prot_H-elongata_contig91851.16640.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig91851.16640.1
Unique Nameprot_H-elongata_contig91851.16640.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length409
Homology
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Match: A0A6H5JNJ8_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNJ8_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 9.730e-122
Identity = 201/397 (50.63%), Postives = 256/397 (64.48%), Query Frame = 0
Query:   16 SKIWRELRKLRD-LPPL-----------QRGRNTYNDYQSFAACNEVRSTLGPCAGLPRKEFLAIFTCLGNGSHLEELVQLLGGSRQ--HPALQYACLIALNGIAELNDRRVDMLTNRGLVCELLSMISSPQPRIITSSNVGLAPAGVVNPAAGAVTAITGLFSSNRTLESEYANLWVELGAVQALICCLEGHVAFDRGDPVTNDLPLCLFLISHSLLAGAADAIPEPEKLRLGTAWLQLFVDAREWIADDAEQMLVNFYTRPNWVGSVVLEIPQQLRVLAVEAAQRCEAEG---GS--WGGDRVHQLALALSCANV--WHQGQFRITSKRCARVGCVHAEQGNGDRGCSQVDVERDMGG----APRLKRCSQCRGVFYCSRECQVAHWRSGHREAC 387
            SKIW+ELRKLRD +PP            Q     Y D+ +FAACNEVR  +G  + LPR +FLAIF  L  G  L+EL++L   SR   HPALQYACL+AL+G+AEL+DRR D+LT   +V EL ++++SP+ R++T ++ G     +VN AAGAVT ITGLF+SN  LE  YA LWVELGAV AL  CLE H  FDR +PV+ DLPLC FLI+ SLLAGAAD++ E +KLRLG AWL +F++A  WIAD+A  +L +FYTRPNW+ ++V  +P++LR  AV AA+ CE EG   GS  W G +  +LALAL C N   W  G   +  +RCA   C   ++     G        D GG    +   KRCSQC  V YCSRECQ A W+  HR+AC
Sbjct:    9 SKIWQELRKLRDDIPPPVDNNTGSNKGDQESSTCYKDFAAFAACNEVRVAIGRSSALPRDQFLAIFRQLVAGPRLDELLELFKFSRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGGVEIVNAAAGAVTTITGLFTSNGPLEPPYAKLWVELGAVSALASCLENHAVFDRSNPVSGDLPLCFFLIATSLLAGAADSVSEEDKLRLGKAWLTVFLEATRWIADEAADLLADFYTRPNWLKNIVERMPEKLRASAVAAARECEREGTGSGSSPWKGGKADRLALALLCGNAYNWDAGG-ELVGRRCAGPRCDRVQKCGHGGGNPHPAASEDEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKK-HRKAC 403          
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Match: A0A6H5KPW0_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW0_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 6.830e-36
Identity = 118/421 (28.03%), Postives = 186/421 (44.18%), Query Frame = 0
Query:   18 IWRELRKLRDLPPLQRGRNTYNDYQSFAACNEVRSTLGPCAGLPRKEFLAIFTCLGNGSHLEELVQLLGGSRQHPALQYACLIALNGIAELNDRRVDMLTNRGLVCELLSMISSPQPRIITSSNVGLAPAGVVNPAAGAVTAITGLFSSNRTLESEYANLWVELGAVQALICCLEGHVAFDRGDPVTNDLPLCLFLISHSLLAGAADAIPEPEKLRLGTAWLQLFVDAREWIADDAEQMLVNFYTRPNWVGSVVLEIPQQLRVLAVEAAQRCEAEGGSWGGDRVHQLALALSCANVWHQG-------------------QFRITSKRCARVGCVHAEQG-------------NGDRG------------------CSQVDVERDMGGAPR-LKRCSQCRGVFYCSRECQVAHWRSGHREAC 387
            +W ++RKLRD  P++     Y D +   A   +   L P +   R+  L+++  + +G  L++L+ L  GS++HPAL+YACL  L  + +L      +L    ++  LL+++   +PRI+  S     P+  + PAA A   ++ L ++   L+  +A  WV LGA+ A+   LE + A         D P+ +F+IS  LL+ A  A+   ++ R+    L L+V+ R W+A  A   L + +  P   G  ++  P +LR  AV+ A+   AEG S GG  V  +A  LS +     G                      +T    A  G V    G                RG                  CS+    R  G      KRC +CR   YCS++CQVAHW+  H+  C
