mRNA_H-elongata_contig9404.16837.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Match: D7G2G8_ECTSI (Glucose-methanol-choline oxidoreductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2G8_ECTSI) HSP 1 Score: 511 bits (1315), Expect = 3.100e-173 Identity = 276/518 (53.28%), Postives = 348/518 (67.18%), Query Frame = 1
Query: 1 REEDYRGHWPWKLEDIKVSFESIESEMTLEEPRSSSTVRPSWERMLGEIGCKRASPTAGESSEFNSTSDSRPTWTKEGLGGCANTHTTTKGGERQSAWAAFIDPITAMPNLRFKSDATVSRVIIEQGRAVGIEVSEYVSTWRGG-----HTRLRQLRLANKAAEIVLCCGVFRTPKLLMLSGVGPKEHLEDKGVAVVVDMPHVGANLHDHLVCNTAHLSKSQMTPADFSEDGMHGMVYTSCPLRPESG--------DSDIVMDASGSKVYKRDSIGASSVVLGFLFVDGG-VYRKCVCIMRLLLTQSSFLGAVTNMVLIALLWILMRLTPLGRIVNRSRGVYIALSTVKSRGTVRLAS-RDPSCPPVIDPAYLSHPDDEQAIVAGWRTLQRAKTETATAKAVLGYELLPGKGFNHGRDDKSFLNYFKRTALTFFHPVGTCRMGQGPEDSVVSADSLRVHGVLGLRVADASVAPRIPTVPTQAMAMMIGDRAAAMALGDMATKGQVQARMFEAASKSVN 1509
REEDY HWPW+L+DI+ SF+SIE+E+TLEE ++ TV PS RML E+G K + SE T PTWT+ GLGGC TTT+GGERQ+AW+AF+ P+T MPNL+ K DA VSRVIIE GRAVG+EV E W TR+RQLRLA AEIV+CCG FR+PKLLMLSGVGP+ HLE+KGV VVVDMPHVG NL DHL+ T+++SK++MT AD++ED H Y SC L E+ + ++ + V+G L DG + R ++ +L + GAV V++A++W+ LTPL RI+ +R + +++VKS+GTVRLAS D + PPVIDP Y SHP D +A++ WRT++RAK ET T +AV G+ELLPGK FN DD+SFL + + L +FHPVGTCRMG+ +DSVVSAD LRVHG+ GLRVADASVAP IP PTQAM MMIGDRAAA+AL D K QV+ARM E AS S+N
Sbjct: 112 REEDYEKHWPWELKDIEASFKSIEAELTLEELPTTGTVAPSCARMLEEVGFKSPPRPSSSRSEDGYT---EPTWTRLGLGGCPMKRTTTRGGERQTAWSAFVRPVTTMPNLKIKDDAAVSRVIIEGGRAVGVEVVESAPGWXXXXXXXXRTRVRQLRLAKDRAEIVVCCGAFRSPKLLMLSGVGPRRHLEEKGVPVVVDMPHVGENLQDHLILATSNISKTRMTEADYTEDSFHSATYFSCALPQEAAAPAGXXXXXXXXXXXXXXXXXSRTEAPSPGAAVVGVLHGDGSFLVRNLSGLITMLFVRPGLFGAVGRGVVLAVIWVATWLTPLTRILRGTRCNVMLVTSVKSKGTVRLASGTDAAAPPVIDPGYFSHPQDRRAMLECWRTIRRAKRETTTGRAVFGFELLPGKKFNDCDDDESFLKFAREFCLPYFHPVGTCRMGREVQDSVVSADDLRVHGISGLRVADASVAPHIPATPTQAMCMMIGDRAAAIALRDRFAKEQVKARMIETASSSIN 626
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Match: L1JH16_GUITC (GMC_OxRdtase_N domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JH16_GUITC) HSP 1 Score: 195 bits (496), Expect = 3.270e-52 Identity = 154/501 (30.74%), Postives = 221/501 (44.11%), Query Frame = 1
