mRNA_H-elongata_contig88017.16330.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Match: A0A6H5J960_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J960_9PHAE) HSP 1 Score: 204 bits (519), Expect = 1.770e-61 Identity = 104/176 (59.09%), Postives = 116/176 (65.91%), Query Frame = 1
Query: 1 KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDHYENMYCVVKGQKHFTLLPPSDVLFLHEQEFPQGRYRRKA--------DGTGFGVEIEEGSVSWIPV---------------------------------DPSCPDLEKYPLFRHASPVSCSVGPG 405
+ND+LRQEFPGLM DVEP L LAREAFGNEPDAVN+WIGD+RSLSAVHKDHYENMYCVV+G+KHFTLLPPSDVLFL+EQE+PQGRYR+++ G GF IPV DP+CPDLEKYPLFR ASPV C VGPG
Sbjct: 198 QNDSLRQEFPGLMEDVEPFLALAREAFGNEPDAVNLWIGDDRSLSAVHKDHYENMYCVVRGEKHFTLLPPSDVLFLYEQEYPQGRYRQRSVDGGEGEGRGGGFXXXXXXXXXXXIPVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPACPDLEKYPLFRFASPVHCRVGPG 373
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Match: A0A8K1CDY8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDY8_PYTOL) HSP 1 Score: 169 bits (427), Expect = 6.430e-49 Identity = 82/157 (52.23%), Postives = 104/157 (66.24%), Query Frame = 1
Query: 1 KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDHYENMYCVVKGQKHFTLLPPSDVLFLHEQEFPQGRYRRKA---------------------DGTGFGVEIEE-GSVSWIPVDPSCPDLEKYPLFRHASPVSCSVGPG 405
+ND+LR EFP L A V P +EL +EAFGN+PDAVN+WIGDER++S +HKDHYENMYCVVKG+KHFTLLPPSDV L+E+E+P RYR ++ D + F V EE G WIPVDP ++++YPL H +P+ C V G
Sbjct: 139 QNDSLRDEFPRLYAQVPPCIELGKEAFGNDPDAVNIWIGDERAVSTMHKDHYENMYCVVKGRKHFTLLPPSDVACLYEREYPSARYRHESTLGQDAYDEATTAAFHSCHPEDTSWFIVPSEETGMTPWIPVDPLRINIKRYPLADHLNPLQCVVEAG 295
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Match: A0A6G0XCV2_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCV2_9STRA) HSP 1 Score: 166 bits (419), Expect = 6.690e-48 Identity = 77/139 (55.40%), Postives = 98/139 (70.50%), Query Frame = 1
Query: 1 KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDHYENMYCVVKGQKHFTLLPPSDVLFLHEQEFPQGRYRRKADGT------------GFGVEIEEGSVS---WIPVDPSCPDLEKYPLFRH 372
+ND+LR++FP LM DV+P ++ A EAFGN P+AVN+WIGDER++S +HKDHYENMYCVV+G+KHFTLLPPSDV FL+E E+P GRY K T + +E++E WIPVDP PD KYPL +H
Sbjct: 125 QNDSLREQFPALMQDVDPMVDFAAEAFGNGPEAVNLWIGDERAVSTMHKDHYENMYCVVRGRKHFTLLPPSDVAFLYETEYPTGRYVHKNTITPRDFNRPCCGHPSWSIEMKEDETETTPWIPVDPLNPDTTKYPLAKH 263
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Match: A0A6A4ZWG8_9STRA (JmjC domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZWG8_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.260e-47 Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 1
Query: 1 KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDHYENMYCVVKGQKHFTLLPPSDVLFLHEQEFPQGRYRRKADGT----------------GFGVEIEEGS--VSWIPVDPSCPDLEKYPLFRHASPVSCSVGPG 405
+ND+LR +FP L+ DV+P L A EAFGN P+AVN+WIGDER++S +HKDHYENMYCVV+G+KHFTLLPPSDV FL+E E+P GRYR + T + + +++ + WIPV+P P +EKYPL +H P+ ++ G