Sbjct:   24 LWDQIRKLRDCAPMEG--EFYPDEEPAKALAAISVALKPWSSASRETLLSMYAKIADGKRLDDLISLFLGSQEHPALRYACLELLGFVGQLKQTHRRLLCRMDVIKTLLTVLE--RPRIVPISPY--CPSNDICPAAEAARVLSVLCAAEGGLKGAHAEEWVSLGALGAISSALEFNAAIPD---YFTDFPMVMFMISGVLLSEAGHAVSLDDRARVAETSLGLWVERRRWVAPYAGS-LGSLFEGP-LRGEALMRAPLELRNQAVKQAEDFIAEGFSLGGWAVRLVAAILSESPADGGGGGDGVAGNXXXXXXXXXXXXXXVTDSASATAGGVGPTSGVSGPVRPSGGKQVPSTRGHLNVVLSDIKRGADAAVLCSRETCGRRQGDVKEGFKRCGRCRTTVYCSKDCQVAHWKEKHKMEC 433          
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Match: A0A836C0P3_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C0P3_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 7.260e-9
Identity = 48/127 (37.80%), Postives = 61/127 (48.03%), Query Frame = 0
Query:  275 PQQLRVLAVEAAQRCEAEGGSWGGDRVH---QLALALSCANVWHQGQFRI-------TSKRCARVGCVHAEQGNGDRGCSQ---VDVERDMGGAPRLKRCSQCRGVFYCSRECQVAHWRSGHREACG 388
            P+ LR+LA  A  R  AE GS+GGD +     LA AL       +G  R+         +   RV  V  E       C     V +        +L++C QCR V YC RECQ AHWR+GH+EACG
Sbjct: 1864 PEALRLLAWHA-WRLGAERGSFGGDVIEWVTALASALETGGTL-EGAVRVGPGSGGGAGEAAGRVAEVLVEAKALLPACGNPTCVSLAGPSEAEQKLQKCGQCRRVSYCCRECQAAHWRAGHKEACG 1988          
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Match: A0A836C0Q2_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C0Q2_9CHLO)

HSP 1 Score: 64.7 bits (156), Expect = 1.790e-7
Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 0
Query:  279 RVLAVEAAQRCEAEGG-SWGGDRVHQLALALSCANVWHQ--GQFRITSKRCARVGCVHAEQGNGDRGCSQVDVERDMGGAPRLKRCSQCRGVFYCSRECQVAHWRSGHREAC 387
            RV AV AA   EA G    GGD   +LA     A ++    G+ R     CA   CV+ E      G S+ D+        +L++C +C  V+YC RECQVAHW++GH++AC
Sbjct:  802 RVTAVSAA--LEAGGVIPAGGDSSEELAARRHRAGLYAAALGRARDHLALCANPACVNLE------GDSEADL--------KLQQCGRCGRVWYCCRECQVAHWKAGHKKAC 897          
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Match: A0A835XEB1_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XEB1_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 2.810e-7
Identity = 48/138 (34.78%), Postives = 55/138 (39.86%), Query Frame = 0
Query:  275 PQQLRVLAVEAAQRCEAEG------------------GSWGGDRVHQLALALSCA---NVWHQGQFRITSKRCARVGCVHAEQGNGDRGCSQ---VDVERDMGGAPRLKRCSQCRGVF-YCSRECQVAHWRSGHREAC 387
            PQQLR L  E   R  A                    G  GG R    + A + A     W  G     +   A      A  G    GCS     ++E D   A  L+ C+ C G   YCSRECQ AHWRSGHREAC
Sbjct:   36 PQQLRSLGAECRARGHAAAAEALAAQLVRWAHGSGPRGGRGGARASAASGAHALAARFGAWFPGLEAAAALLPASPAAARACLG----GCSNPACANLEGDSDAALPLRACAGCGGTASYCSRECQTAHWRSGHREAC 169          
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Match: A0A835XMW0_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XMW0_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 3.660e-7
Identity = 49/148 (33.11%), Postives = 67/148 (45.27%), Query Frame = 0