Query: 1 REEDYRGHWPWKLEDIKVSFESIESEMTLEE--PRSSSTVRPSWERMLGEIGCKRASPTAGESSEFNSTSDSRPTWTKEGLGGCANTHTTTKG--GERQSAWAAFIDPITAMPNLRFKSDATVSRVIIEQGRAVGIEVSEYVSTWRGGHTRLRQLRLANKAAEIVLCCGVFRTPKLLMLSGVGPKEHLEDKGVAVVVDMPHVGANLHDHLVCNTAHLSKSQMTPADFSEDGMHGMVYTSCPLRPESGDSDIVMDASGSKVYKRDSIGASSVVLGFLFVDGGVYRKCVCIMRLLLTQSSFLGAVTNMVLIALLWILMRLTPLGRIVNRSRGVYIALSTVKSRGTVRLASRDPSCPPVIDPAYLSHPDDEQAIVAGWRTLQRAKTETATAKAVLGYELLPGKGFNHGRDDKSFLNYFKRTALTFFHPVGTCRMGQGPE---------DSVVSADS-LRVHGVLGLRVADASVAPRIPTVPTQAMAMMIGDRAAAMALGDMATK 1461
R EDY+ WPWKLEDI+ FE E + ++ + S + R G CK W ++G+ + T +G G R SAW + P A ++ VSRVI ++ ++VLC G F +PK+L+LSG+G E LE+K V +++ P+VG +L DHL+ A ++ + D ++ G HGM + + I+ S + + S +VLG + R + + +L+ + W+L +S I + +SRG VRL S DP PP+IDP YLS D + W T + KT + + +L ELLPG +G F + K ++FHPVGTCRM G E SV D+ LRVHG +GLR+AD SVAPRIP+ PTQAMA MIG +AA + LG K
Sbjct: 131 RREDYQ-QWPWKLEDIEKGFEFAERSLRVKRVPAKGSGAAMCAMMRESGFKTCKEE------------------LWAEDGV--AEGLYATVQGEAGTRTSAWKELVSPWIAKGRVKVYPHCNVSRVIFDR-------------------------------KKVVLCAGAFDSPKILLLSGIGDPEELEEKTVPPLINNPNVGRHLQDHLILVAAFAARKPLRSCDTNDIGTHGMCHVTIRRESRRRHGQILFKDSWNAWEVLPEL-CSGMVLGQNIGSEVISRVVLIVCKLVFYIPG------------IKWML----------RQSLTAGICMMDPRSRGRVRLRSNDPRDPPLIDPRYLSEESDLVLLHDLWSTFKSVKTSPSAKEWILA-ELLPGAPLMYGESMSWFKWWVKLACSSYFHPVGTCRMPSGKEWETRQSNELSSVSVVDAFLRVHGTVGLRIADCSVAPRIPSAPTQAMAYMIGYQAAQLMLGTRTPK 555
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Match: A0A8I1R2V6_9HYPH (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Bosea sp. TaxID=1871050 RepID=A0A8I1R2V6_9HYPH) HSP 1 Score: 192 bits (487), Expect = 3.750e-51 Identity = 141/396 (35.61%), Postives = 196/396 (49.49%), Query Frame = 1
Query: 262 TTKGGERQSAWAAFIDPITAMPNLRFKSDATVSRVIIEQGRAVGIEVSEYVSTWRGGHTRLRQLRLANKAAEIVLCCGVFRTPKLLMLSGVGPKEHLEDKGVAVVVDMPHVGANLHDHLVCNTAHLSKS-QMTPADFSEDGMHGMVYTSCPLRPESGDSDIVMDASGSKVYKRDSIGASSVVLGFLFVDGGVYRKCVCIMRLLLTQSSFLGAVTNMVLIALLWILMRLTPLGRIVNRSRGVYIALSTVKSRGTVRLASRDPSCPPVIDPAYLSHPDDEQAIVAGWRTLQRAKTETATAKAVLGYELLPGKGFNHGRDDKSFLNYFKRTALTFFHPVGTCRMGQGPEDSVVSADSLRVHGVLGLRVADASVAPRIPTVPTQAMAMMIGDRAAAMALG 1446
TT+GG R+SA AF+ P LR ++DA V+R+++EQ RAVG+EV RGG + + R E+VL G F +P+LL LSG+GP E L G+A + D+P VG NL DHL + + S+ + A S GMV L G + ++ G R + + L F + Y + V +R L+ F G + ++ SRG V + S DP P I P YL+ P+D ++AG R L+R T T A++ E+ PG D+ + L +R A + FHP GTCRMG P +VV A LRVHGV GLRVADAS+ P IP+ A AMM+G+RAAA+ +G
