prot_H-elongata_contig9300.16751.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9300.16751.1
Unique Nameprot_H-elongata_contig9300.16751.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length104
Homology
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Match: A0A6H5L7U1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7U1_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 3.370e-10
Identity = 45/130 (34.62%), Postives = 64/130 (49.23%), Query Frame = 0
Query:    2 FVRGSGLKFSVYADANYAVASNDRRSVFGVAVMLGN---------------------------TAIGWKGSTQKCVKTVKCEAECVALCDAFKEALFMRAVLKFLQPELTGMRMNIFGDNEGATAIIDSP 104
            + RGSGL  ++Y DA+YA  + DRRSV G+A  +G                            T +     TQ  V     EAE +A  +  KEALF+RAVL F+ PE++G  + +  DN+GA A++  P
Sbjct:  489 YKRGSGLGLAMYVDASYA-DTEDRRSVPGLATTVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVSHGRMTQSIVSLSSTEAEYIAAEEGVKEALFVRAVLSFVAPEISGS-IQVIEDNQGAIALVQHP 616          
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Match: A0A535F797_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F797_9CHLR)

HSP 1 Score: 62.8 bits (151), Expect = 3.000e-9
Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   13 YADANYAVASNDRRSVFGVAVMLGNTAIGWKGSTQKCVKTVKCEAECVALCDAFKEALFMRAVLKFLQPELT--GMRMN-IFGDNEGATAIIDSP 104
            Y+DA++A  ++DR+S  G A +L    + W    Q+ + T   EAE V LC+A KEA+++R  L+     +   G R   IFGDN+GA  ++ +P
Sbjct: 1173 YSDADFASDTSDRKSTMGYAYLLSGAVVTWASRKQQTISTSTTEAEYVGLCNAAKEAVWIRNFLRDTGRSIYAGGTRATRIFGDNQGALRLVANP 1267          
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Match: A0A329T4J8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4J8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 5.040e-9
Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 0
Query:    1 MFVRGSG-LKFSVYADANYAVASNDRRSVFGVAVMLGNTAIGWKGSTQKCVKTVKCEAECVALCDAFKEALFMRAVLKFLQPELTGMRMNIFGDNEGATAI 100
            ++ RGSG +    Y DA++    +DRRSV GV +M+GN  + +K   Q+ V     EAE +AL    +E L+ RA+LK +  E  G    ++ DN+GA A+
Sbjct:   73 VYQRGSGEVTAQAYTDADWGSNIDDRRSVSGVTIMIGNAPVVFKSKFQRSVALSSAEAEYMALTLCTQEVLWTRAMLKDMGHEQVGAT-RVWEDNQGAIAL 172          
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Match: A0A225VKY6_9STRA (Polyprotein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VKY6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 7.100e-9
Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    1 MFVRGSG-LKFSVYADANYAVASNDRRSVFGVAVMLGNTAIGWKGSTQKCVKTVKCEAECVALCDAFKEALFMRAVLKFL---QPELTGMRMNIFGDNEGATAIIDS 103
            ++ RGSG +K   Y DA +    +DRRSV GV VM+GN  + +K   Q+ V     EAE +AL    +E L+ RA+LK +    PE T     ++ DN+GA A++ +
Sbjct:  310 VYDRGSGGIKAEAYTDAGWGSNIDDRRSVSGVLVMIGNAPVVFKSKFQRTVALSSAEAEYMALSLCTQEVLWGRAMLKDMGHEHPEGT----QVWEDNQGANALVSN 412          
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Match: A0A2P4YS02_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YS02_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.360e-8
Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 0
Query:    7 GLKFSVYADANYAVASNDRRSVFGVAVMLGNTAIGWKGSTQKCVKTVKCEAECVALCDAFKEALFMRAVLKFLQPELTGMRMNIFGDNEGATAI 100
            G+    ++DA++    +DRRSV GV V++GN  + +K   Q+ V     EAE  AL    +E L+MRA+LK +  E  G    I+ DN+GA A+
Sbjct:  128 GVTVEAFSDADWGTNIDDRRSVSGVMVLMGNAPVVFKSKFQRTVALSSAEAEYTALSLCVQEVLWMRAMLKDMGHE-QGNATQIWEDNQGAIAL 220          
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Match: A0A2P4XZB3_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZB3_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.890e-8
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    6 SGLKFSVYADANYAVASNDRRSVFGVAVMLGNTAIGWKGSTQKCVKTVKCEAECVALCDAFKEALFMRAVLKFLQPELTGMRMNIFGDNEGATAI 100
            +GLK   + DA +    +DRRSV G+ VMLGN  + +K   QK V     E E +A+    +E L++RA+LK +     G    I+ DN+GATA+
Sbjct:  628 NGLKVEAFTDAGWGSNIDDRRSVSGIMVMLGNAPVVFKSKFQKTVALSSAEDEYMAVSLCVQEILWLRAMLKDMGIPQEGATQ-IWEDNQGATAL 721          
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Match: A0A507DFC4_9FUNG (DNA-directed DNA polymerase n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DFC4_9FUNG)

