prot_H-elongata_contig94078.16843.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig94078.16843.1
Unique Nameprot_H-elongata_contig94078.16843.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
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BLAST of mRNA_H-elongata_contig94078.16843.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 2.520e-10
Identity = 28/35 (80.00%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:    1 MEAVVPVLTALKHVLEKAHSPILRELMSYFGEILR 35
            ME VVP+LTALKHVLE+AHSP+LRE+MSYFGE+ R
Sbjct: 1375 MEKVVPILTALKHVLERAHSPLLREIMSYFGELFR 1409
[Close]
BLAST of mRNA_H-elongata_contig94078.16843.1 vs. uniprot
Match: A0A6H5JKF8_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF8_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.210e-9
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0 
Query:    1 MEAVVPVLTALKHVLEKAHSPILRELMSYFGEILR 35
            ME VVP+LTALKHVLE++HSP+LRE+M YFGE+ R
Sbjct:  521 MEKVVPILTALKHVLERSHSPLLREIMFYFGELFR 555
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94078.16843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP86_ECTSI2.520e-1080.00Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JKF8_9PHAE4.210e-974.29Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig94078contigH-elongata_contig94078:396..506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig94078.16843.1mRNA_H-elongata_contig94078.16843.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig94078 396..530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig94078.16843.1 ID=prot_H-elongata_contig94078.16843.1|Name=mRNA_H-elongata_contig94078.16843.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
MEAVVPVLTALKHVLEKAHSPILRELMSYFGEILRY*
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