Sbjct: 188 TTRGGRRESAARAFLHPARRRGRLRLETDALVTRILVEQRRAVGVEVH------RGGEIQRYRAR-----REVVLAGGAFNSPQLLQLSGIGPPELLASHGIAPLRDLPAVGRNLQDHLCYDHVYRSRQPSLNEALLSWPARVGMVANY--LLRRRGPLSLSVNQGGGFFRTRPELSRPDMQLYFSPLS---YERAVPGVRALMKPDPFPGF---------------------------SLSVSPCRPASRGHVAIRSPDPRLAPEIAPNYLAEPEDIHTLLAGARFLRRLAA-TPTLAALIDAEIRPGP---EAADEDAHLAAIRRNAYSVFHPCGTCRMGPDPRTAVVDA-RLRVHGVEGLRVADASIFPTIPSGNINAPAMMVGERAAALMMG 535
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Match: UPI000B4AC7EC (choline dehydrogenase n=1 Tax=Lacimicrobium sp. SS2-24 TaxID=2005569 RepID=UPI000B4AC7EC) HSP 1 Score: 182 bits (463), Expect = 9.600e-48 Identity = 134/406 (33.00%), Postives = 201/406 (49.51%), Query Frame = 1
Query: 226 KEGLGGCANTHTTTKGGERQSAWAAFIDPITAMPNLRFKSDATVSRVIIEQGRAVGIEVSEYVSTWRGGHTRLRQLRLANKAAEIVLCCGVFRTPKLLMLSGVGPKEHLEDKGVAVVVDMPHVGANLHDHLVCNTAHLSKSQMTPADFSEDGMHGMVYTSCPLRPESGDSDIVMDASGSKVYKRDSIGASSVVLGFLFVDGGVYRKCVCIMRLLLTQSSFLGAVTNMVLIALLWILMRLTPLGR--IVNRSRGVYIALSTVKSRGTVRLASRDPSCPPVIDPAYLSHPDDEQAIVAGWRTLQRAKTETATAKAVLGYELLPGKGFNHGRDDKSFLNYFKRTALTFFHPVGTCRMGQGPEDSVVSADSLRVHGVLGLRVADASVAPRIPTVPTQAMAMMIGDRAAAM 1437
+EG+G T K G+R S+ A++ P NL + A V+R++ E+GRAVG+E+S GH R+ LA K E++LC G +PKLLMLSG+GP E L + G+ VV D+P VG NL DHL + + G +G+ ++ P + A+ + R + S++ + G + + + L Q FL A+ L G+ + G+++ KSRG +RL R+P+ P+IDP YL+ DD + ++ G + L R + A V G E +PG N RDD++ L + ++ A T +HPVGTCRMGQ + V L+V G+ GLRV DASV P + T A +MI ++AA M
Sbjct: 181 REGVGAY---QVTQKDGQRCSSAKAYLKPAKQRSNLHVITRAPVNRILTEKGRAVGVELSA-----ARGHQRV----LARK--EVILCAGAINSPKLLMLSGIGPAEQLNECGIDVVTDLPGVGQNLQDHLDAIVQYRCQ---------RPGGYGLALSALPS---------YLRAAWQYLCSRQGLFTSNIA------EAGGFARAIASSALADVQFHFLPAI--------------LKEHGKQLVGGYGFGLHVCCLYPKSRGEIRLNPRNPTGAPLIDPRYLADEDDRRVMIEGVK-LARRLLQDAAFDDVDGQEFMPG---NDVRDDEAILAFIRQHAETIYHPVGTCRMGQAADSMTVVTPDLKVKGLDGLRVVDASVMPTLVGGNTNAPVIMIAEKAAEM 530
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Match: A0A316GGZ5_9RHOB (Choline dehydrogenase n=1 Tax=Roseicyclus mahoneyensis TaxID=164332 RepID=A0A316GGZ5_9RHOB) HSP 1 Score: 180 bits (457), Expect = 4.500e-47 Identity = 147/391 (37.60%), Postives = 192/391 (49.10%), Query Frame = 1
