prot_H-elongata_contig88893.16398.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88893.16398.1
Unique Nameprot_H-elongata_contig88893.16398.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
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BLAST of mRNA_H-elongata_contig88893.16398.1 vs. uniprot
Match: D7FQI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI4_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 8.290e-53
Identity = 94/131 (71.76%), Postives = 110/131 (83.97%), Query Frame = 0 
Query:    7 DLFDDSE-EVSLVEFDPNHLDMA-EEAGISIKKVDAEGYGVEVEVLSDDVSTVLILSPEEECIGAKLQGFIPREDGGPSALEMHGQLVEGDVLTHLNGSNARLVEFSDILKACRSPDRGGLPRPLVMKFSR 135
            D+ DDS+ EVSL+  D + L+    EAGI +K VDAEG  VEV VLS+DVST L+ +PEEE +GAK+ GF+PREDGG SALEMHGQL+EGDVLTHLNGSNARL++F+DILKACR PDRGGLPRPLVMKFSR
Sbjct:   13 DMDDDSDDEVSLLVVDEDELNTTLNEAGIQVK-VDAEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSR 142
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BLAST of mRNA_H-elongata_contig88893.16398.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 3.020e-48
Identity = 93/134 (69.40%), Postives = 110/134 (82.09%), Query Frame = 0 
Query:    4 ISEDLFDDSE-EVSLVEFDPNHLDMA-EEAGISIKKVDAEGYGVEVEVLSDDVSTVLILSPEEECIGAKLQGFIPREDGGPSALEMHGQLVEGDVLTHLNGSNARLVEFSDILKACRSPDRGGLPRPLVMKFSR 135
            +  D+ DDS+ EVSL+  D + L+    EAGI +K VD EG  VEV VLS+DVST L+ +PEEE +GAK+ GF+PREDGG SALEMHGQL+EGDVLTHLNGSNARL++F+DILKACR PDRGGLPRPLVMKFSR
Sbjct:   10 VDPDMDDDSDDEVSLLVVDEDELNTTLNEAGIQVK-VDKEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSR 142
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88893.16398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQI4_ECTSI8.290e-5371.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZQ7_9PHAE3.020e-4869.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88893contigH-elongata_contig88893:386..2438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88893.16398.1mRNA_H-elongata_contig88893.16398.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88893 386..2438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88893.16398.1 ID=prot_H-elongata_contig88893.16398.1|Name=mRNA_H-elongata_contig88893.16398.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
NGDISEDLFDDSEEVSLVEFDPNHLDMAEEAGISIKKVDAEGYGVEVEVL
SDDVSTVLILSPEEECIGAKLQGFIPREDGGPSALEMHGQLVEGDVLTHL
NGSNARLVEFSDILKACRSPDRGGLPRPLVMKFSR
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