mRNA_H-elongata_contig93848.16818.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: A0A836C811_9STRA (ArgK protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C811_9STRA) HSP 1 Score: 236 bits (603), Expect = 3.760e-74 Identity = 117/151 (77.48%), Postives = 131/151 (86.75%), Query Frame = 1
Query: 352 VGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
VGIAGPPGAGKS+FIE LG L AG RVAVI+VDPSS+R+GGSILGDKTRM ELSR P AFVR CP+GGVLGGI+ +TH VVLLCQAA YD VIVETVGLGQSEVEVE VD+L L+LPPA GDDLQGSKKGI+E AD +VVNK+DG+L+
Sbjct: 1 VGIAGPPGAGKSTFIEALGLRLVQAGKRVAVISVDPSSLRSGGSILGDKTRMQELSRTPNAFVRACPSGGVLGGIAAHTHSVVLLCQAARYDVVIVETVGLGQSEVEVEQTVDVLTLLLPPASGDDLQGSKKGIIEAADLVVVNKADGELE 151
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: W7TPV1_9STRA (Methylmalonic aciduria type a mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPV1_9STRA) HSP 1 Score: 235 bits (599), Expect = 1.170e-71 Identity = 130/224 (58.04%), Postives = 163/224 (72.77%), Query Frame = 1
Query: 136 TTVESNRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELG-LRVGIAGPPGAGKSSFIEVLGKNLTAAGN-RVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDL 801
T +ES + HR A+ LLD V+ R+ RR R+ + S + + D +G + TS + LRVGIAGPPGAGKS+FIE LGK LT + RVAVI VDPSS R+GGSILGDKTRM+EL++DP+AFVR CP GVLGG++RYT++VVLLCQAA +D V +E+VGLGQSE ++ A DMLLL++PPAGGD+LQG KKGI+EVAD IVVNK+DG L
Sbjct: 68 TLIESTKESHRLDAEALLDHVVYERS-------RRVREKGRLKPGNSTSNAACVAD---EGRIGTSENVRPLRVGIAGPPGAGKSTFIEALGKYLTDSKKLRVAVIAVDPSSSRSGGSILGDKTRMYELAKDPKAFVRACPTSGVLGGVARYTNDVVLLCQAASFDIVFIESVGLGQSETIIDQASDMLLLLVPPAGGDELQGVKKGIMEVADVIVVNKADGHL 281
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: W2HAL9_PHYPR (LAO/AO transport system ATPase, variant 4 n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HAL9_PHYPR) HSP 1 Score: 219 bits (557), Expect = 2.150e-67 Identity = 104/158 (65.82%), Postives = 134/158 (84.81%), Query Frame = 1
Query: 334 PEL-GLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
PEL R+GIAGPPGAGKS+FIE LG LTA G++VAV+ +DPSS R+GGSILGDKTRM +LS DP AFVR P+ G LGG++++T+E+VLLC+A GYD ++VE+VGLGQSE+ ++ VDM++L++ PAGGDDLQG KKGIVE+AD +VVNK+DGDL+
Sbjct: 93 PELTSFRLGIAGPPGAGKSTFIETLGLFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVSPAGGDDLQGQKKGIVEIADIVVVNKADGDLK 250
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: A0A8K1CFL8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFL8_PYTOL) HSP 1 Score: 222 bits (565), Expect = 2.200e-67 Identity = 118/223 (52.91%), Postives = 153/223 (68.61%), Query Frame = 1
Query: 136 TTVESNRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
T VES QA++LLD+VL R R R KL + R+GIAGPPGAGKS+FIE LG+ LT G++VAV+ +DPSS RTGGSILGDKTRM LS DP AFVR P+ G LGG++++T+++VLLC+AAGYD V+VE+VGLGQSE+ ++ VDM++L++PPAGGD+LQGSKKGI+E+AD +VVNK+DGDL+
Sbjct: 39 TLVESTLKSDGEQAELLLDEVLKRR----RDIRNRQTKLQALPS--------------------------FRLGIAGPPGAGKSTFIEALGQYLTKKGHKVAVLAIDPSSSRTGGSILGDKTRMTYLSNDPNAFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIVLVESVGLGQSEIVIDDTVDMVMLLVPPAGGDELQGSKKGIMEIADIVVVNKADGDLK 231
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: A0A2D4BST0_PYTIN (LAO/AO transport system ATPase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BST0_PYTIN) HSP 1 Score: 220 bits (560), Expect = 9.610e-67 Identity = 106/166 (63.86%), Postives = 139/166 (83.73%), Query Frame = 1
Query: 316 GSVETSPELGL---RVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
G S LGL R+GIAGPPGAGKS+FIE LG++LT G++VAV+ +DPSS R+GGSILGDKTRM LS DP AFVR P+ G LGG++++T+++VLLC+AAGYD V+VE+VGLGQSE+ ++ VDM++L++PPAGGD+LQGSKKGI+E+AD IVVNK+DG+L+
Sbjct: 55 GHARQSSSLGLPSFRLGIAGPPGAGKSTFIESLGQHLTERGHKVAVLAIDPSSSRSGGSILGDKTRMTNLSNDPNAFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIVLVESVGLGQSEIIIDDTVDMVMLLVPPAGGDELQGSKKGIMEIADVIVVNKADGELK 220
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: W2LL69_PHYPR (LAO/AO transport system ATPase, variant 3 n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LL69_PHYPR) HSP 1 Score: 219 bits (557), Expect = 1.210e-66 Identity = 104/158 (65.82%), Postives = 134/158 (84.81%), Query Frame = 1
Query: 334 PEL-GLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
PEL R+GIAGPPGAGKS+FIE LG LTA G++VAV+ +DPSS R+GGSILGDKTRM +LS DP AFVR P+ G LGG++++T+E+VLLC+A GYD ++VE+VGLGQSE+ ++ VDM++L++ PAGGDDLQG KKGIVE+AD +VVNK+DGDL+