Query: 277 ERQSAWAAFIDPITAMPNLRFKSDATVSRVIIEQGRAVGIEVSEYVSTWRGGHTRLRQLRLANKAAEIVLCCGVFRTPKLLMLSGVGPKEHLEDKGVAVVVDMPHVGANLHDHL---VCNTAHLSKSQMTPADFSEDGMHGMVYTSCPLRPESGDSDIVMDASGSKVYKRDSIGASSVVLGFLFVDGGVYRKCVCIMRLLLTQSSFLGAVTNMVLIALLWILMRLTPLGRIVNRSRGVYIALSTVKSRGTVRLASRDPSCPPVIDPAYLSHPDDEQAIVAGWRTLQRAKTETATAKAVLGY---ELLPGKGFNHGRDDKSFLNYFKRTALTFFHPVGTCRMGQGPEDSVVSADSLRVHGVLGLRVADASVAPRIPTVPTQAMAMMIGDRAA 1431
ER S AF+DP+ P L +DA VSR++IE GRAVG+E YV+ GG R ++R + E++L G F +P+LLMLSG+GP +HL G+ VV D+P VG NLHDHL VC A L P SE G+ +YT V D S S + G +VDGG F L P+ L+ +SRGTVRLAS DP PV+DPAYL+ P D + ++ G R + + A KA G EL PG + ++S + Y + +A T +HPVGTCRMG + + V +LRV GV GLRVADAS P I + T A A+MIGD+AA
Sbjct: 197 ERCSTATAFLDPLRNDPRLILVTDAQVSRIVIEGGRAVGVE---YVT---GG--RREEIRASR---EVILTAGAFLSPQLLMLSGIGPADHLRAHGINVVSDLPGVGQNLHDHLLLPVCYRASLVLD--APQLLSEAGI--FLYTG------------VSDRSTSSPDLQFFFGPIQFA-DPQYVDGG---------------PGF-----------------TLVPI-------------LAQPRSRGTVRLASADPMQKPVVDPAYLTDPRDVEVLLRGLRIAR----DLAADKAFDGMRDKELAPG---SDATSEESLVAYIRASASTVWHPVGTCRMGDPTDATTVLDSALRVRGVSGLRVADASAMPMITSGNTNAAAIMIGDKAA 507
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Match: A0A148KNA2_9ALTE (GMC family oxidoreductase n=1 Tax=Paraglaciecola hydrolytica TaxID=1799789 RepID=A0A148KNA2_9ALTE) HSP 1 Score: 178 bits (452), Expect = 3.590e-46 Identity = 126/391 (32.23%), Postives = 195/391 (49.87%), Query Frame = 1
Query: 274 GERQSAWAAFIDPITAMPNLRFKSDATVSRVIIEQGRAVGIEVSEYVSTWRGGHTRLRQLRL---ANKAAEIVLCCGVFRTPKLLMLSGVGPKEHLEDKGVAVVVDMPHVGANLHDHLVCNTAHLSKSQMTPADFSEDGMHGMVYTSCPLRPESGDSDIVMDASGSKVYKRDSIGASSVVLGFLFVDGGVYRKCVCIMRLLLTQSSFLGAVTNMVLIALLWILMRLTPLGR--IVNRSRGVYIALSTVKSRGTVRLASRDPSCPPVIDPAYLSHPDDEQAIVAGWRTLQRAKTETATAKAVLGYELLPGKGFNHGRDDKSFLNYFKRTALTFFHPVGTCRMGQGPEDSVVSADSLRVHGVLGLRVADASVAPRIPTVPTQAMAMMIGDRAA 1431
G+R S+ ++ NL + A V +++I++GRA G+++ +L+Q RL ANK E++LC G +PKLLMLSG+GPKEHL ++G+ +VD+P VG NL DHL + KS+ +G+ ++ P A+ + V+KR + +S++ + G + + Q FL A+ L GR + G+++ KSRG +RL S DP P +I+P YLSHPDD++ +AG R R ++ K G E+ PG + D+ L + + A + +HPVGTC+MGQ + + V ++L V G+ GLRV DASV P + T A +MI +RAA
Sbjct: 195 GQRCSSAKGYLSEAKKRSNLTILTQAVVEKILIDKGRASGVQL------------QLKQQRLSLHANK--EVLLCAGAINSPKLLMLSGIGPKEHLAEQGIDTLVDLPGVGQNLQDHLDVLVQYRCKSRTA---------YGVALSAIPA---------YCKAAFAYVFKRKGMLSSNIA------EAGGFASTAYAGDIPDIQYHFLPAI--------------LEDHGRKNVFGYGYGLHVCALYPKSRGDIRLQSMDPQAPALINPQYLSHPDDQKVAIAGLRQA-REILSSSQFKPYQGKEVSPGPEL---QSDEELLTFIRNKAESIYHPVGTCKMGQVDDPTTVVDENLTVKGIAGLRVVDASVMPTLIGGNTNAPTIMIAERAA 529