HSP 1 Score: 60.1 bits (144), Expect = 2.540e-8
Identity = 36/98 (36.73%), Postives = 51/98 (52.04%), Query Frame = 0
Query:    7 GLKFSVYADANYAVASNDRRSVFGVAVMLGNTAIGWKGSTQKCVKTVKCEAECVALCDAFKEALFMRAVLKFLQPELTGMRMNIFGDNEGATAIIDSP 104
            G  F VYADA++A  + DR+S  G  V +G   + W    Q  V     EAE  AL +A KE L+++++   LQ   T +   I  DN GA  I ++P
Sbjct:  440 GTDFEVYADADWATDTTDRKSRSGFVVKMGQGVVSWASKKQTTVALSSSEAEYYALSEAVKETLWIQSLFHSLQLSFT-IPTIIHEDNRGAQLIAENP 536          
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Match: A0A507D2A2_9FUNG (DNA-directed DNA polymerase n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D2A2_9FUNG)

HSP 1 Score: 60.1 bits (144), Expect = 2.660e-8
Identity = 36/98 (36.73%), Postives = 51/98 (52.04%), Query Frame = 0
Query:    7 GLKFSVYADANYAVASNDRRSVFGVAVMLGNTAIGWKGSTQKCVKTVKCEAECVALCDAFKEALFMRAVLKFLQPELTGMRMNIFGDNEGATAIIDSP 104
            G  F VYADA++A  + DR+S  G  V +G   + W    Q  V     EAE  AL +A KE L+++++   LQ   T +   I  DN GA  I ++P
Sbjct: 1232 GTDFEVYADADWATDTTDRKSRSGFVVKMGQGVVSWASKKQTTVALSSSEAEYYALSEAVKETLWIQSLFHSLQLSFT-IPTIIHEDNRGAQLIAENP 1328          
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Match: A0A0J7JWE0_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7JWE0_LASNI)

HSP 1 Score: 58.5 bits (140), Expect = 3.410e-8
Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 0
Query:   13 YADANYAVASNDRRSVFGVAVMLGNTAIGWKGSTQKCVKTVKCEAECVALCDAFKEALFMRAVLKFLQPELTGMRMN--IFGDNEGATAIIDSP 104
            +ADA++    + RRS  G    + NTAI W    QK V T   EAE VAL +A KEA+ +RA L     E+ G +    I+ DN+GA  +  +P
Sbjct:  104 FADADWGADVDHRRSYTGYVFQMANTAISWMSRKQKSVVTSSTEAEYVALSEAAKEAVHLRAFLS----EIIGKQPATIIYNDNQGADNMAQNP 193          
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3)

HSP 1 Score: 58.2 bits (139), Expect = 1.250e-7
Identity = 33/99 (33.33%), Postives = 51/99 (51.52%), Query Frame = 0
Query:   10 FSVYADANYAVASNDRRSVFGVAVMLGNTAIGWKGSTQKCVKTVKCEAECVALCDAFKEALFMRAVLKFLQPELTGMRMN----IFGDNEGATAIIDSP 104
            FS Y DA++A  S+DR+S+ G  + LGN AI W    Q  +     EAE  A+  A ++ +++R + + L     G   N    +F DN+ A A+   P
Sbjct: 1097 FSAYCDADFASDSDDRKSISGYTLFLGNAAIAWSSKKQTTIALSTTEAEYTAIAHATRQIIWLRNLFQDL-----GYTQNDPTILFSDNQSAIALTQDP 1190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9300.16751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7U1_9PHAE3.370e-1034.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A535F797_9CHLR3.000e-936.84DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A329T4J8_9STRA5.040e-937.62Uncharacterized protein n=2 Tax=Phytophthora cacto... [more]
A0A225VKY6_9STRA7.100e-938.32Polyprotein n=1 Tax=Phytophthora megakarya TaxID=4... [more]
A0A2P4YS02_9STRA1.360e-838.30Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A2P4XZB3_9STRA1.890e-838.95Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A507DFC4_9FUNG2.540e-836.73DNA-directed DNA polymerase n=1 Tax=Synchytrium en... [more]
A0A507D2A2_9FUNG2.660e-836.73DNA-directed DNA polymerase n=1 Tax=Synchytrium en... [more]
A0A0J7JWE0_LASNI3.410e-839.36Retrovirus-related pol polyprotein from transposon... [more]
A0A067T5Q4_GALM31.250e-733.33Integrase catalytic domain-containing protein (Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9300contigH-elongata_contig9300:947..1258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9300.16751.1mRNA_H-elongata_contig9300.16751.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9300 947..1276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9300.16751.1 ID=prot_H-elongata_contig9300.16751.1|Name=mRNA_H-elongata_contig9300.16751.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp
MFVRGSGLKFSVYADANYAVASNDRRSVFGVAVMLGNTAIGWKGSTQKCV
KTVKCEAECVALCDAFKEALFMRAVLKFLQPELTGMRMNIFGDNEGATAI
IDSP
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