Query:  262 TRPNWVGSV-----VLEIPQQLRVLAVEAAQRCE----AEGGSWGGDRVHQLALALS----CANVWHQGQFRITS---KRCAR--VGCVHAEQGNGDRGCSQ---VDVERDMGGAPRLKRCSQCRGVFYCSRECQVAHWRSGHREACG 388
            TRP  VG++      +   ++  V+ VEA +R +     E GS+ G   +  A A          W  G F   S    R A+  V    A +  G   CS     ++  D     RL++C +C    YC RECQ AHWRSGH+EACG
Sbjct:    9 TRPEEVGALGASGSAVAWQRKAVVVVVEAMRRVQEDQQGEAGSYAGAATYLAAWAAGEGAEIEAAW--GAFVHNSCLIHRTAQQLVPPAEARRRLGLPACSNPACANLAGDSEAGLRLQQCGRCGRASYCCRECQTAHWRSGHKEACG 154          
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Match: A0A836BNV0_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BNV0_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 3.980e-7
Identity = 51/141 (36.17%), Postives = 60/141 (42.55%), Query Frame = 0
Query:  275 PQQLRVL-----------AVEAAQRCEAEGGSW----------GGDRVHQLALALSCA---NVWHQGQFRITSKRCARVGCVHAEQGNGDRGCSQ---VDVERDMGGAPRLKRCSQCRGVF-YCSRECQVAHWRSGHREAC 387
            PQQLR L           A EAA+   A+   W          GG RV   + A + A     W  G     +   A      A  G    GCS     ++E D   A  L+ C+ C G   YCSRECQ AHWRSGHREAC
Sbjct:  644 PQQLRTLGAECRARGHAAAAEAAEALAAQLVRWAYGSGPRGGRGGARVSAASGAQALAARFGAWFPGLEAAAALLPASPAAARACLG----GCSNPACANLEGDSDAALPLRACAGCGGAASYCSRECQTAHWRSGHREAC 780          
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Match: A0A835XH40_9CHLO (MYND-type domain-containing protein n=3 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XH40_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 4.380e-7
Identity = 52/142 (36.62%), Postives = 58/142 (40.85%), Query Frame = 0
Query:  275 PQQLRVLAVEAAQR---CEAEG---------------GSWGGDRVHQL-----ALALSCA-NVWHQGQFRITSKRCARVGCVHAEQGNGDRGCSQ---VDVERDMGGAPRLKRCSQCRGV-FYCSRECQVAHWRSGHREACG 388
            PQQLR L  E   R    EAE                G  GG           A AL+     W  G     +   A      A  G    GCS     ++E D   A  L+ C+ C G  FYCSRECQ AHWRSGHREACG
Sbjct:  899 PQQLRSLGAECRARGYMAEAEAVEALAAQLVRWVHGSGPRGGRXXXXXXXXXGAQALAARFGAWFPGLEAAAALLPASPAAARARLG----GCSNPTCANLEGDSDAALPLRACAVCGGAAFYCSRECQTAHWRSGHREACG 1036          
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Match: A0A836C254_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C254_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 5.330e-7
Identity = 38/117 (32.48%), Postives = 56/117 (47.86%), Query Frame = 0
Query:  276 QQLRVLAVEAAQRCEAEGGSWGGDRVHQLALALSCANVWH-----QGQFRITSKRCARVGCVHAEQGNGDRGCSQVDVERDMGGAPRLKRCSQCRGVFYCSRECQVAHWRSGHREAC 387
            Q+L  L  E  Q  +   GS    ++++ A+A   A         Q + R     CA   CV+        G S+ DV        +L+RC++C+GV YC RECQ AHW++GH+  C
Sbjct:  712 QELEALVAELEQPHQ---GSMPPRKLNRRAIAAGLAAATKRLAALQAEARALLPACANPACVNLA------GESEADV--------KLQRCARCKGVSYCCRECQTAHWKAGHKAVC 811          
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Match: A0A1Y1I581_KLENI (MYND-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I581_KLENI)

HSP 1 Score: 63.2 bits (152), Expect = 5.650e-7
Identity = 51/165 (30.91%), Postives = 76/165 (46.06%), Query Frame = 0