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Match: A0A536VLU7_9PROT (Choline dehydrogenase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536VLU7_9PROT) HSP 1 Score: 177 bits (448), Expect = 1.630e-45 Identity = 140/436 (32.11%), Postives = 210/436 (48.17%), Query Frame = 1
Query: 223 TKEGLGGCANTHTTTKGGERQSAWAAFIDPITAMPNLRFKSDATVSRVIIEQGRAVGIEVSEYVSTWRGGHTRLRQLRLANKAAEIVLCCGVFRTPKLLMLSGVGPKEHLEDKGVAVVVDMPHVGANLHDHLVCNTAHLSKSQMTPADFSEDGMHGMVYTSCPLRPESGDSDIVMDASGSKVYKRDSIGASSVVLGFLFVDGGVYRKCVCIMRLLLTQSSFLGAVTNMVLIALLWILMRLTPLGRIVNRSR--------GVYIALSTVKSRGTVRLASRDPSCPPVIDPAYLSHPDDEQAIVAGWRTLQRAKTETATAKAVLGYELLPGKGFNHGRDDKSFLNYFKRTALTFFHPVGTCRMGQGPEDSVVSADSLRVHGVLGLRVADASVAPRIPTVPTQAMAMMIGDRAAAMALGDMATKGQVQARMFEAASKSV 1506
T+EG+G TH K GER SA A++ P A PNLR + A V+R++ E RAVG+E+ + G R++ R E++LC G ++P++LMLSG+GP HL G+ VV D+P VG NLHDH+ D+VM + ++ +D G S V G + V G++ +L T + G L +G++V+ R ++ L KSRG+V LAS DP+ P+IDP +L DD + +V G++ ++R ++ A A GY + D++ + + A T +HP G+CRMG GP D VV A+ LRVHG+ GLRV DASV PR+ + T A +MI ++AA + G +T EA + ++
Sbjct: 176 TQEGVGMYQVTH---KNGERFSAAKAYLTPNLARPNLRVLTGALVTRIVTEGRRAVGVELRD-----ASGLQRVQARR------EVLLCAGALQSPQILMLSGIGPAAHLRAHGIDVVHDLPGVGQNLHDHI---------------------------------------DVVMVVNAPRL--KDLFGLS--VAGLVRVVKGIFEWRRQRSGMLTTNFAEAGGFIKSTPDEATPDLQFHFVVGKLVDHGRKTVFGHGYSCHVCLLRPKSRGSVTLASADPAAAPLIDPNFLHERDDAERLVRGFKLMRRILSQPALA----GYGGRESAASANAVSDEAIERFVRDHADTIYHPAGSCRMGPGPND-VVDAE-LRVHGMQGLRVVDASVMPRVVSGNTNAPTIMIAEKAADLIRGAASTTASSTQPQREATTSAI 548
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Match: UPI001B328A33 (choline dehydrogenase n=1 Tax=Rhodoferax sp. PAMC 29310 TaxID=2822760 RepID=UPI001B328A33) HSP 1 Score: 176 bits (446), Expect = 2.280e-45 Identity = 134/410 (32.68%), Postives = 212/410 (51.71%), Query Frame = 1
Query: 226 KEGLGGCANTHTTTKGGERQSAWAAFIDPITAMPNLRFKSDATVSRVIIEQGRAVGIEVSEYVSTWRGGHTRLRQLRLANKAAEIVLCCGVFRTPKLLMLSGVGPKEHLEDKGVAVVVDMPHVGANLHDH----LVCNTAHLSKSQMTPADFSEDGMHGMVYTSCPLRPESGDSDIVMDASGSKVYKRDSIGASSVVLGFLFVDGGVYRKCVCIMRLLLTQSSFLGAVTNMVLIALLWILMRLTPLGR--IVNRSRGVYIALSTVKSRGTVRLASRDPSCPPVIDPAYLSHPDDEQAIVAGWRTLQRAKTETATAKAVLGYELLPGKGFNHGRDDKSFLNYFKRTALTFFHPVGTCRMGQGPEDSVVSADSLRVHGVLGLRVADASVAPRIPTVPTQAMAMMIGDRAAAM 1437
