHETVFETTQERLAAG 176
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Match: A0A0G4EG44_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG44_VITBC) HSP 1 Score: 142 bits (358), Expect = 3.320e-39 Identity = 67/142 (47.18%), Postives = 85/142 (59.86%), Query Frame = 1
Query: 7 AIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLSL-PVCQRCECRGFDFVPSRPEEIGEWWLLRRPDFDASEWRAKCRCGHSHDAHHPVRR-SCGSCNCGEFLSSYGCVVCDSH----QVLFNLMTYKRVAG 414
AI+TG Y WRS T DC R+ S+CFCG HEF+ +L P C CEC+ + FVP+RPEE+GEWWL RRP FD WRAKC+C H+H+ H P R C C C F S++ C+ CD H + +F +R AG
Sbjct: 43 AIETGQYAVWRSC-TGNDCFRIAPHSKCFCGHPLSSHEFKNSRALWPHCTMCECKAYAFVPTRPEEVGEWWLPRRPGFDVRTWRAKCKCKHTHEEHMPNRPYRCRKCPCSTFTSAFLCIACDKHWEDHETVFESEAERRAAG 183
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Match: A0A1R2CZY6_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CZY6_9CILI) HSP 1 Score: 140 bits (353), Expect = 5.330e-39 Identity = 59/122 (48.36%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 7 AIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLSLPVCQRCECRGFDFVPSRPEEIGEWWLLRRPDFDASEWRAKCRCGHSHDAHHPVRRSCGSCNCGEFLSSYGCVVCDSH 372
AI+ G+Y+TWR + DC RVG S+CFCG +E H R+ + C C+C F F+P RPEE+GEWWL RR +FD +R KC+C H+H+ H PV SC C+C F S++ C+VCD H
Sbjct: 54 AIENGLYITWRIPSSRQDCTRVGPGSKCFCGHMFEGHNLRKRTN--PCNECKCNSFKFIPQRPEEVGEWWLPRRKEFDIRTYRVKCKCNHTHEEHDPVSTSCRLCSCYNFNSNFLCLVCDKH 173
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Match: A0A835SEC1_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SEC1_9CHLO) HSP 1 Score: 146 bits (368), Expect = 6.450e-39 Identity = 70/143 (48.95%), Postives = 86/143 (60.14%), Query Frame = 1
Query: 1 QQAIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLS-LPVCQRCECRGFDFVPSRPEEIGEWWLLRRPDFDASEWRAKCRCGHSHDAHHPVRRSCGSCNCGEFLSSYGCVVCD----SHQVLFNLMTYKRVAG 414
Q A++TG+Y WRS K DC R+G +RCFC + H F S P+C+ C CRGF F+PSRPEEIGEWWL RR F+ WRAKCRCGH HD H P R C C C F S++ C+ CD H+ +F + VAG
Sbjct: 10 QLAMQTGIYGVWRSAKGG-DCTRIGPKARCFCDHPFADHFFVSPKSPYPICKSCNCRGFAFIPSRPEEIGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPHTRRC-RCGCPAFTSNFACLACDLKWEDHETVFETARERLVAG 150
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Match: A0A835W432_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835W432_CHLIN) HSP 1 Score: 145 bits (366), Expect = 1.550e-38 Identity = 68/143 (47.55%), Postives = 86/143 (60.14%), Query Frame = 1
Query: 1 QQAIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLS-LPVCQRCECRGFDFVPSRPEEIGEWWLLRRPDFDASEWRAKCRCGHSHDAHHPVRRSCGSCNCGEFLSSYGCVVCD----SHQVLFNLMTYKRVAG 414
Q A++TG+Y WRS K DC R+G +RCFC + H F S P+C+ C CRGF F+PSRPEE+GEWWL RR F+ WRAKCRCGH HD H P R C C C F S++ C+ CD H+ +F + + AG
Sbjct: 10 QLAMQTGIYGVWRSAK-GTDCTRIGPTARCFCNHPFSDHFFVSPKSPYPICKGCTCRGFAFIPSRPEEVGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPHTRRC-RCGCPVFTSNFACLACDLKWEDHETVFETLRERLAAG 150
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Match: A0A6S7HGK8_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HGK8_PARCT) HSP 1 Score: 137 bits (345), Expect = 1.230e-36 Identity = 66/145 (45.52%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 4 QAIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLSLPV-CQRCECRGFDFVPSRPEEIGEWWLLRRPDFDASEWRAKCRCGHSHDAHHPVR-RSCG--SCNCGEFLSSYGCVVCD----SHQVLFNLMTYKRVAG 414
+AI+TG+Y+ WR + DC RVG S+CFCG H G S+ V C+ CEC+ F FVP+R EE+GEWWL RR +FD S WRAKC+C H+H+ H P R C SC C F S++ C CD H+ +F ++R+ G
Sbjct: 147 EAIETGIYIGWRCPEFKHDCIRVGKSSKCFCGHFLSEHSSYHGNSVNVPCRACECKAFAFVPARTEEVGEWWLQRRRNFDPSTWRAKCKCKHTHEEHSPTNPRRCRVKSCPCAGFHSAFLCAACDRHWEQHETVFESAEHRRLEG 291 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94837.16897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig94837.16897.1 >prot_H-elongata_contig94837.16897.1 ID=prot_H-elongata_contig94837.16897.1|Name=mRNA_H-elongata_contig94837.16897.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp QQAIKTGVYVTWRSLKTDLDCARVGFMSRCFCGCSYEMHEFRRGLSLPVCback to top mRNA from alignment at H-elongata_contig94837:714..2156+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig94837.16897.1 ID=mRNA_H-elongata_contig94837.16897.1|Name=mRNA_H-elongata_contig94837.16897.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1443bp|location=Sequence derived from alignment at H-elongata_contig94837:714..2156+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig94837:714..2156+ >mRNA_H-elongata_contig94837.16897.1 ID=mRNA_H-elongata_contig94837.16897.1|Name=mRNA_H-elongata_contig94837.16897.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=828bp|location=Sequence derived from alignment at H-elongata_contig94837:714..2156+ (Himanthalia elongata Himel1 dioecious)back to top |