prot_H-elongata_contig88520.16375.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig88520.16375.1
Unique Nameprot_H-elongata_contig88520.16375.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length163
Homology
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BLAST of mRNA_H-elongata_contig88520.16375.1 vs. uniprot
Match: D8LCP7_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP7_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 1.600e-45
Identity = 108/166 (65.06%), Postives = 125/166 (75.30%), Query Frame = 0 
Query:    1 SQTTQVPRGVIDLEAYTDIGVEEATGAIILGPGPD---APPGFRKYYFRPEDARHKKLPPRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVLGKWLSGLHRDRFKVVRDERDAYMNLQEEYMTQMQDTTSAMTEAESERGRLLQGLRAEHAAARATARDGLEQ 163
            S+  +VPRGVIDL+ YT+IGV++ TGAI+LGPG     A  G RK+YF+PE+ R  +           XXXXXXXXXXXXXX         G VLG+WLSGLHR+R+KVVRDERDAYMNLQEEYM+QMQDTTSA TEAE ER R+LQGL+AEHAA RA ARDGLEQ
Sbjct:  137 SKDAEVPRGVIDLDPYTNIGVDQRTGAIVLGPGGSWTVAGQGLRKFYFKPEERRMMRTTAAGGAGANGXXXXXXXXXXXXXXVAKKGDGGGGEVLGEWLSGLHRERYKVVRDERDAYMNLQEEYMSQMQDTTSAKTEAEKERCRVLQGLQAEHAAVRAAARDGLEQ 302
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BLAST of mRNA_H-elongata_contig88520.16375.1 vs. uniprot
Match: A0A6H5JHM0_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM0_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 1.750e-45
Identity = 104/166 (62.65%), Postives = 122/166 (73.49%), Query Frame = 0 
Query:    1 SQTTQVPRGVIDLEAYTDIGVEEATGAIILGPGPD---APPGFRKYYFRPEDARHKKLPPRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVLGKWLSGLHRDRFKVVRDERDAYMNLQEEYMTQMQDTTSAMTEAESERGRLLQGLRAEHAAARATARDGLEQ 163
            S+  +VPRGVIDL+ YT+IGV++ TGAI+LGPG     A  G RK+YF+PE+ R  +               XXXXXXXXXX         G V+G+WLSGLHR+R+KVVRDERDAYMNLQEEYM+QMQDTTSA TEAE ER R+LQGL+AEHAAARA ARDGLEQ
Sbjct:  142 SKDAEVPRGVIDLDPYTNIGVDQRTGAIVLGPGGSWTAAGQGLRKFYFKPEERRVMRATAADGAGANVTAVAXXXXXXXXXXVAKKGDGVGGEVVGEWLSGLHRERYKVVRDERDAYMNLQEEYMSQMQDTTSAKTEAEKERCRVLQGLQAEHAAARAAARDGLEQ 307
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88520.16375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCP7_ECTSI1.600e-4565.06PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JHM0_9PHAE1.750e-4562.65PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig88520contigH-elongata_contig88520:610..2402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig88520.16375.1mRNA_H-elongata_contig88520.16375.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig88520 609..2402 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig88520.16375.1 ID=prot_H-elongata_contig88520.16375.1|Name=mRNA_H-elongata_contig88520.16375.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp
SQTTQVPRGVIDLEAYTDIGVEEATGAIILGPGPDAPPGFRKYYFRPEDA
RHKKLPPRSRNRNRNRCSPRRRGGGGEGGEKEEGDGDGGGVLGKWLSGLH
RDRFKVVRDERDAYMNLQEEYMTQMQDTTSAMTEAESERGRLLQGLRAEH
AAARATARDGLEQ
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