+EG+G TH K GER SA A++ P + PNL + A +R+++E+ RAVG+E +++QL+ E++LC G ++P++LMLSG+GP+EHL + +A V D+P VG NLHDH LV N ++S + G+ G+ +++ G +L F + G + K +QSS A ++ L +++ +L GR + +++ L +SRG+VRLAS+DP PP+IDP +LS DD ++ G++ ++ ++ A A A+ G+EL + + + F+ + A T +HPV TCRMG+G D VV A LRVHG+ GLRV DAS+ P + + T A +MI ++AA M
Sbjct: 176 QEGVGLYQVTH---KNGERYSAAKAYLTPNLSRPNLHVFTGAHTTRILMERKRAVGVEFQH--------EGQVKQLKATR---EVLLCAGALQSPQILMLSGIGPREHLLENSIATVHDLPGVGQNLHDHPDVVLVTNAPKATESFGLSLSGAIQGLKGLFE-----------------------WRKHRRG----ILTSNFAEAGGFIK---------SQSS--EATPDL---QLHFVVGKLVNHGRTTVFGHGHSLHVCLLRPRSRGSVRLASKDPLAPPLIDPNFLSDRDDMDRMIRGFKLIRNILSQPALA-ALGGHELAASSKVHTDAEIERFVRDY---ADTIYHPVSTCRMGKGALD-VVDAQ-LRVHGIEGLRVVDASIMPNVVSGNTNAPVIMIAEKAADM 524
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Match: A0A2S0US85_9RHOB (Choline dehydrogenase n=1 Tax=Gemmobacter aquarius TaxID=2169400 RepID=A0A2S0US85_9RHOB) HSP 1 Score: 175 bits (443), Expect = 4.350e-45 Identity = 135/390 (34.62%), Postives = 181/390 (46.41%), Query Frame = 1
Query: 274 GERQSAWAAFIDPITAMPNLRFKSDATVSRVIIEQGRAVGIEVSEYVSTWRGGHTRLRQLRLANKAAEIVLCCGVFRTPKLLMLSGVGPKEHLEDKGVAVVVDMPHVGANLHDHLVCNTAHLSKSQMTPADFSEDGMHGMVYTSCPLRPESGDSDIVMDASGSKVYKRDSIGASSVVLGFLFVDGGVYRKCVCIMRLLLTQSSFLGAVTNMVLIALLWILMRLTPLGRIVNRSRGVYIALSTVKSRGTVRLASRDPSCPPVIDPAYLSHPDDEQAIVAGWRTLQRAKTETATAKAVLGYELLPGKGFNHGRDDKSFLNYFKRTALTFFHPVGTCRMGQGPEDSVVSADSLRVHGVLGLRVADASVAPRIPTVPTQAMAMMIGDRAAAMAL 1443
G R S AF+DP+ P L + + +RV+IE G AVG+E YV T +R R E++LC G F +P+LLMLSG+GP E L G+A+V D+P VG NLHDHL+ A+ + + P + G+ S E+ D+ G Y +VDGG F L P+ L+ +SRG+V LAS DP P++DPAYLS P D + +V G + L R + A + EL PG D++ Y + +A T +HPVGTCRMG + + V SLRV GV GLRVADASV P I T A +MIGD+AA + L
Sbjct: 196 GSRCSTATAFLDPLRGDPRLTVLTGSLATRVLIEDGCAVGLE---YVCN--SVTTSIRATR------EVILCAGAFLSPQLLMLSGIGPAETLRTHGIALVADVPGVGQNLHDHLLLPVAYRATADQDPPQLLSEA--GLFTYSGVFDRETNSPDLQF-FFGPIQYADPE-----------YVDGG---------------PGF-----------------TLVPI-------------LAQPRSRGSVTLASADPLTKPLVDPAYLSDPADVEVLVRGVK-LARRLAQDAAFTVLRDRELAPGADI---ASDEALAAYVRASASTVWHPVGTCRMGAADDPTAVVDPSLRVRGVTGLRVADASVMPMITAGNTNAATIMIGDKAADLIL 511
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Match: A0A1A0L9T2_9MYCO (Choline dehydrogenase n=2 Tax=Mycobacterium sp. 1554424.7 TaxID=1834082 RepID=A0A1A0L9T2_9MYCO) HSP 1 Score: 175 bits (443), Expect = 4.660e-45 Identity = 136/404 (33.66%), Postives = 196/404 (48.51%), Query Frame = 1