Query:  227 PEPEKLRLGTAWLQLFVDAREWIADDAEQMLVNFYTRPNWVGSVVLEI---PQQLRVLAVEAAQRCEAEGGSWGGDRVHQLALALSCAN-VWHQGQFRITSKRCARVGCVHAEQGNGDRGCSQVDVERDMGGAPRLKRCSQCRGVFYCSRECQVAHWRSGHREAC 387
            P P   R+  A  QL     + I D +E   V F  R   V +  + I   P +L +   +     E +   WG     +LA A   A+ +W + + +   +RC RV        N  + C Q + +   GG    K+C +  GVFYCSR+CQV HW+ GH++AC
Sbjct:  804 PPPVWPRVFGAVYQLLKVLADVIRDQSEPAFVEF-VRSGGVEAAAVFIDLNPTRLLMCQSDDPNIWETD---WGLRARKRLAEAADLADGLWERAEAKYGLRRCGRVK-------NAFQRCHQRETK---GGT--FKQCGRKCGVFYCSRDCQVNHWKEGHKQAC 952          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig91851.16640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNJ8_9PHAE9.730e-12250.63MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KPW0_9PHAE6.830e-3628.03MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836C0P3_9CHLO7.260e-937.80MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A836C0Q2_9CHLO1.790e-738.39MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A835XEB1_9CHLO2.810e-734.78MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A835XMW0_9CHLO3.660e-733.11MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A836BNV0_9CHLO3.980e-736.17MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A835XH40_9CHLO4.380e-736.62MYND-type domain-containing protein n=3 Tax=Edapho... [more]
A0A836C254_9CHLO5.330e-732.48MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A1Y1I581_KLENI5.650e-730.91MYND-type domain-containing protein n=1 Tax=Klebso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 355..387
e-value: 6.1E-10
score: 39.0
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 340..387
score: 10.877
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 62..209
e-value: 2.0E-5
score: 25.5
NoneNo IPR availableGENE3D3.30.60.180coord: 343..392
e-value: 1.4E-10
score: 42.5
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 355..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig91851contigH-elongata_contig91851:365..1591 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig91851.16640.1mRNA_H-elongata_contig91851.16640.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig91851 363..2568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig91851.16640.1 ID=prot_H-elongata_contig91851.16640.1|Name=mRNA_H-elongata_contig91851.16640.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=409bp
MNMDADKAPIVASICSKIWRELRKLRDLPPLQRGRNTYNDYQSFAACNEV
RSTLGPCAGLPRKEFLAIFTCLGNGSHLEELVQLLGGSRQHPALQYACLI
ALNGIAELNDRRVDMLTNRGLVCELLSMISSPQPRIITSSNVGLAPAGVV
NPAAGAVTAITGLFSSNRTLESEYANLWVELGAVQALICCLEGHVAFDRG
DPVTNDLPLCLFLISHSLLAGAADAIPEPEKLRLGTAWLQLFVDAREWIA
DDAEQMLVNFYTRPNWVGSVVLEIPQQLRVLAVEAAQRCEAEGGSWGGDR
VHQLALALSCANVWHQGQFRITSKRCARVGCVHAEQGNGDRGCSQVDVER
DMGGAPRLKRCSQCRGVFYCSRECQVAHWRSGHREACGLDFASRMFTPPV
SSHYLEQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND
IPR011989ARM-like