prot_H-elongata_contig87935.16325.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig87935.16325.1
Unique Nameprot_H-elongata_contig87935.16325.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length111
Homology
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BLAST of mRNA_H-elongata_contig87935.16325.1 vs. uniprot
Match: D8LLN8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLN8_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 3.320e-18
Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 0 
Query:    1 GVEGPHPYWPQDEFHAYRAQPPSTY--QQSSVLPLSSTPIPSDDRHINTSKKGNSAATKT--------RFPSLAPTL----GSFRVSGDARAAEAVARARKTWAPPALRTQAVASYGAVPDLEV 110
            G EGP P  P   F +Y AQPP++   + +S+ P         +RH  T+                  RFPSL P L    G+F  +GD RAAEAVA+ARKTWAPP LRT+A+ASYGAVPDLE+
Sbjct:   63 GPEGP-PELPLSNFQSYHAQPPASIPDRHASLPP---------ERHQGTNSXXXXXXXXXXXXXXXXXRFPSLTPALAPAPGTFSANGDTRAAEAVAQARKTWAPPVLRTKAIASYGAVPDLEI 176
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87935.16325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLN8_ECTSI3.320e-1845.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87935contigH-elongata_contig87935:188..520 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87935.16325.1mRNA_H-elongata_contig87935.16325.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig87935 188..520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig87935.16325.1 ID=prot_H-elongata_contig87935.16325.1|Name=mRNA_H-elongata_contig87935.16325.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=111bp
GVEGPHPYWPQDEFHAYRAQPPSTYQQSSVLPLSSTPIPSDDRHINTSKK
GNSAATKTRFPSLAPTLGSFRVSGDARAAEAVARARKTWAPPALRTQAVA
SYGAVPDLEV*
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