Query: 241 GCANTHTTTKGGERQSAWAAFIDPITAMPNLRFKSDATVSRVIIEQGRAVGIEVSEYVSTWRGGHTRLRQLRLANKAAEIVLCCGVFRTPKLLMLSGVGPKEHLEDKGVAVVVDMPHVGANLHDHLVCNTAHLSKSQMTPADFSEDGMHGMVYTSCPLRPESGDSDIVMDASGSKVYKRDSIGASSVVLGFLFVDGGVYRKCVCIMRLLLTQSSFLGAVTNMVLIALLWILMRLTPLGRIVNRSRGVYIALSTV--KSRGTVRLASRDPSCPPVIDPAYLSHPDDEQAIVAGWRTLQRAKTETATAKAVLGYELLPGKGFNHGRDDKSFLNYFKRTALTFFHPVGTCRMGQGPEDSVVSADSLRVHGVLGLRVADASVAPRIPTVPTQAMAMMIGDRAAAMALG 1446
G H T GER SAW +F+ P+ P LR + A V RV++E+ +AVG+E S GG ++LR A +E+VL GV +PK+L+LSG+GP HL+ GV +VD+P VG NLHDHL+ + + +K +T +GA++++ + +Y + S + GA N+ L+I + G V G IA V K+RGT+RL S DPS PP+ DP L+ PDD +A+V + R +A K E+ PG + + ++ +R T+ H VGTC+MG + + V LRV GV GLRVADAS+ P I + T A A+MIG+RAA + LG
Sbjct: 183 GVGYNHITAFRGERMSAWKSFVAPMQLHPRLRVTTGAVVHRVLLEKDQAVGVEYS------LGG----QRLRRAYAISEVVLSAGVLGSPKVLLLSGIGPATHLQSVGVTPIVDLPAVGMNLHDHLLVSNIYEAKEPLT------------------------------------------VGANNLL------EAQLYAR----------SSGWQGAAPNL---QPLFIHVPYAADGCPVPE-HGYTIAAGLVAPKARGTLRLVSADPSDPPLADPNVLADPDDLEALVDAVE-ICRDIGASAAFKPWRKGEVAPGSA---AANRNALRDFVRRAVGTYHHQVGTCKMGAADDPNAVVKPDLRVRGVEGLRVADASIMPTITSGNTNAPAIMIGERAADLLLG 510 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9404.16837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9404.16837.1 >prot_H-elongata_contig9404.16837.1 ID=prot_H-elongata_contig9404.16837.1|Name=mRNA_H-elongata_contig9404.16837.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=504bp REEDYRGHWPWKLEDIKVSFESIESEMTLEEPRSSSTVRPSWERMLGEIGback to top mRNA from alignment at H-elongata_contig9404:602..4239+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9404.16837.1 ID=mRNA_H-elongata_contig9404.16837.1|Name=mRNA_H-elongata_contig9404.16837.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3638bp|location=Sequence derived from alignment at H-elongata_contig9404:602..4239+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9404:602..4239+ >mRNA_H-elongata_contig9404.16837.1 ID=mRNA_H-elongata_contig9404.16837.1|Name=mRNA_H-elongata_contig9404.16837.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3024bp|location=Sequence derived from alignment at H-elongata_contig9404:602..4239+ (Himanthalia elongata Himel1 dioecious)back to top |