Sbjct: 142 QNDSLRDQFPALVDDVDPMLAFASEAFGNTPEAVNLWIGDERAVSTMHKDHYENMYCVVRGRKHFTLLPPSDVAFLYETEYPTGRYRSTRETTIHDETSTILHECRTHPSWSIAMQDNNDLTPWIPVNPLHPQVEKYPLTKHLQPLVVTLEAG 294
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Match: A0A024UD90_9STRA (JmjC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UD90_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.980e-47 Identity = 75/155 (48.39%), Postives = 102/155 (65.81%), Query Frame = 1
Query: 1 KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDHYENMYCVVKGQKHFTLLPPSDVLFLHEQEFPQGRYRRKADGTGFGVEIEEGSVS--------------------WIPVDPSCPDLEKYPLFRHASPVSCSVGPG 405
+ND+LR +FP L+ DV+P L+ A EAFGN P+AVN+WIGD R++S +HKDHYENMYCVV+G+KHFTLLPPSDV FL+E+EFP GRYR + T ++ S+ WIPVDP P ++++PL +H P+ ++ G
Sbjct: 126 QNDSLRDQFPDLLEDVDPMLDFAAEAFGNSPEAVNLWIGDARAISTMHKDHYENMYCVVRGRKHFTLLPPSDVAFLYEREFPTGRYRHTSS-TSTKSSVDSASIQYPCTNHPSWSIVMKDDEMTPWIPVDPLDPQVDEFPLAKHIQPLHVTIEAG 279
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Match: W4GTP9_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GTP9_9STRA) HSP 1 Score: 163 bits (412), Expect = 8.240e-47 Identity = 75/153 (49.02%), Postives = 103/153 (67.32%), Query Frame = 1
Query: 1 KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDHYENMYCVVKGQKHFTLLPPSDVLFLHEQEFPQGRYRRKADGT----------------GFGVEIEEGS--VSWIPVDPSCPDLEKYPLFRHASPVSCSVGPG 405
+ND+LR +FP L+ DV+P L A EAFGN P+AVN+WIGDER++S +HKDHYENMYCVV+G+KHF+LLPPSDV FL+E E+P GRYR + T + + +++ + WIPV+P P +EKYPL +H P+ ++ G
Sbjct: 125 QNDSLRDQFPALVDDVDPMLAFASEAFGNTPEAVNLWIGDERAVSTMHKDHYENMYCVVRGRKHFSLLPPSDVAFLYETEYPTGRYRSTRETTIHDETPTILHQCRSHPSWSIAMQDNNDLTPWIPVNPLHPQVEKYPLTKHLQPLVVTLEAG 277
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Match: A0A0L0G0H2_9EUKA (JmjC domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G0H2_9EUKA) HSP 1 Score: 157 bits (397), Expect = 2.100e-44 Identity = 73/137 (53.28%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 1 KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDHYENMYCVVKGQKHFTLLPPSDVLFLHEQEFPQGRYRRKADGTGFGVE--IEEGSVSWIPVDPSCPDLEKYPLFRHASPVSCSVGPG 405
+N NL EF L DVE L A EAFG +PDAVN+WIG S S++HKDHYEN+Y V++G+KHFTLLPP+DV +LH QEFP Y + D + V+ + V WIPVD PDL+K+P F+ A+PV C+V PG
Sbjct: 139 QNGNLATEFEALAKDVEEELPFASEAFGQKPDAVNLWIGTHLSTSSLHKDHYENLYVVIQGEKHFTLLPPTDVPYLHTQEFPPAIYSKHTDTHTWSVQPQTDTDKVPWIPVDTDKPDLQKFPKFKLATPVRCTVKPG 275
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Match: A0A662XN30_9STRA (JmjC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XN30_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.430e-44 Identity = 77/162 (47.53%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 1 KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDHYENMYCVVKGQKHFTLLPPSDVLFLHEQEFPQGRYRRKADGTGFGVEI---------------------------EEGSVSWIPVDPSCPDLEKYPLFRHASPVSCSVGPG 405