Sbjct: 93 PELTSFRLGIAGPPGAGKSTFIETLGLFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVSPAGGDDLQGQKKGIVEIADIVVVNKADGDLK 250
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: G4ZEZ6_PHYSP (AAA domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=G4ZEZ6_PHYSP) HSP 1 Score: 218 bits (556), Expect = 3.230e-66 Identity = 114/222 (51.35%), Postives = 154/222 (69.37%), Query Frame = 1
Query: 136 TTVESNRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDL 801
T VES QA++LLD VL+ RR+ K + V+ + R+GIAGPPGAGKS+FIE LG+ LTA G++VAV+ +DPSS R+GGSILGDKTRM +LS DP AFVR P+ G LGG++++T+++VLLC+A GYD ++VE+VGLGQSE+ ++ VDM++L++PPAGGD+LQG KKGIVE+AD +VVNK+DG+L
Sbjct: 25 TLVESTLKSDEEQAELLLDSVLAQ---------RRSLKPA---------------------HVDQAGLTSFRLGIAGPPGAGKSTFIETLGQFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNDIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVPPAGGDELQGQKKGIVEIADIVVVNKADGEL 216
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: H3GW23_PHYRM (AAA domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3GW23_PHYRM) HSP 1 Score: 219 bits (557), Expect = 4.500e-66 Identity = 114/222 (51.35%), Postives = 154/222 (69.37%), Query Frame = 1
Query: 136 TTVESNRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDL 801
T VES QA++LLD VL+ RR+ K + V+++ R+GIAGPPGAGKS+FIE LG+ LTA G++VAV+ +DPSS R+GGSILGDKTRM +LS DP AFVR P G LGG++++T+++VLLC+A GYD ++VE+VGLGQSE+ ++ VDM++L++PPAGGD+LQG KKGIVE+AD +VVNK+DG+L
Sbjct: 50 TLVESTLKSDEEQAELLLDSVLAQ---------RRSLKPT---------------------HVDSAGLTSFRLGIAGPPGAGKSTFIETLGQLLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPTRGTLGGVAQHTNDIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVPPAGGDELQGQKKGIVEIADIVVVNKADGEL 241
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: A0A8J4ZXX0_9CHEL (Methylmalonic aciduria type A, mitochondrial n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZXX0_9CHEL) HSP 1 Score: 219 bits (557), Expect = 7.790e-66 Identity = 108/211 (51.18%), Postives = 144/211 (68.25%), Query Frame = 1
Query: 169 HQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDL 801
HQ L + + + P + LS IL + + ++ R+G++GPPGAGKS+FIE +GK LTA G++VAV+ VDPSS TGGS+LGDKTRMHEL+RDP AF+R PA G LGG++R T+E ++LC+ AGYD +IVETVG+GQSE +V VDM L++PPAGGD+LQG K+GIVE++D I+VNK+DGDL
Sbjct: 64 HQRSTLAESITLVESIHPVKKKQAKLLLSSILSRFKSKEIE----------TSSTSSFSFRIGLSGPPGAGKSTFIEAIGKFLTAQGHKVAVLAVDPSSSTTGGSLLGDKTRMHELTRDPNAFIRPSPASGHLGGVTRTTNESIVLCETAGYDIIIVETVGVGQSEFKVADMVDMFCLLIPPAGGDELQGIKRGIVELSDLIIVNKADGDL 264
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: A0A5D6Y0Y2_9STRA (AAA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0Y2_9STRA) HSP 1 Score: 218 bits (556), Expect = 8.380e-66 Identity = 115/223 (51.57%), Postives = 154/223 (69.06%), Query Frame = 1
Query: 136 TTVESNRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
T VES+ QA++LLD VL+ R R + ++ G+ RVGIAGPPGAGKS+FIE LG+ LTA ++VAV+ +DPSS RTGGSILGDKTRM LS DP AFVR P+ G LGG++++T+++VLLC+AAGYD ++VE+VGLGQSE+ ++ VDM++L++PPAGGD+LQGSKKGI+E+AD +VVNK+DG L+
Sbjct: 58 TLVESSLKSDEQQAELLLDAVLTHR----REANAKEKEFRGLPT--------------------------FRVGIAGPPGAGKSTFIETLGQFLTAKNHKVAVLAIDPSSSRTGGSILGDKTRMTYLSNDPHAFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIILVESVGLGQSEIVIDDTVDMVMLLVPPAGGDELQGSKKGIMEIADLVVVNKADGALE 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig93848.16818.1 >prot_H-elongata_contig93848.16818.1 ID=prot_H-elongata_contig93848.16818.1|Name=mRNA_H-elongata_contig93848.16818.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp PQASSLKPPPPPPPPSPPSRPPPCLCLPRALLASKYRICRSLCRRTTVESback to top mRNA from alignment at H-elongata_contig93848:155..2530- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig93848.16818.1 ID=mRNA_H-elongata_contig93848.16818.1|Name=mRNA_H-elongata_contig93848.16818.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2376bp|location=Sequence derived from alignment at H-elongata_contig93848:155..2530- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig93848:155..2530- >mRNA_H-elongata_contig93848.16818.1 ID=mRNA_H-elongata_contig93848.16818.1|Name=mRNA_H-elongata_contig93848.16818.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1620bp|location=Sequence derived from alignment at H-elongata_contig93848:155..2530- (Himanthalia elongata Himel1 dioecious)back to top |