+ND+LR++FP L DV +ELA+EAFGNEPDAVN+WIGDER++S +HKDHYENMYCVVKGQKHFT+L PS + LHEQEF RY A +G E ++G WIPVDP D+E++PL P+ V G
Sbjct: 150 QNDSLREQFPALFEDVPSCVELAKEAFGNEPDAVNIWIGDERAVSTMHKDHYENMYCVVKGQKHFTMLAPSAIGCLHEQEFASARYHHAASPVHYGDEHNVIDHVATTRFHERYPEHAAWSILSSPDKGDTPWIPVDPLHIDVERFPLAAALKPIEVVVNAG 311
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Match: A0A6A3KDC1_9STRA (JmjC domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KDC1_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.720e-44 Identity = 78/162 (48.15%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 1 KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDHYENMYCVVKGQKHFTLLPPSDVLFLHEQEFPQGRYRRKADGTGFGVEI---------------------------EEGSVSWIPVDPSCPDLEKYPLFRHASPVSCSVGPG 405
+ND+LR++FPGL +V P+++LA EAFGNEP+AVN+WIGDER++S++HKDHYENMYCVVKGQKHFTLLPPS V L+E+ FP RYR A T E ++G WIPVDP D ++YPL +P+ V G
Sbjct: 143 QNDSLREQFPGLFDEVPPAMQLAVEAFGNEPEAVNIWIGDERAVSSMHKDHYENMYCVVKGQKHFTLLPPSAVGCLYERVFPSARYRYSASPTPEDEEHLVKDLVATERFHERYPQHAAWEILSSPDKGDTPWIPVDPLNIDTKRYPLAAALNPIEVVVNAG 304
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Match: A0A485KNB8_9STRA (Aste57867_9582 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNB8_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.160e-43 Identity = 76/149 (51.01%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 1 KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDHYENMYCVVKGQKHFTLLPPSDVLFLHEQEFPQGRYRRKAD--------------GTGFGVEIEEGSVSWIPVDPSCPDLEKYPLFRHASPVSCSVGPG 405
+ND+LR +FP LM DV+ ++ A EAFGN+P+AVN+WIGDER++S +HKDHYENMY VV+G+KHFTLLPPSDV FL+E EFP GRY A ++ E WIPVDP PD YPL +H P+ +V G
Sbjct: 132 QNDSLRVQFPELMPDVDATIAFAAEAFGNDPEAVNLWIGDERAVSTMHKDHYENMYTVVRGRKHFTLLPPSDVAFLYETEFPTGRYVHVASKDTSETLVPSEGHPNWSIRMQEPEDMTPWIPVDPLNPDTTAYPLTKHLVPLEVTVETG 280 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88017.16330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig88017.16330.1 >prot_H-elongata_contig88017.16330.1 ID=prot_H-elongata_contig88017.16330.1|Name=mRNA_H-elongata_contig88017.16330.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp KNDNLRQEFPGLMADVEPSLELAREAFGNEPDAVNVWIGDERSLSAVHKDback to top mRNA from alignment at H-elongata_contig88017:1181..2403+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig88017.16330.1 ID=mRNA_H-elongata_contig88017.16330.1|Name=mRNA_H-elongata_contig88017.16330.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1223bp|location=Sequence derived from alignment at H-elongata_contig88017:1181..2403+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig88017:1181..2403+ >mRNA_H-elongata_contig88017.16330.1 ID=mRNA_H-elongata_contig88017.16330.1|Name=mRNA_H-elongata_contig88017.16330.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=810bp|location=Sequence derived from alignment at H-elongata_contig88017:1181..2403+ (Himanthalia elongata Himel1 dioecious)back to top |